Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
CASC4Q6P4E1 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
CASC4Q6P4E1 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
CASC4Q6P4E1 RNU6-457P-201ENST00000363999 107 ntBASIC1.35□□□□□ -2.19
CASC4Q6P4E1 RNU6-926P-201ENST00000384075 107 ntBASIC1.35□□□□□ -2.19
CASC4Q6P4E1 RNU6-1297P-201ENST00000384415 104 ntBASIC1.35□□□□□ -2.19
CASC4Q6P4E1 MIR873-201ENST00000401120 77 ntBASIC1.35□□□□□ -2.19
CASC4Q6P4E1 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.35□□□□□ -2.19
CASC4Q6P4E1 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.35□□□□□ -2.19
CASC4Q6P4E1 RNU7-4P-201ENST00000516961 62 ntBASIC1.35□□□□□ -2.19
CASC4Q6P4E1 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.35□□□□□ -2.19
CASC4Q6P4E1 AL512310.8-201ENST00000550183 120 ntBASIC1.35□□□□□ -2.19
CASC4Q6P4E1 RPL21P9-201ENST00000556149 474 ntBASIC1.35□□□□□ -2.19
CASC4Q6P4E1 CYP3A52P-201ENST00000563326 91 ntBASIC1.35□□□□□ -2.19
CASC4Q6P4E1 MIR4303-201ENST00000581299 66 ntBASIC1.35□□□□□ -2.19
CASC4Q6P4E1 AC091178.2-201ENST00000584401 117 ntBASIC1.35□□□□□ -2.19
CASC4Q6P4E1 UBE2V2P2-201ENST00000587677 504 ntBASIC1.35□□□□□ -2.19
CASC4Q6P4E1 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.35□□□□□ -2.19
CASC4Q6P4E1 AC073349.3-201ENST00000617616 186 ntBASIC1.35□□□□□ -2.19
CASC4Q6P4E1 AL513423.1-201ENST00000621695 132 ntBASIC1.35□□□□□ -2.19
CASC4Q6P4E1 RNU6-961P-201ENST00000363893 105 ntBASIC1.34□□□□□ -2.19
CASC4Q6P4E1 SNORD116-29-201ENST00000384516 83 ntBASIC1.34□□□□□ -2.19
CASC4Q6P4E1 RNU6-376P-201ENST00000384731 106 ntBASIC1.34□□□□□ -2.19
CASC4Q6P4E1 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.34□□□□□ -2.19
CASC4Q6P4E1 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.34□□□□□ -2.19
CASC4Q6P4E1 RNU7-169P-201ENST00000459456 61 ntBASIC1.34□□□□□ -2.19
CASC4Q6P4E1 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.34□□□□□ -2.19
CASC4Q6P4E1 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.34□□□□□ -2.19
CASC4Q6P4E1 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.34□□□□□ -2.19
CASC4Q6P4E1 AL161670.1-201ENST00000554348 137 ntBASIC1.34□□□□□ -2.19
CASC4Q6P4E1 DNAJC19P9-201ENST00000555084 351 ntBASIC1.34□□□□□ -2.19
CASC4Q6P4E1 AC055872.1-201ENST00000570978 278 ntBASIC1.34□□□□□ -2.19
CASC4Q6P4E1 AL162424.1-201ENST00000602325 221 ntBASIC1.34□□□□□ -2.19
CASC4Q6P4E1 SNORD3E-202ENST00000627253 216 ntBASIC1.34□□□□□ -2.19
CASC4Q6P4E1 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.33□□□□□ -2.2
CASC4Q6P4E1 Y_RNA.243-201ENST00000364481 109 ntBASIC1.33□□□□□ -2.2
CASC4Q6P4E1 Y_RNA.267-201ENST00000364679 109 ntBASIC1.33□□□□□ -2.2
CASC4Q6P4E1 RNU6-117P-201ENST00000365415 107 ntBASIC1.33□□□□□ -2.2
CASC4Q6P4E1 Y_RNA.387-201ENST00000383918 102 ntBASIC1.33□□□□□ -2.2
CASC4Q6P4E1 MIR559-201ENST00000385188 96 ntBASIC1.33□□□□□ -2.2
CASC4Q6P4E1 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.33□□□□□ -2.2
CASC4Q6P4E1 ELOCP24-201ENST00000456370 334 ntBASIC1.33□□□□□ -2.2
CASC4Q6P4E1 RPL30P7-201ENST00000479312 323 ntBASIC1.33□□□□□ -2.2
CASC4Q6P4E1 RNU6-341P-201ENST00000516973 96 ntBASIC1.33□□□□□ -2.2
CASC4Q6P4E1 AC023442.1-201ENST00000531247 422 ntBASIC1.33□□□□□ -2.2
CASC4Q6P4E1 MIR4769-201ENST00000584126 77 ntBASIC1.33□□□□□ -2.2
CASC4Q6P4E1 MIR1302-1-201ENST00000637932 143 ntBASIC1.33□□□□□ -2.2
CASC4Q6P4E1 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
CASC4Q6P4E1 SNORA72.1-201ENST00000363485 129 ntBASIC1.32□□□□□ -2.2
CASC4Q6P4E1 Y_RNA.259-201ENST00000364619 101 ntBASIC1.32□□□□□ -2.2
CASC4Q6P4E1 Y_RNA.303-201ENST00000364998 94 ntBASIC1.32□□□□□ -2.2
CASC4Q6P4E1 RNU6-1310P-201ENST00000384153 107 ntBASIC1.32□□□□□ -2.2
CASC4Q6P4E1 MIR660-201ENST00000385235 97 ntBASIC1.32□□□□□ -2.2
CASC4Q6P4E1 RNY4P36-201ENST00000391116 96 ntBASIC1.32□□□□□ -2.2
CASC4Q6P4E1 RNU11-5P-201ENST00000391216 129 ntBASIC1.32□□□□□ -2.2
CASC4Q6P4E1 RNU1-123P-201ENST00000458950 160 ntBASIC1.32□□□□□ -2.2
CASC4Q6P4E1 AC092991.1-201ENST00000477176 376 ntBASIC1.32□□□□□ -2.2
CASC4Q6P4E1 RNU6-1278P-201ENST00000516130 107 ntBASIC1.32□□□□□ -2.2
CASC4Q6P4E1 RNU2-12P-201ENST00000517216 168 ntBASIC1.32□□□□□ -2.2
CASC4Q6P4E1 AC144568.1-201ENST00000520139 137 ntBASIC1.32□□□□□ -2.2
CASC4Q6P4E1 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.32□□□□□ -2.2
CASC4Q6P4E1 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.32□□□□□ -2.2
CASC4Q6P4E1 MIR4778-201ENST00000577635 80 ntBASIC1.32□□□□□ -2.2
CASC4Q6P4E1 MIR3664-201ENST00000579074 99 ntBASIC1.32□□□□□ -2.2
CASC4Q6P4E1 SNORA28-201ENST00000606769 126 ntBASIC1.32□□□□□ -2.2
CASC4Q6P4E1 AL132765.2-201ENST00000610812 351 ntBASIC1.32□□□□□ -2.2
CASC4Q6P4E1 AC025253.1-201ENST00000613623 543 ntBASIC1.32□□□□□ -2.2
CASC4Q6P4E1 AC133104.2-201ENST00000615272 193 ntBASIC1.32□□□□□ -2.2
CASC4Q6P4E1 AC004467.1-201ENST00000615678 330 ntBASIC1.32□□□□□ -2.2
CASC4Q6P4E1 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.32□□□□□ -2.2
CASC4Q6P4E1 AC127459.3-201ENST00000624328 466 ntBASIC1.32□□□□□ -2.2
CASC4Q6P4E1 RNA5SP432-201ENST00000362480 116 ntBASIC1.31□□□□□ -2.2
CASC4Q6P4E1 SNORA1B-201ENST00000362535 133 ntBASIC1.31□□□□□ -2.2
CASC4Q6P4E1 RNA5SP99-201ENST00000364020 114 ntBASIC1.31□□□□□ -2.2
CASC4Q6P4E1 SNORD115-30-201ENST00000364117 82 ntBASIC1.31□□□□□ -2.2
CASC4Q6P4E1 Y_RNA.265-201ENST00000364677 108 ntBASIC1.31□□□□□ -2.2
CASC4Q6P4E1 RNU6-505P-201ENST00000384427 107 ntBASIC1.31□□□□□ -2.2
CASC4Q6P4E1 RNY3P4-201ENST00000384428 101 ntBASIC1.31□□□□□ -2.2
CASC4Q6P4E1 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
CASC4Q6P4E1 Y_RNA.605-201ENST00000410577 105 ntBASIC1.31□□□□□ -2.2
CASC4Q6P4E1 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.31□□□□□ -2.2
CASC4Q6P4E1 CALM2P4-201ENST00000430810 426 ntBASIC1.31□□□□□ -2.2
CASC4Q6P4E1 SUMO1P2-201ENST00000452524 304 ntBASIC1.31□□□□□ -2.2
CASC4Q6P4E1 RPL39P38-201ENST00000467018 153 ntBASIC1.31□□□□□ -2.2
CASC4Q6P4E1 RNU6-1291P-201ENST00000516591 104 ntBASIC1.31□□□□□ -2.2
CASC4Q6P4E1 RNU2-56P-201ENST00000516826 190 ntBASIC1.31□□□□□ -2.2
CASC4Q6P4E1 AP000942.3-201ENST00000603702 160 ntBASIC1.31□□□□□ -2.2
CASC4Q6P4E1 AC106754.2-201ENST00000623006 233 ntBASIC1.31□□□□□ -2.2
CASC4Q6P4E1 AC138305.3-201ENST00000624988 240 ntBASIC1.31□□□□□ -2.2
CASC4Q6P4E1 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
CASC4Q6P4E1 RNU6-490P-201ENST00000362985 107 ntBASIC1.3□□□□□ -2.2
CASC4Q6P4E1 Y_RNA.314-201ENST00000365114 102 ntBASIC1.3□□□□□ -2.2
CASC4Q6P4E1 Y_RNA.361-201ENST00000365515 120 ntBASIC1.3□□□□□ -2.2
CASC4Q6P4E1 SNORA17.3-201ENST00000391159 129 ntBASIC1.3□□□□□ -2.2
CASC4Q6P4E1 RNU5A-5P-201ENST00000411054 116 ntBASIC1.3□□□□□ -2.2
CASC4Q6P4E1 FCF1P4-201ENST00000448326 183 ntBASIC1.3□□□□□ -2.2
CASC4Q6P4E1 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.3□□□□□ -2.2
CASC4Q6P4E1 AC009474.2-201ENST00000451383 136 ntBASIC1.3□□□□□ -2.2
CASC4Q6P4E1 OR9P1P-201ENST00000496431 281 ntBASIC1.3□□□□□ -2.2
CASC4Q6P4E1 AC091951.2-201ENST00000500762 203 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms