Protein–RNA interactions for Protein: Q13133

NR1H3, Oxysterols receptor LXR-alpha, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3Q13133 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.72□□□□□ -1.81
NR1H3Q13133 AL357552.1-201ENST00000445254 415 ntBASIC3.72□□□□□ -1.81
NR1H3Q13133 RN7SL601P-201ENST00000471221 293 ntBASIC3.72□□□□□ -1.81
NR1H3Q13133 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.72□□□□□ -1.81
NR1H3Q13133 AC008011.1-201ENST00000545989 227 ntBASIC3.72□□□□□ -1.81
NR1H3Q13133 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.72□□□□□ -1.81
NR1H3Q13133 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.72□□□□□ -1.81
NR1H3Q13133 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.72□□□□□ -1.81
NR1H3Q13133 AC018630.2-201ENST00000534866 2403 ntBASIC3.72□□□□□ -1.81
NR1H3Q13133 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
NR1H3Q13133 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.81
NR1H3Q13133 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.71□□□□□ -1.82
NR1H3Q13133 Y_RNA.242-201ENST00000364473 110 ntBASIC3.71□□□□□ -1.82
NR1H3Q13133 Y_RNA.267-201ENST00000364679 109 ntBASIC3.71□□□□□ -1.82
NR1H3Q13133 AL031121.1-201ENST00000406553 254 ntBASIC3.71□□□□□ -1.82
NR1H3Q13133 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.71□□□□□ -1.82
NR1H3Q13133 AL159169.1-201ENST00000421119 127 ntBASIC3.71□□□□□ -1.82
NR1H3Q13133 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.71□□□□□ -1.82
NR1H3Q13133 AL021397.1-201ENST00000451806 248 ntBASIC3.71□□□□□ -1.82
NR1H3Q13133 Y_RNA.651-201ENST00000459380 103 ntBASIC3.71□□□□□ -1.82
NR1H3Q13133 AC010401.1-201ENST00000463867 348 ntBASIC3.71□□□□□ -1.82
NR1H3Q13133 RNU6-1041P-201ENST00000516254 102 ntBASIC3.71□□□□□ -1.82
NR1H3Q13133 Y_RNA.714-201ENST00000517065 90 ntBASIC3.71□□□□□ -1.82
NR1H3Q13133 RNU6-1270P-201ENST00000517128 108 ntBASIC3.71□□□□□ -1.82
NR1H3Q13133 NDUFB9P3-201ENST00000521269 501 ntBASIC3.71□□□□□ -1.82
NR1H3Q13133 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.71□□□□□ -1.82
NR1H3Q13133 AP003355.3-201ENST00000623465 114 ntBASIC3.71□□□□□ -1.82
NR1H3Q13133 MIR6079-201ENST00000635807 62 ntBASIC3.71□□□□□ -1.82
NR1H3Q13133 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.71□□□□□ -1.82
NR1H3Q13133 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.71□□□□□ -1.82
NR1H3Q13133 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NR1H3Q13133 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NR1H3Q13133 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NR1H3Q13133 RNU6-1292P-201ENST00000383856 107 ntBASIC3.7□□□□□ -1.82
NR1H3Q13133 MIR548A1-201ENST00000385041 97 ntBASIC3.7□□□□□ -1.82
NR1H3Q13133 MIRLET7F2-201ENST00000385277 83 ntBASIC3.7□□□□□ -1.82
NR1H3Q13133 RNA5SP467-201ENST00000391274 118 ntBASIC3.7□□□□□ -1.82
NR1H3Q13133 EDDM3CP-201ENST00000415977 425 ntBASIC3.7□□□□□ -1.82
NR1H3Q13133 RNU2-27P-201ENST00000516185 142 ntBASIC3.7□□□□□ -1.82
NR1H3Q13133 RNU6-579P-201ENST00000516879 102 ntBASIC3.7□□□□□ -1.82
NR1H3Q13133 RNU6-667P-201ENST00000517186 102 ntBASIC3.7□□□□□ -1.82
NR1H3Q13133 RNU7-128P-201ENST00000517247 62 ntBASIC3.7□□□□□ -1.82
NR1H3Q13133 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.7□□□□□ -1.82
NR1H3Q13133 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
NR1H3Q13133 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
NR1H3Q13133 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
NR1H3Q13133 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NR1H3Q13133 AC008555.8-201ENST00000623602 2168 ntBASIC3.69□□□□□ -1.82
NR1H3Q13133 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
NR1H3Q13133 RNU6-1164P-201ENST00000364428 107 ntBASIC3.69□□□□□ -1.82
NR1H3Q13133 SNORD24-201ENST00000383884 75 ntBASIC3.69□□□□□ -1.82
NR1H3Q13133 SNORD61-201ENST00000384252 73 ntBASIC3.69□□□□□ -1.82
NR1H3Q13133 SNORA74D-201ENST00000516404 141 ntBASIC3.69□□□□□ -1.82
NR1H3Q13133 RNU1-142P-201ENST00000516682 145 ntBASIC3.69□□□□□ -1.82
NR1H3Q13133 RNU6-341P-201ENST00000516973 96 ntBASIC3.69□□□□□ -1.82
NR1H3Q13133 AC008507.4-201ENST00000585464 127 ntBASIC3.69□□□□□ -1.82
NR1H3Q13133 AC022217.4-201ENST00000604389 163 ntBASIC3.69□□□□□ -1.82
NR1H3Q13133 MTND5P18-201ENST00000445624 1801 ntBASIC3.69□□□□□ -1.82
NR1H3Q13133 AC093010.3-201ENST00000570269 15214 ntBASIC3.69□□□□□ -1.82
NR1H3Q13133 AC068647.1-201ENST00000489539 2265 ntBASIC3.69□□□□□ -1.82
NR1H3Q13133 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NR1H3Q13133 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.69□□□□□ -1.82
NR1H3Q13133 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
NR1H3Q13133 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NR1H3Q13133 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
NR1H3Q13133 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.68□□□□□ -1.82
NR1H3Q13133 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
NR1H3Q13133 MIR126-201ENST00000362291 85 ntBASIC3.68□□□□□ -1.82
NR1H3Q13133 RNU6-888P-201ENST00000363010 101 ntBASIC3.68□□□□□ -1.82
NR1H3Q13133 MIR592-201ENST00000384959 97 ntBASIC3.68□□□□□ -1.82
NR1H3Q13133 SNORD72-201ENST00000390994 80 ntBASIC3.68□□□□□ -1.82
NR1H3Q13133 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.68□□□□□ -1.82
NR1H3Q13133 AL353689.1-201ENST00000438895 199 ntBASIC3.68□□□□□ -1.82
NR1H3Q13133 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.68□□□□□ -1.82
NR1H3Q13133 AL358944.1-201ENST00000528537 144 ntBASIC3.68□□□□□ -1.82
NR1H3Q13133 AC087685.1-201ENST00000587507 141 ntBASIC3.68□□□□□ -1.82
NR1H3Q13133 MIR8058-201ENST00000615737 89 ntBASIC3.68□□□□□ -1.82
NR1H3Q13133 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.68□□□□□ -1.82
NR1H3Q13133 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.68□□□□□ -1.82
NR1H3Q13133 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
NR1H3Q13133 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
NR1H3Q13133 MIR30E-201ENST00000362104 92 ntBASIC3.67□□□□□ -1.82
NR1H3Q13133 Y_RNA.309-201ENST00000365046 111 ntBASIC3.67□□□□□ -1.82
NR1H3Q13133 MIR490-201ENST00000384865 128 ntBASIC3.67□□□□□ -1.82
NR1H3Q13133 RNA5SP323-201ENST00000391094 133 ntBASIC3.67□□□□□ -1.82
NR1H3Q13133 MIR1263-201ENST00000408324 86 ntBASIC3.67□□□□□ -1.82
NR1H3Q13133 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.67□□□□□ -1.82
NR1H3Q13133 AC017083.1-201ENST00000428093 483 ntBASIC3.67□□□□□ -1.82
NR1H3Q13133 RNU6-693P-201ENST00000516134 107 ntBASIC3.67□□□□□ -1.82
NR1H3Q13133 Y_RNA.666-201ENST00000516187 112 ntBASIC3.67□□□□□ -1.82
NR1H3Q13133 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.67□□□□□ -1.82
NR1H3Q13133 AC022149.2-201ENST00000621061 203 ntBASIC3.67□□□□□ -1.82
NR1H3Q13133 MIR338-201ENST00000636369 67 ntBASIC3.67□□□□□ -1.82
NR1H3Q13133 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NR1H3Q13133 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NR1H3Q13133 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NR1H3Q13133 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
NR1H3Q13133 RNU6-1255P-201ENST00000363434 112 ntBASIC3.66□□□□□ -1.82
NR1H3Q13133 RNU1-33P-201ENST00000364249 162 ntBASIC3.66□□□□□ -1.82
NR1H3Q13133 SNORD21-201ENST00000383953 95 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms