Protein–RNA interactions for Protein: Q00653

NFKB2, Nuclear factor NF-kappa-B p100 subunit, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB2Q00653 RNU6-412P-201ENST00000516434 106 ntBASIC3.18□□□□□ -1.9
NFKB2Q00653 SNORA31.26-201ENST00000517250 137 ntBASIC3.18□□□□□ -1.9
NFKB2Q00653 AC018630.3-201ENST00000542637 96 ntBASIC3.18□□□□□ -1.9
NFKB2Q00653 MIR5004-201ENST00000579078 107 ntBASIC3.18□□□□□ -1.9
NFKB2Q00653 AC120024.3-201ENST00000603167 156 ntBASIC3.18□□□□□ -1.9
NFKB2Q00653 AL355297.2-201ENST00000604792 129 ntBASIC3.18□□□□□ -1.9
NFKB2Q00653 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
NFKB2Q00653 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
NFKB2Q00653 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
NFKB2Q00653 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NFKB2Q00653 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.17□□□□□ -1.9
NFKB2Q00653 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
NFKB2Q00653 MIR148B-201ENST00000362252 99 ntBASIC3.17□□□□□ -1.9
NFKB2Q00653 RNU6-944P-201ENST00000364023 107 ntBASIC3.17□□□□□ -1.9
NFKB2Q00653 SNORD56.5-201ENST00000364281 72 ntBASIC3.17□□□□□ -1.9
NFKB2Q00653 Y_RNA.229-201ENST00000364347 113 ntBASIC3.17□□□□□ -1.9
NFKB2Q00653 Y_RNA.346-201ENST00000365385 112 ntBASIC3.17□□□□□ -1.9
NFKB2Q00653 RPS3AP1-201ENST00000413190 320 ntBASIC3.17□□□□□ -1.9
NFKB2Q00653 AC004386.2-201ENST00000441858 148 ntBASIC3.17□□□□□ -1.9
NFKB2Q00653 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.17□□□□□ -1.9
NFKB2Q00653 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.17□□□□□ -1.9
NFKB2Q00653 SNORA48.11-201ENST00000517015 89 ntBASIC3.17□□□□□ -1.9
NFKB2Q00653 RNU2-12P-201ENST00000517216 168 ntBASIC3.17□□□□□ -1.9
NFKB2Q00653 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.17□□□□□ -1.9
NFKB2Q00653 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NFKB2Q00653 Y_RNA.120-201ENST00000363304 110 ntBASIC3.16□□□□□ -1.9
NFKB2Q00653 Y_RNA.328-201ENST00000365208 113 ntBASIC3.16□□□□□ -1.9
NFKB2Q00653 SNORA44-201ENST00000384584 132 ntBASIC3.16□□□□□ -1.9
NFKB2Q00653 MIRLET7F2-201ENST00000385277 83 ntBASIC3.16□□□□□ -1.9
NFKB2Q00653 SNORD78.1-201ENST00000390866 65 ntBASIC3.16□□□□□ -1.9
NFKB2Q00653 MLLT10P1-201ENST00000418346 262 ntBASIC3.16□□□□□ -1.9
NFKB2Q00653 AC245047.4-201ENST00000433189 144 ntBASIC3.16□□□□□ -1.9
NFKB2Q00653 HMGN2P32-201ENST00000444648 269 ntBASIC3.16□□□□□ -1.9
NFKB2Q00653 AC104389.3-201ENST00000445629 235 ntBASIC3.16□□□□□ -1.9
NFKB2Q00653 RPS26P45-201ENST00000471748 340 ntBASIC3.16□□□□□ -1.9
NFKB2Q00653 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.16□□□□□ -1.9
NFKB2Q00653 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.16□□□□□ -1.9
NFKB2Q00653 AC091178.2-201ENST00000584401 117 ntBASIC3.16□□□□□ -1.9
NFKB2Q00653 AC005562.2-201ENST00000618264 111 ntBASIC3.16□□□□□ -1.9
NFKB2Q00653 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.16□□□□□ -1.9
NFKB2Q00653 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.16□□□□□ -1.9
NFKB2Q00653 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.16□□□□□ -1.9
NFKB2Q00653 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.16□□□□□ -1.9
NFKB2Q00653 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
NFKB2Q00653 RNU6-647P-201ENST00000364243 107 ntBASIC3.15□□□□□ -1.91
NFKB2Q00653 Y_RNA.281-201ENST00000364774 94 ntBASIC3.15□□□□□ -1.91
NFKB2Q00653 RNA5SP125-201ENST00000364843 120 ntBASIC3.15□□□□□ -1.91
NFKB2Q00653 RNU6-756P-201ENST00000383997 107 ntBASIC3.15□□□□□ -1.91
NFKB2Q00653 RNU6-793P-201ENST00000384233 104 ntBASIC3.15□□□□□ -1.91
