Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 MIR515-1-201ENST00000384884 83 ntBASIC1.92□□□□□ -2.1
EFNB3Q15768 MIR1283-2-201ENST00000408621 87 ntBASIC1.92□□□□□ -2.1
EFNB3Q15768 RNU2-61P-201ENST00000411069 191 ntBASIC1.92□□□□□ -2.1
EFNB3Q15768 MRPS10P1-201ENST00000448483 130 ntBASIC1.92□□□□□ -2.1
EFNB3Q15768 RPS29P21-201ENST00000496272 170 ntBASIC1.92□□□□□ -2.1
EFNB3Q15768 YWHAEP4-201ENST00000505390 198 ntBASIC1.92□□□□□ -2.1
EFNB3Q15768 RNU6-1338P-201ENST00000516328 91 ntBASIC1.92□□□□□ -2.1
EFNB3Q15768 RNA5SP200-201ENST00000516360 103 ntBASIC1.92□□□□□ -2.1
EFNB3Q15768 SNORA31.25-201ENST00000517242 134 ntBASIC1.92□□□□□ -2.1
EFNB3Q15768 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.92□□□□□ -2.1
EFNB3Q15768 MIR4287-201ENST00000579398 78 ntBASIC1.92□□□□□ -2.1
EFNB3Q15768 AP001282.2-201ENST00000616149 309 ntBASIC1.92□□□□□ -2.1
EFNB3Q15768 MIR6132-201ENST00000622083 109 ntBASIC1.92□□□□□ -2.1
EFNB3Q15768 MIR338-201ENST00000636369 67 ntBASIC1.92□□□□□ -2.1
EFNB3Q15768 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
EFNB3Q15768 AC010615.1-201ENST00000594254 1764 ntBASIC1.92□□□□□ -2.1
EFNB3Q15768 AC005336.3-201ENST00000623833 2679 ntBASIC1.91□□□□□ -2.1
EFNB3Q15768 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
EFNB3Q15768 RNU1-51P-201ENST00000365345 176 ntBASIC1.91□□□□□ -2.1
EFNB3Q15768 RNU6-514P-201ENST00000384208 107 ntBASIC1.91□□□□□ -2.1
EFNB3Q15768 RNU6-505P-201ENST00000384427 107 ntBASIC1.91□□□□□ -2.1
EFNB3Q15768 MIR221-201ENST00000385135 110 ntBASIC1.91□□□□□ -2.1
EFNB3Q15768 RNU11-3P-201ENST00000391111 133 ntBASIC1.91□□□□□ -2.1
EFNB3Q15768 MIR1261-201ENST00000408659 82 ntBASIC1.91□□□□□ -2.1
EFNB3Q15768 SNORA11.4-201ENST00000408823 129 ntBASIC1.91□□□□□ -2.1
EFNB3Q15768 CST2P1-201ENST00000425770 87 ntBASIC1.91□□□□□ -2.1
EFNB3Q15768 RPS26P55-201ENST00000471178 356 ntBASIC1.91□□□□□ -2.1
EFNB3Q15768 RPS27P22-201ENST00000478056 241 ntBASIC1.91□□□□□ -2.1
EFNB3Q15768 RNA5SP20-201ENST00000515976 84 ntBASIC1.91□□□□□ -2.1
EFNB3Q15768 IGKV3-31-201ENST00000523109 329 ntBASIC1.91□□□□□ -2.1
EFNB3Q15768 DEFB117-201ENST00000602356 141 ntBASIC1.91□□□□□ -2.1
EFNB3Q15768 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.91□□□□□ -2.1
EFNB3Q15768 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
EFNB3Q15768 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
EFNB3Q15768 AL391987.6-201ENST00000305671 199 ntBASIC1.9□□□□□ -2.11
EFNB3Q15768 SNORA25.1-201ENST00000362326 128 ntBASIC1.9□□□□□ -2.11
EFNB3Q15768 Y_RNA.287-201ENST00000364853 94 ntBASIC1.9□□□□□ -2.11
EFNB3Q15768 RNU6-407P-201ENST00000365280 104 ntBASIC1.9□□□□□ -2.11
EFNB3Q15768 Y_RNA.418-201ENST00000384029 102 ntBASIC1.9□□□□□ -2.11
EFNB3Q15768 AL117342.1-201ENST00000404861 406 ntBASIC1.9□□□□□ -2.11
EFNB3Q15768 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.9□□□□□ -2.11
EFNB3Q15768 HSPE1P13-201ENST00000451143 297 ntBASIC1.9□□□□□ -2.11
EFNB3Q15768 RNA5SP233-201ENST00000459153 113 ntBASIC1.9□□□□□ -2.11
EFNB3Q15768 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.9□□□□□ -2.11
EFNB3Q15768 SERF1AP1-201ENST00000514575 187 ntBASIC1.9□□□□□ -2.11
EFNB3Q15768 AP005660.1-201ENST00000522972 293 ntBASIC1.9□□□□□ -2.11
EFNB3Q15768 AC027419.1-201ENST00000522976 328 ntBASIC1.9□□□□□ -2.11
EFNB3Q15768 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.9□□□□□ -2.11
EFNB3Q15768 DEFB108E-201ENST00000524692 240 ntBASIC1.9□□□□□ -2.11
EFNB3Q15768 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.9□□□□□ -2.11
EFNB3Q15768 AC023157.2-201ENST00000540596 141 ntBASIC1.9□□□□□ -2.11
EFNB3Q15768 MIR4438-201ENST00000585271 93 ntBASIC1.9□□□□□ -2.11
EFNB3Q15768 AC062037.2-201ENST00000610137 73 ntBASIC1.9□□□□□ -2.11
EFNB3Q15768 U6.73-201ENST00000619194 103 ntBASIC1.9□□□□□ -2.11
EFNB3Q15768 AC009831.4-201ENST00000620744 325 ntBASIC1.9□□□□□ -2.11
EFNB3Q15768 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.9□□□□□ -2.11
EFNB3Q15768 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
EFNB3Q15768 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
EFNB3Q15768 Y_RNA.16-201ENST00000362421 102 ntBASIC1.89□□□□□ -2.11
EFNB3Q15768 Y_RNA.124-201ENST00000363339 93 ntBASIC1.89□□□□□ -2.11
EFNB3Q15768 RNU1-96P-201ENST00000364163 162 ntBASIC1.89□□□□□ -2.11
EFNB3Q15768 Y_RNA.237-201ENST00000364439 102 ntBASIC1.89□□□□□ -2.11
EFNB3Q15768 RNU6-417P-201ENST00000384712 107 ntBASIC1.89□□□□□ -2.11
EFNB3Q15768 MIR597-201ENST00000384968 97 ntBASIC1.89□□□□□ -2.11
EFNB3Q15768 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
EFNB3Q15768 SNORA48.3-201ENST00000391081 134 ntBASIC1.89□□□□□ -2.11
EFNB3Q15768 HMGN2P3-201ENST00000433603 273 ntBASIC1.89□□□□□ -2.11
EFNB3Q15768 HMGN2P5-201ENST00000436882 273 ntBASIC1.89□□□□□ -2.11
EFNB3Q15768 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.89□□□□□ -2.11
EFNB3Q15768 SNORD127-201ENST00000458892 86 ntBASIC1.89□□□□□ -2.11
EFNB3Q15768 AC055731.1-201ENST00000474387 401 ntBASIC1.89□□□□□ -2.11
EFNB3Q15768 AC079804.2-201ENST00000490376 200 ntBASIC1.89□□□□□ -2.11
EFNB3Q15768 SCARNA24.2-201ENST00000516968 130 ntBASIC1.89□□□□□ -2.11
EFNB3Q15768 RNU2-19P-201ENST00000517288 84 ntBASIC1.89□□□□□ -2.11
EFNB3Q15768 AC024995.1-201ENST00000523014 93 ntBASIC1.89□□□□□ -2.11
EFNB3Q15768 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.89□□□□□ -2.11
EFNB3Q15768 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.89□□□□□ -2.11
EFNB3Q15768 AL359075.3-201ENST00000613288 217 ntBASIC1.89□□□□□ -2.11
EFNB3Q15768 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
EFNB3Q15768 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
EFNB3Q15768 MIRLET7G-201ENST00000362280 84 ntBASIC1.88□□□□□ -2.11
EFNB3Q15768 RNU6-862P-201ENST00000362804 105 ntBASIC1.88□□□□□ -2.11
EFNB3Q15768 RNU4-80P-201ENST00000363200 141 ntBASIC1.88□□□□□ -2.11
EFNB3Q15768 SNORA16B-201ENST00000364674 135 ntBASIC1.88□□□□□ -2.11
EFNB3Q15768 RNU11-5P-201ENST00000391216 129 ntBASIC1.88□□□□□ -2.11
EFNB3Q15768 Y_RNA.618-201ENST00000410949 107 ntBASIC1.88□□□□□ -2.11
EFNB3Q15768 MTCO1P5-201ENST00000433573 344 ntBASIC1.88□□□□□ -2.11
EFNB3Q15768 MTND2P29-201ENST00000438595 412 ntBASIC1.88□□□□□ -2.11
EFNB3Q15768 RNU6-1132P-201ENST00000459214 107 ntBASIC1.88□□□□□ -2.11
EFNB3Q15768 AC097462.1-201ENST00000514125 324 ntBASIC1.88□□□□□ -2.11
EFNB3Q15768 SCARNA16.3-201ENST00000516595 184 ntBASIC1.88□□□□□ -2.11
EFNB3Q15768 MIR3145-201ENST00000580727 82 ntBASIC1.88□□□□□ -2.11
EFNB3Q15768 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.88□□□□□ -2.11
EFNB3Q15768 AC022513.1-201ENST00000624512 117 ntBASIC1.88□□□□□ -2.11
EFNB3Q15768 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
EFNB3Q15768 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
EFNB3Q15768 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
EFNB3Q15768 RNU1-22P-201ENST00000363334 158 ntBASIC1.87□□□□□ -2.11
EFNB3Q15768 AL356379.1-201ENST00000414105 126 ntBASIC1.87□□□□□ -2.11
EFNB3Q15768 snoU13.15-201ENST00000459407 104 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 243.2 ms