Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AL110115.1-201ENST00000614396 364 ntBASIC3.38□□□□□ -1.87
RNF43Q68DV7 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
RNF43Q68DV7 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
RNF43Q68DV7 AC093831.2-201ENST00000624393 3427 ntBASIC3.37□□□□□ -1.87
RNF43Q68DV7 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RNF43Q68DV7 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RNF43Q68DV7 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RNF43Q68DV7 AL035425.3-201ENST00000564206 4996 ntBASIC3.37□□□□□ -1.87
RNF43Q68DV7 RNA5SP173-201ENST00000364857 136 ntBASIC3.37□□□□□ -1.87
RNF43Q68DV7 RNU1-57P-201ENST00000384491 166 ntBASIC3.37□□□□□ -1.87
RNF43Q68DV7 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.37□□□□□ -1.87
RNF43Q68DV7 HMGN2P16-201ENST00000456802 261 ntBASIC3.37□□□□□ -1.87
RNF43Q68DV7 AC112771.1-201ENST00000463581 102 ntBASIC3.37□□□□□ -1.87
RNF43Q68DV7 AC010531.2-201ENST00000465012 153 ntBASIC3.37□□□□□ -1.87
RNF43Q68DV7 AC006445.1-201ENST00000491925 405 ntBASIC3.37□□□□□ -1.87
RNF43Q68DV7 RNA5SP217-201ENST00000515959 91 ntBASIC3.37□□□□□ -1.87
RNF43Q68DV7 RNU6-638P-201ENST00000516582 104 ntBASIC3.37□□□□□ -1.87
RNF43Q68DV7 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.37□□□□□ -1.87
RNF43Q68DV7 MIR2682-201ENST00000580305 110 ntBASIC3.37□□□□□ -1.87
RNF43Q68DV7 HSPE1P7-201ENST00000604681 321 ntBASIC3.37□□□□□ -1.87
RNF43Q68DV7 AL137790.1-201ENST00000634283 177 ntBASIC3.37□□□□□ -1.87
RNF43Q68DV7 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.37□□□□□ -1.87
RNF43Q68DV7 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RNF43Q68DV7 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RNF43Q68DV7 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.36□□□□□ -1.87
RNF43Q68DV7 AC010889.1-201ENST00000566193 2666 ntBASIC3.36□□□□□ -1.87
RNF43Q68DV7 Y_RNA.203-201ENST00000364106 102 ntBASIC3.36□□□□□ -1.87
RNF43Q68DV7 SNORD32B-201ENST00000364460 84 ntBASIC3.36□□□□□ -1.87
RNF43Q68DV7 MIR570-201ENST00000384917 97 ntBASIC3.36□□□□□ -1.87
RNF43Q68DV7 MIR1283-1-201ENST00000408494 87 ntBASIC3.36□□□□□ -1.87
RNF43Q68DV7 EDDM3CP-201ENST00000415977 425 ntBASIC3.36□□□□□ -1.87
RNF43Q68DV7 AC023449.1-201ENST00000454464 154 ntBASIC3.36□□□□□ -1.87
RNF43Q68DV7 SNRPGP3-201ENST00000469405 227 ntBASIC3.36□□□□□ -1.87
RNF43Q68DV7 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.36□□□□□ -1.87
RNF43Q68DV7 AC007751.1-201ENST00000529260 376 ntBASIC3.36□□□□□ -1.87
RNF43Q68DV7 MIR4672-201ENST00000583126 81 ntBASIC3.36□□□□□ -1.87
RNF43Q68DV7 MIR6715A-201ENST00000615929 79 ntBASIC3.36□□□□□ -1.87
RNF43Q68DV7 Pinc.1-201ENST00000616452 154 ntBASIC3.36□□□□□ -1.87
RNF43Q68DV7 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RNF43Q68DV7 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RNF43Q68DV7 AC002546.1-201ENST00000588041 2504 ntBASIC3.35□□□□□ -1.87
RNF43Q68DV7 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RNF43Q68DV7 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
RNF43Q68DV7 MIR488-201ENST00000365739 83 ntBASIC3.35□□□□□ -1.87
RNF43Q68DV7 RNU6-1014P-201ENST00000383940 103 ntBASIC3.35□□□□□ -1.87
RNF43Q68DV7 RNU6-440P-201ENST00000390882 105 ntBASIC3.35□□□□□ -1.87
RNF43Q68DV7 SNORA26-201ENST00000391286 122 ntBASIC3.35□□□□□ -1.87
RNF43Q68DV7 AL590004.2-201ENST00000404787 371 ntBASIC3.35□□□□□ -1.87
RNF43Q68DV7 SNORD11-201ENST00000459124 84 ntBASIC3.35□□□□□ -1.87
RNF43Q68DV7 RN7SL75P-201ENST00000461926 281 ntBASIC3.35□□□□□ -1.87
RNF43Q68DV7 AL365205.2-201ENST00000594586 68 ntBASIC3.35□□□□□ -1.87
RNF43Q68DV7 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.35□□□□□ -1.87
RNF43Q68DV7 MIR1245B-201ENST00000636115 69 ntBASIC3.35□□□□□ -1.87
RNF43Q68DV7 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RNF43Q68DV7 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RNF43Q68DV7 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RNF43Q68DV7 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RNF43Q68DV7 RNU6-117P-201ENST00000365415 107 ntBASIC3.34□□□□□ -1.87
RNF43Q68DV7 SNORA7.4-201ENST00000384249 137 ntBASIC3.34□□□□□ -1.87
RNF43Q68DV7 Y_RNA.486-201ENST00000384398 107 ntBASIC3.34□□□□□ -1.87
RNF43Q68DV7 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
RNF43Q68DV7 RNU6-57P-201ENST00000411348 103 ntBASIC3.34□□□□□ -1.87
RNF43Q68DV7 RPL32P35-201ENST00000415214 394 ntBASIC3.34□□□□□ -1.87
RNF43Q68DV7 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.34□□□□□ -1.87
RNF43Q68DV7 RNU6-221P-201ENST00000459541 99 ntBASIC3.34□□□□□ -1.87
RNF43Q68DV7 RN7SKP43-201ENST00000516173 320 ntBASIC3.34□□□□□ -1.87
RNF43Q68DV7 RNU6-970P-201ENST00000516312 107 ntBASIC3.34□□□□□ -1.87
RNF43Q68DV7 RNA5SP281-201ENST00000516504 135 ntBASIC3.34□□□□□ -1.87
RNF43Q68DV7 RNU7-149P-201ENST00000516739 59 ntBASIC3.34□□□□□ -1.87
RNF43Q68DV7 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.34□□□□□ -1.87
RNF43Q68DV7 MIR2681-201ENST00000581814 105 ntBASIC3.34□□□□□ -1.87
RNF43Q68DV7 MIR4753-201ENST00000585119 83 ntBASIC3.34□□□□□ -1.87
RNF43Q68DV7 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.34□□□□□ -1.87
RNF43Q68DV7 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.34□□□□□ -1.87
RNF43Q68DV7 U6.98-201ENST00000637157 84 ntBASIC3.34□□□□□ -1.87
RNF43Q68DV7 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
RNF43Q68DV7 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.88
RNF43Q68DV7 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
RNF43Q68DV7 AL353746.1-201ENST00000566293 6881 ntBASIC3.33□□□□□ -1.88
RNF43Q68DV7 RNU6-1209P-201ENST00000363655 107 ntBASIC3.33□□□□□ -1.88
RNF43Q68DV7 Y_RNA.796-201ENST00000364268 102 ntBASIC3.33□□□□□ -1.88
RNF43Q68DV7 Y_RNA.799-201ENST00000364992 102 ntBASIC3.33□□□□□ -1.88
RNF43Q68DV7 RNU6-573P-201ENST00000383938 106 ntBASIC3.33□□□□□ -1.88
RNF43Q68DV7 SNORA44-201ENST00000384584 132 ntBASIC3.33□□□□□ -1.88
RNF43Q68DV7 RNU2-32P-201ENST00000411193 191 ntBASIC3.33□□□□□ -1.88
RNF43Q68DV7 AC244505.4-201ENST00000434905 287 ntBASIC3.33□□□□□ -1.88
RNF43Q68DV7 AC107083.1-201ENST00000439643 279 ntBASIC3.33□□□□□ -1.88
RNF43Q68DV7 SSXP5-201ENST00000443473 287 ntBASIC3.33□□□□□ -1.88
RNF43Q68DV7 AC016717.1-201ENST00000448918 286 ntBASIC3.33□□□□□ -1.88
RNF43Q68DV7 AC245102.2-201ENST00000448956 180 ntBASIC3.33□□□□□ -1.88
RNF43Q68DV7 RNU7-14P-201ENST00000459331 62 ntBASIC3.33□□□□□ -1.88
RNF43Q68DV7 RPL39P34-201ENST00000477141 156 ntBASIC3.33□□□□□ -1.88
RNF43Q68DV7 MIR449C-201ENST00000516047 92 ntBASIC3.33□□□□□ -1.88
RNF43Q68DV7 RNA5SP236-201ENST00000516169 116 ntBASIC3.33□□□□□ -1.88
RNF43Q68DV7 RNU6-365P-201ENST00000517113 106 ntBASIC3.33□□□□□ -1.88
RNF43Q68DV7 AC025647.1-201ENST00000517879 253 ntBASIC3.33□□□□□ -1.88
RNF43Q68DV7 MIR3129-201ENST00000581095 76 ntBASIC3.33□□□□□ -1.88
RNF43Q68DV7 uc_338.1-201ENST00000612113 180 ntBASIC3.33□□□□□ -1.88
RNF43Q68DV7 AL035470.1-201ENST00000622571 220 ntBASIC3.33□□□□□ -1.88
RNF43Q68DV7 AC002064.3-201ENST00000623448 346 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 195.9 ms