NFKB2Q00653 RNU6-592P-201ENST00000411333 103 ntBASIC3.15□□□□□ -1.91
NFKB2Q00653 AC027124.2-201ENST00000428249 105 ntBASIC3.15□□□□□ -1.91
NFKB2Q00653 AC009969.1-201ENST00000438726 172 ntBASIC3.15□□□□□ -1.91
NFKB2Q00653 SNORA40.13-201ENST00000516379 120 ntBASIC3.15□□□□□ -1.91
NFKB2Q00653 TCL6_2.1-201ENST00000615162 119 ntBASIC3.15□□□□□ -1.91
NFKB2Q00653 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.15□□□□□ -1.91
NFKB2Q00653 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
NFKB2Q00653 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NFKB2Q00653 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
NFKB2Q00653 RNU6-1205P-201ENST00000363625 106 ntBASIC3.14□□□□□ -1.91
NFKB2Q00653 Y_RNA.219-201ENST00000364232 113 ntBASIC3.14□□□□□ -1.91
NFKB2Q00653 RNU6-546P-201ENST00000383991 107 ntBASIC3.14□□□□□ -1.91
NFKB2Q00653 RNU6-820P-201ENST00000384273 107 ntBASIC3.14□□□□□ -1.91
NFKB2Q00653 MIR561-201ENST00000385216 97 ntBASIC3.14□□□□□ -1.91
NFKB2Q00653 MIR549A-201ENST00000385268 96 ntBASIC3.14□□□□□ -1.91
NFKB2Q00653 AL139095.1-201ENST00000404326 391 ntBASIC3.14□□□□□ -1.91
NFKB2Q00653 RNU6-710P-201ENST00000410424 105 ntBASIC3.14□□□□□ -1.91
NFKB2Q00653 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.14□□□□□ -1.91
NFKB2Q00653 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.14□□□□□ -1.91
NFKB2Q00653 AC091179.3-201ENST00000474761 144 ntBASIC3.14□□□□□ -1.91
NFKB2Q00653 AC092185.1-201ENST00000491371 97 ntBASIC3.14□□□□□ -1.91
NFKB2Q00653 RN7SKP19-201ENST00000516016 252 ntBASIC3.14□□□□□ -1.91
NFKB2Q00653 RNU6-781P-201ENST00000516377 101 ntBASIC3.14□□□□□ -1.91
NFKB2Q00653 AC109329.2-201ENST00000519658 482 ntBASIC3.14□□□□□ -1.91
NFKB2Q00653 MIR2682-201ENST00000580305 110 ntBASIC3.14□□□□□ -1.91
NFKB2Q00653 MIR3945-201ENST00000581853 98 ntBASIC3.14□□□□□ -1.91
NFKB2Q00653 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
NFKB2Q00653 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.13□□□□□ -1.91
NFKB2Q00653 RNU6-1107P-201ENST00000364817 104 ntBASIC3.13□□□□□ -1.91
NFKB2Q00653 RNY3P5-201ENST00000384127 102 ntBASIC3.13□□□□□ -1.91
NFKB2Q00653 SNORA51.10-201ENST00000384418 136 ntBASIC3.13□□□□□ -1.91
NFKB2Q00653 SNORA46-201ENST00000384762 135 ntBASIC3.13□□□□□ -1.91
NFKB2Q00653 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
NFKB2Q00653 RPL21P3-201ENST00000395517 478 ntBASIC3.13□□□□□ -1.91
NFKB2Q00653 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.13□□□□□ -1.91
NFKB2Q00653 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.13□□□□□ -1.91
NFKB2Q00653 RNU2-44P-201ENST00000516795 194 ntBASIC3.13□□□□□ -1.91
NFKB2Q00653 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.13□□□□□ -1.91
NFKB2Q00653 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.13□□□□□ -1.91
NFKB2Q00653 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
NFKB2Q00653 MIR4724-201ENST00000579485 89 ntBASIC3.13□□□□□ -1.91
NFKB2Q00653 MIR378D2-201ENST00000580636 98 ntBASIC3.13□□□□□ -1.91
NFKB2Q00653 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
NFKB2Q00653 AC025166.1-201ENST00000612411 163 ntBASIC3.13□□□□□ -1.91
NFKB2Q00653 uc_338.25-201ENST00000613756 156 ntBASIC3.13□□□□□ -1.91
NFKB2Q00653 AL442128.1-201ENST00000615151 90 ntBASIC3.13□□□□□ -1.91
NFKB2Q00653 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NFKB2Q00653 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
NFKB2Q00653 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
NFKB2Q00653 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.12□□□□□ -1.91
NFKB2Q00653 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms