Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 AL449363.1-201ENST00000617815 186 ntBASIC2.57□□□□□ -2
SLC44A4Q53GD3 snoU18.1-201ENST00000629629 71 ntBASIC2.57□□□□□ -2
SLC44A4Q53GD3 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.57□□□□□ -2
SLC44A4Q53GD3 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
SLC44A4Q53GD3 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SLC44A4Q53GD3 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.56□□□□□ -2
SLC44A4Q53GD3 AL157777.2-201ENST00000258070 137 ntBASIC2.56□□□□□ -2
SLC44A4Q53GD3 Y_RNA.217-201ENST00000364214 105 ntBASIC2.56□□□□□ -2
SLC44A4Q53GD3 RNU6-454P-201ENST00000364292 107 ntBASIC2.56□□□□□ -2
SLC44A4Q53GD3 RNU1-91P-201ENST00000364746 163 ntBASIC2.56□□□□□ -2
SLC44A4Q53GD3 RNU6-918P-201ENST00000391219 106 ntBASIC2.56□□□□□ -2
SLC44A4Q53GD3 MIR300-201ENST00000401138 83 ntBASIC2.56□□□□□ -2
SLC44A4Q53GD3 AL359511.1-201ENST00000402970 211 ntBASIC2.56□□□□□ -2
SLC44A4Q53GD3 MIR1262-201ENST00000408276 93 ntBASIC2.56□□□□□ -2
SLC44A4Q53GD3 MIR1289-2-201ENST00000408360 111 ntBASIC2.56□□□□□ -2
SLC44A4Q53GD3 RNU2-54P-201ENST00000410299 190 ntBASIC2.56□□□□□ -2
SLC44A4Q53GD3 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.56□□□□□ -2
SLC44A4Q53GD3 AL591806.2-201ENST00000433122 173 ntBASIC2.56□□□□□ -2
SLC44A4Q53GD3 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.56□□□□□ -2
SLC44A4Q53GD3 AL137159.1-201ENST00000452808 512 ntBASIC2.56□□□□□ -2
SLC44A4Q53GD3 SNORD2.1-201ENST00000458762 69 ntBASIC2.56□□□□□ -2
SLC44A4Q53GD3 Y_RNA.641-201ENST00000459414 105 ntBASIC2.56□□□□□ -2
SLC44A4Q53GD3 AC010531.2-201ENST00000465012 153 ntBASIC2.56□□□□□ -2
SLC44A4Q53GD3 RNU1-104P-201ENST00000517280 175 ntBASIC2.56□□□□□ -2
SLC44A4Q53GD3 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.56□□□□□ -2
SLC44A4Q53GD3 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
SLC44A4Q53GD3 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SLC44A4Q53GD3 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SLC44A4Q53GD3 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
SLC44A4Q53GD3 U3.8-201ENST00000363675 217 ntBASIC2.55□□□□□ -2
SLC44A4Q53GD3 SNORA38-201ENST00000363946 132 ntBASIC2.55□□□□□ -2
SLC44A4Q53GD3 Y_RNA.329-201ENST00000365209 107 ntBASIC2.55□□□□□ -2
SLC44A4Q53GD3 RNU6-746P-201ENST00000384112 109 ntBASIC2.55□□□□□ -2
SLC44A4Q53GD3 RNU6-1310P-201ENST00000384153 107 ntBASIC2.55□□□□□ -2
SLC44A4Q53GD3 RNU1-148P-201ENST00000384472 162 ntBASIC2.55□□□□□ -2
SLC44A4Q53GD3 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
SLC44A4Q53GD3 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.55□□□□□ -2
SLC44A4Q53GD3 RNU7-57P-201ENST00000459540 60 ntBASIC2.55□□□□□ -2
SLC44A4Q53GD3 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.55□□□□□ -2
SLC44A4Q53GD3 RNU6-406P-201ENST00000516470 107 ntBASIC2.55□□□□□ -2
SLC44A4Q53GD3 NDUFA5P6-201ENST00000542110 379 ntBASIC2.55□□□□□ -2
SLC44A4Q53GD3 MIR4308-201ENST00000580634 81 ntBASIC2.55□□□□□ -2
SLC44A4Q53GD3 AC073349.3-201ENST00000617616 186 ntBASIC2.55□□□□□ -2
SLC44A4Q53GD3 AC021753.1-201ENST00000635724 168 ntBASIC2.55□□□□□ -2
SLC44A4Q53GD3 MIR340-201ENST00000362125 95 ntBASIC2.54□□□□□ -2
SLC44A4Q53GD3 RNU6-324P-201ENST00000363957 106 ntBASIC2.54□□□□□ -2
SLC44A4Q53GD3 SNORA67.1-201ENST00000364749 141 ntBASIC2.54□□□□□ -2
SLC44A4Q53GD3 Y_RNA.332-201ENST00000365271 113 ntBASIC2.54□□□□□ -2
SLC44A4Q53GD3 RNU6-1264P-201ENST00000383891 107 ntBASIC2.54□□□□□ -2
SLC44A4Q53GD3 RNU6-211P-201ENST00000384047 107 ntBASIC2.54□□□□□ -2
SLC44A4Q53GD3 Y_RNA.506-201ENST00000384494 102 ntBASIC2.54□□□□□ -2
SLC44A4Q53GD3 RNU6-125P-201ENST00000384505 107 ntBASIC2.54□□□□□ -2
SLC44A4Q53GD3 RNU6-57P-201ENST00000411348 103 ntBASIC2.54□□□□□ -2
SLC44A4Q53GD3 AC108210.2-201ENST00000503681 201 ntBASIC2.54□□□□□ -2
SLC44A4Q53GD3 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.54□□□□□ -2
SLC44A4Q53GD3 AC234781.5-201ENST00000508429 271 ntBASIC2.54□□□□□ -2
SLC44A4Q53GD3 RNU6-436P-201ENST00000516171 114 ntBASIC2.54□□□□□ -2
SLC44A4Q53GD3 IGLV3-17-201ENST00000519099 244 ntBASIC2.54□□□□□ -2
SLC44A4Q53GD3 MIR1273D-201ENST00000577266 86 ntBASIC2.54□□□□□ -2
SLC44A4Q53GD3 AC072026.1-201ENST00000605023 201 ntBASIC2.54□□□□□ -2
SLC44A4Q53GD3 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.54□□□□□ -2
SLC44A4Q53GD3 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.53□□□□□ -2
SLC44A4Q53GD3 SNORD115-3-201ENST00000363100 82 ntBASIC2.53□□□□□ -2
SLC44A4Q53GD3 Y_RNA.233-201ENST00000364407 101 ntBASIC2.53□□□□□ -2
SLC44A4Q53GD3 RNU6-975P-201ENST00000384296 105 ntBASIC2.53□□□□□ -2
SLC44A4Q53GD3 SNORA19-201ENST00000384737 128 ntBASIC2.53□□□□□ -2
SLC44A4Q53GD3 BTF3P11-201ENST00000426582 477 ntBASIC2.53□□□□□ -2
SLC44A4Q53GD3 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.53□□□□□ -2
SLC44A4Q53GD3 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.53□□□□□ -2
SLC44A4Q53GD3 HMGB3P3-201ENST00000510526 400 ntBASIC2.53□□□□□ -2
SLC44A4Q53GD3 Y_RNA.662-201ENST00000516028 97 ntBASIC2.53□□□□□ -2
SLC44A4Q53GD3 RNU6-1212P-201ENST00000517023 104 ntBASIC2.53□□□□□ -2
SLC44A4Q53GD3 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.53□□□□□ -2
SLC44A4Q53GD3 CYCSP26-201ENST00000534107 320 ntBASIC2.53□□□□□ -2
SLC44A4Q53GD3 AL008718.3-201ENST00000610217 321 ntBASIC2.53□□□□□ -2
SLC44A4Q53GD3 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.53□□□□□ -2
SLC44A4Q53GD3 MIR6895-201ENST00000613497 78 ntBASIC2.53□□□□□ -2
SLC44A4Q53GD3 AL365265.1-201ENST00000621045 234 ntBASIC2.53□□□□□ -2
SLC44A4Q53GD3 MIR764-201ENST00000390811 85 ntBASIC2.52□□□□□ -2.01
SLC44A4Q53GD3 U3.40-201ENST00000408706 208 ntBASIC2.52□□□□□ -2.01
SLC44A4Q53GD3 AC123900.1-201ENST00000420390 96 ntBASIC2.52□□□□□ -2.01
SLC44A4Q53GD3 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SLC44A4Q53GD3 AL392103.1-201ENST00000447000 198 ntBASIC2.52□□□□□ -2.01
SLC44A4Q53GD3 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.52□□□□□ -2.01
SLC44A4Q53GD3 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.52□□□□□ -2.01
SLC44A4Q53GD3 RNU6-1278P-201ENST00000516130 107 ntBASIC2.52□□□□□ -2.01
SLC44A4Q53GD3 RNA5SP281-201ENST00000516504 135 ntBASIC2.52□□□□□ -2.01
SLC44A4Q53GD3 RNU6-789P-201ENST00000517105 102 ntBASIC2.52□□□□□ -2.01
SLC44A4Q53GD3 RNU2-12P-201ENST00000517216 168 ntBASIC2.52□□□□□ -2.01
SLC44A4Q53GD3 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.52□□□□□ -2.01
SLC44A4Q53GD3 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SLC44A4Q53GD3 AC021269.2-201ENST00000532318 330 ntBASIC2.52□□□□□ -2.01
SLC44A4Q53GD3 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.52□□□□□ -2.01
SLC44A4Q53GD3 AC006380.1-201ENST00000603598 186 ntBASIC2.52□□□□□ -2.01
SLC44A4Q53GD3 AC104465.1-201ENST00000611365 139 ntBASIC2.52□□□□□ -2.01
SLC44A4Q53GD3 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.52□□□□□ -2.01
SLC44A4Q53GD3 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SLC44A4Q53GD3 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.51□□□□□ -2.01
SLC44A4Q53GD3 Y_RNA.8-201ENST00000362353 102 ntBASIC2.51□□□□□ -2.01
SLC44A4Q53GD3 Y_RNA.170-201ENST00000363746 110 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 246.3 ms