Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 RNU6-1329P-201ENST00000365664 107 ntBASIC-0.27□□□□□ -2.45
H3F3AP84243 MIR643-201ENST00000385267 97 ntBASIC-0.27□□□□□ -2.45
H3F3AP84243 RNU6-325P-201ENST00000411132 105 ntBASIC-0.27□□□□□ -2.45
H3F3AP84243 AL590632.1-201ENST00000424289 371 ntBASIC-0.27□□□□□ -2.45
H3F3AP84243 AL009048.1-201ENST00000450437 298 ntBASIC-0.27□□□□□ -2.45
H3F3AP84243 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.27□□□□□ -2.45
H3F3AP84243 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-0.27□□□□□ -2.45
H3F3AP84243 AC098679.4-201ENST00000624241 654 ntBASIC-0.27□□□□□ -2.45
H3F3AP84243 SNORA32.1-201ENST00000364514 115 ntBASIC-0.28□□□□□ -2.45
H3F3AP84243 MIR7-2-201ENST00000384970 110 ntBASIC-0.28□□□□□ -2.45
H3F3AP84243 RNA5SP496-201ENST00000391240 109 ntBASIC-0.28□□□□□ -2.45
H3F3AP84243 PCNPP3-201ENST00000393579 471 ntBASIC-0.28□□□□□ -2.45
H3F3AP84243 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.28□□□□□ -2.45
H3F3AP84243 RPL23AP54-201ENST00000495129 419 ntBASIC-0.28□□□□□ -2.45
H3F3AP84243 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-0.28□□□□□ -2.45
H3F3AP84243 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.28□□□□□ -2.45
H3F3AP84243 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-0.28□□□□□ -2.45
H3F3AP84243 AL357075.2-201ENST00000614906 189 ntBASIC-0.28□□□□□ -2.45
H3F3AP84243 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.29□□□□□ -2.46
H3F3AP84243 RNU6-934P-201ENST00000365154 107 ntBASIC-0.29□□□□□ -2.46
H3F3AP84243 RNU6-282P-201ENST00000365357 103 ntBASIC-0.29□□□□□ -2.46
H3F3AP84243 AC117470.1-201ENST00000381974 330 ntBASIC-0.29□□□□□ -2.46
H3F3AP84243 RNU6-933P-201ENST00000384424 107 ntBASIC-0.29□□□□□ -2.46
H3F3AP84243 MIR145-201ENST00000384967 88 ntBASIC-0.29□□□□□ -2.46
H3F3AP84243 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-0.29□□□□□ -2.46
H3F3AP84243 AL390729.2-201ENST00000416137 156 ntBASIC-0.29□□□□□ -2.46
H3F3AP84243 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-0.29□□□□□ -2.46
H3F3AP84243 SNORD123-201ENST00000459473 70 ntBASIC-0.29□□□□□ -2.46
H3F3AP84243 HMGN1P10-201ENST00000474557 553 ntBASIC-0.29□□□□□ -2.46
H3F3AP84243 SNORA40.12-201ENST00000516329 111 ntBASIC-0.29□□□□□ -2.46
H3F3AP84243 MTND2P38-201ENST00000522536 667 ntBASIC-0.29□□□□□ -2.46
H3F3AP84243 MIR4771-2-201ENST00000577758 74 ntBASIC-0.29□□□□□ -2.46
H3F3AP84243 MIR3678-201ENST00000578455 94 ntBASIC-0.29□□□□□ -2.46
H3F3AP84243 MIR4771-1-201ENST00000582617 74 ntBASIC-0.29□□□□□ -2.46
H3F3AP84243 AC245014.2-201ENST00000603689 287 ntBASIC-0.29□□□□□ -2.46
H3F3AP84243 AC246785.4-201ENST00000605374 287 ntBASIC-0.29□□□□□ -2.46
H3F3AP84243 AC009161.2-201ENST00000624626 138 ntBASIC-0.29□□□□□ -2.46
H3F3AP84243 RNA5SP325-201ENST00000363756 130 ntBASIC-0.3□□□□□ -2.46
H3F3AP84243 Y_RNA.179-201ENST00000363844 90 ntBASIC-0.3□□□□□ -2.46
H3F3AP84243 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.3□□□□□ -2.46
H3F3AP84243 RNU6-517P-201ENST00000384362 110 ntBASIC-0.3□□□□□ -2.46
H3F3AP84243 RNU6-929P-201ENST00000384429 107 ntBASIC-0.3□□□□□ -2.46
H3F3AP84243 RNU6-541P-201ENST00000384709 110 ntBASIC-0.3□□□□□ -2.46
H3F3AP84243 MIR513B-201ENST00000385136 84 ntBASIC-0.3□□□□□ -2.46
H3F3AP84243 AL590002.1-201ENST00000406554 418 ntBASIC-0.3□□□□□ -2.46
H3F3AP84243 AL359672.1-201ENST00000442302 409 ntBASIC-0.3□□□□□ -2.46
H3F3AP84243 AC141557.1-201ENST00000540982 400 ntBASIC-0.3□□□□□ -2.46
H3F3AP84243 MIR4804-201ENST00000581683 73 ntBASIC-0.3□□□□□ -2.46
H3F3AP84243 HULC.1-201ENST00000612720 240 ntBASIC-0.3□□□□□ -2.46
H3F3AP84243 AC016597.2-201ENST00000613256 341 ntBASIC-0.3□□□□□ -2.46
H3F3AP84243 SNORA9.1-201ENST00000362412 131 ntBASIC-0.31□□□□□ -2.46
H3F3AP84243 SNORA27.1-201ENST00000362604 124 ntBASIC-0.31□□□□□ -2.46
H3F3AP84243 U8.5-201ENST00000364528 136 ntBASIC-0.31□□□□□ -2.46
H3F3AP84243 RNU6-396P-201ENST00000365369 105 ntBASIC-0.31□□□□□ -2.46
H3F3AP84243 RNU6-136P-201ENST00000384663 107 ntBASIC-0.31□□□□□ -2.46
H3F3AP84243 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-0.31□□□□□ -2.46
H3F3AP84243 Z82188.1-201ENST00000436709 154 ntBASIC-0.31□□□□□ -2.46
H3F3AP84243 MTND1P26-201ENST00000440488 538 ntBASIC-0.31□□□□□ -2.46
H3F3AP84243 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC-0.31□□□□□ -2.46
H3F3AP84243 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-0.31□□□□□ -2.46
H3F3AP84243 MTND4P7-201ENST00000523876 130 ntBASIC-0.31□□□□□ -2.46
H3F3AP84243 AP003461.1-201ENST00000528866 78 ntBASIC-0.31□□□□□ -2.46
H3F3AP84243 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.31□□□□□ -2.46
H3F3AP84243 AC008536.2-201ENST00000607284 349 ntBASIC-0.31□□□□□ -2.46
H3F3AP84243 AC006504.8-201ENST00000621046 635 ntBASIC-0.31□□□□□ -2.46
H3F3AP84243 MIR377-201ENST00000362145 69 ntBASIC-0.32□□□□□ -2.46
H3F3AP84243 RNU6-280P-201ENST00000364145 104 ntBASIC-0.32□□□□□ -2.46
H3F3AP84243 RNU4-9P-201ENST00000364951 139 ntBASIC-0.32□□□□□ -2.46
H3F3AP84243 RNU6-580P-201ENST00000365159 107 ntBASIC-0.32□□□□□ -2.46
H3F3AP84243 RNU6V-201ENST00000384105 107 ntBASIC-0.32□□□□□ -2.46
H3F3AP84243 RNU6-514P-201ENST00000384208 107 ntBASIC-0.32□□□□□ -2.46
H3F3AP84243 MIR610-201ENST00000385139 96 ntBASIC-0.32□□□□□ -2.46
H3F3AP84243 MIR153-2-201ENST00000385225 87 ntBASIC-0.32□□□□□ -2.46
H3F3AP84243 MIR644A-201ENST00000385262 94 ntBASIC-0.32□□□□□ -2.46
H3F3AP84243 SNORD100-201ENST00000408573 76 ntBASIC-0.32□□□□□ -2.46
H3F3AP84243 Y_RNA.621-201ENST00000411065 96 ntBASIC-0.32□□□□□ -2.46
H3F3AP84243 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-0.32□□□□□ -2.46
H3F3AP84243 AC133104.1-201ENST00000429100 218 ntBASIC-0.32□□□□□ -2.46
H3F3AP84243 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-0.32□□□□□ -2.46
H3F3AP84243 RNU7-180P-201ENST00000459240 63 ntBASIC-0.32□□□□□ -2.46
H3F3AP84243 UBE2V1P12-201ENST00000503954 474 ntBASIC-0.32□□□□□ -2.46
H3F3AP84243 CCDC34P1-201ENST00000507441 517 ntBASIC-0.32□□□□□ -2.46
H3F3AP84243 AL157687.1-201ENST00000554853 619 ntBASIC-0.32□□□□□ -2.46
H3F3AP84243 UBL5P4-201ENST00000562584 236 ntBASIC-0.32□□□□□ -2.46
H3F3AP84243 CLPTM1LP1-201ENST00000604519 484 ntBASIC-0.32□□□□□ -2.46
H3F3AP84243 AL357078.3-201ENST00000607528 618 ntBASIC-0.32□□□□□ -2.46
H3F3AP84243 AP001506.1-201ENST00000615444 211 ntBASIC-0.32□□□□□ -2.46
H3F3AP84243 AL158209.2-201ENST00000619266 216 ntBASIC-0.32□□□□□ -2.46
H3F3AP84243 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.33□□□□□ -2.46
H3F3AP84243 RNU5F-3P-201ENST00000363767 117 ntBASIC-0.33□□□□□ -2.46
H3F3AP84243 SNORD115-32-201ENST00000364079 82 ntBASIC-0.33□□□□□ -2.46
H3F3AP84243 RNU6-117P-201ENST00000365415 107 ntBASIC-0.33□□□□□ -2.46
H3F3AP84243 SNORA40.3-201ENST00000390964 122 ntBASIC-0.33□□□□□ -2.46
H3F3AP84243 AL606489.2-201ENST00000433886 234 ntBASIC-0.33□□□□□ -2.46
H3F3AP84243 AL137792.2-201ENST00000443484 235 ntBASIC-0.33□□□□□ -2.46
H3F3AP84243 RNU7-129P-201ENST00000516128 62 ntBASIC-0.33□□□□□ -2.46
H3F3AP84243 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.33□□□□□ -2.46
H3F3AP84243 CPDP1-201ENST00000579660 283 ntBASIC-0.33□□□□□ -2.46
H3F3AP84243 MIR4762-201ENST00000585261 75 ntBASIC-0.33□□□□□ -2.46
H3F3AP84243 AC127459.3-201ENST00000624328 466 ntBASIC-0.33□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms