Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 Y_RNA.24-201ENST00000362508 103 ntBASIC2.67□□□□□ -1.98
IRF9Q00978 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.67□□□□□ -1.98
IRF9Q00978 RPL39P40-201ENST00000445481 146 ntBASIC2.67□□□□□ -1.98
IRF9Q00978 RNU6-1041P-201ENST00000516254 102 ntBASIC2.67□□□□□ -1.98
IRF9Q00978 RNU6-1212P-201ENST00000517023 104 ntBASIC2.67□□□□□ -1.98
IRF9Q00978 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.67□□□□□ -1.98
IRF9Q00978 CYCSP26-201ENST00000534107 320 ntBASIC2.67□□□□□ -1.98
IRF9Q00978 AC079600.2-201ENST00000550076 130 ntBASIC2.67□□□□□ -1.98
IRF9Q00978 EIF4BP1-201ENST00000554881 351 ntBASIC2.67□□□□□ -1.98
IRF9Q00978 MIR4724-201ENST00000579485 89 ntBASIC2.67□□□□□ -1.98
IRF9Q00978 MIR5688-201ENST00000580619 83 ntBASIC2.67□□□□□ -1.98
IRF9Q00978 AC093732.2-201ENST00000607950 274 ntBASIC2.67□□□□□ -1.98
IRF9Q00978 AL353149.1-201ENST00000610667 244 ntBASIC2.67□□□□□ -1.98
IRF9Q00978 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.67□□□□□ -1.98
IRF9Q00978 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
IRF9Q00978 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.67□□□□□ -1.98
IRF9Q00978 snoU2_19.4-201ENST00000364329 80 ntBASIC2.66□□□□□ -1.98
IRF9Q00978 SNORA44-201ENST00000384584 132 ntBASIC2.66□□□□□ -1.98
IRF9Q00978 RNU6-376P-201ENST00000384731 106 ntBASIC2.66□□□□□ -1.98
IRF9Q00978 Y_RNA.572-201ENST00000384757 98 ntBASIC2.66□□□□□ -1.98
IRF9Q00978 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
IRF9Q00978 RNA5SP210-201ENST00000391034 120 ntBASIC2.66□□□□□ -1.98
IRF9Q00978 RPL23AP54-201ENST00000495129 419 ntBASIC2.66□□□□□ -1.98
IRF9Q00978 RN7SL636P-201ENST00000497504 294 ntBASIC2.66□□□□□ -1.98
IRF9Q00978 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.66□□□□□ -1.98
IRF9Q00978 AC007536.1-201ENST00000533382 349 ntBASIC2.66□□□□□ -1.98
IRF9Q00978 MRPS18CP4-201ENST00000535821 231 ntBASIC2.66□□□□□ -1.98
IRF9Q00978 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.66□□□□□ -1.98
IRF9Q00978 MIR4635-201ENST00000583759 79 ntBASIC2.66□□□□□ -1.98
IRF9Q00978 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.66□□□□□ -1.98
IRF9Q00978 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.66□□□□□ -1.98
IRF9Q00978 SCARNA15.3-201ENST00000626315 122 ntBASIC2.66□□□□□ -1.98
IRF9Q00978 SCARNA4.1-201ENST00000628597 123 ntBASIC2.66□□□□□ -1.98
IRF9Q00978 AL137790.1-201ENST00000634283 177 ntBASIC2.66□□□□□ -1.98
IRF9Q00978 MIR338-201ENST00000636369 67 ntBASIC2.66□□□□□ -1.98
IRF9Q00978 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
IRF9Q00978 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.98
IRF9Q00978 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
IRF9Q00978 Y_RNA.111-201ENST00000363248 100 ntBASIC2.65□□□□□ -1.99
IRF9Q00978 RNU6-103P-201ENST00000363686 107 ntBASIC2.65□□□□□ -1.99
IRF9Q00978 Y_RNA.182-201ENST00000363880 111 ntBASIC2.65□□□□□ -1.99
IRF9Q00978 RNU1-96P-201ENST00000364163 162 ntBASIC2.65□□□□□ -1.99
IRF9Q00978 RNU6-969P-201ENST00000383900 105 ntBASIC2.65□□□□□ -1.99
IRF9Q00978 AL138827.1-201ENST00000402666 306 ntBASIC2.65□□□□□ -1.99
IRF9Q00978 EBAG9P1-201ENST00000418955 543 ntBASIC2.65□□□□□ -1.99
IRF9Q00978 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.65□□□□□ -1.99
IRF9Q00978 ATP5J2P3-201ENST00000451550 258 ntBASIC2.65□□□□□ -1.99
IRF9Q00978 RPS29P21-201ENST00000496272 170 ntBASIC2.65□□□□□ -1.99
IRF9Q00978 AC007229.1-201ENST00000590455 412 ntBASIC2.65□□□□□ -1.99
IRF9Q00978 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
IRF9Q00978 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.64□□□□□ -1.99
IRF9Q00978 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.64□□□□□ -1.99
IRF9Q00978 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
IRF9Q00978 SNORA38-201ENST00000363946 132 ntBASIC2.64□□□□□ -1.99
IRF9Q00978 RNU1-91P-201ENST00000364746 163 ntBASIC2.64□□□□□ -1.99
IRF9Q00978 Y_RNA.412-201ENST00000384001 104 ntBASIC2.64□□□□□ -1.99
IRF9Q00978 RNU1-148P-201ENST00000384472 162 ntBASIC2.64□□□□□ -1.99
IRF9Q00978 RNU6-136P-201ENST00000384663 107 ntBASIC2.64□□□□□ -1.99
IRF9Q00978 RNU6-1186P-201ENST00000410429 97 ntBASIC2.64□□□□□ -1.99
IRF9Q00978 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.64□□□□□ -1.99
IRF9Q00978 AL135938.1-201ENST00000443141 297 ntBASIC2.64□□□□□ -1.99
IRF9Q00978 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.64□□□□□ -1.99
IRF9Q00978 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
IRF9Q00978 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.64□□□□□ -1.99
IRF9Q00978 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
IRF9Q00978 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
IRF9Q00978 Y_RNA.75-201ENST00000362927 97 ntBASIC2.63□□□□□ -1.99
IRF9Q00978 RNA5SP493-201ENST00000364115 91 ntBASIC2.63□□□□□ -1.99
IRF9Q00978 RNU6-1164P-201ENST00000364428 107 ntBASIC2.63□□□□□ -1.99
IRF9Q00978 SNORA72-201ENST00000384339 132 ntBASIC2.63□□□□□ -1.99
IRF9Q00978 MIR548M-201ENST00000408260 86 ntBASIC2.63□□□□□ -1.99
IRF9Q00978 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.63□□□□□ -1.99
IRF9Q00978 RPS4XP11-201ENST00000446897 772 ntBASIC2.63□□□□□ -1.99
IRF9Q00978 RNU6-437P-201ENST00000459408 95 ntBASIC2.63□□□□□ -1.99
IRF9Q00978 YWHAEP4-201ENST00000505390 198 ntBASIC2.63□□□□□ -1.99
IRF9Q00978 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.63□□□□□ -1.99
IRF9Q00978 Y_RNA.797-201ENST00000515977 94 ntBASIC2.63□□□□□ -1.99
IRF9Q00978 RPPH1-2P-201ENST00000516688 293 ntBASIC2.63□□□□□ -1.99
IRF9Q00978 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.63□□□□□ -1.99
IRF9Q00978 MIR3126-201ENST00000577443 74 ntBASIC2.63□□□□□ -1.99
IRF9Q00978 AC073413.2-201ENST00000604332 360 ntBASIC2.63□□□□□ -1.99
IRF9Q00978 AC022202.1-201ENST00000613515 211 ntBASIC2.63□□□□□ -1.99
IRF9Q00978 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
IRF9Q00978 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
IRF9Q00978 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
IRF9Q00978 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
IRF9Q00978 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.62□□□□□ -1.99
IRF9Q00978 RNU6-23P-201ENST00000363283 107 ntBASIC2.62□□□□□ -1.99
IRF9Q00978 U8.9-201ENST00000365667 134 ntBASIC2.62□□□□□ -1.99
IRF9Q00978 MIR616-201ENST00000385293 97 ntBASIC2.62□□□□□ -1.99
IRF9Q00978 RNA5SP467-201ENST00000391274 118 ntBASIC2.62□□□□□ -1.99
IRF9Q00978 RNU6-383P-201ENST00000410864 94 ntBASIC2.62□□□□□ -1.99
IRF9Q00978 RNA5SP492-201ENST00000411330 114 ntBASIC2.62□□□□□ -1.99
IRF9Q00978 RPS15AP28-201ENST00000435088 386 ntBASIC2.62□□□□□ -1.99
IRF9Q00978 SNORA59A-201ENST00000459326 152 ntBASIC2.62□□□□□ -1.99
IRF9Q00978 RNU7-99P-201ENST00000516271 62 ntBASIC2.62□□□□□ -1.99
IRF9Q00978 RNU6-255P-201ENST00000516957 105 ntBASIC2.62□□□□□ -1.99
IRF9Q00978 RNU7-128P-201ENST00000517247 62 ntBASIC2.62□□□□□ -1.99
IRF9Q00978 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.62□□□□□ -1.99
IRF9Q00978 MIR4744-201ENST00000581563 82 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms