Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 RN7SL274P-201ENST00000492268 272 ntBASIC1.63□□□□□ -2.15
CX3CL1P78423 RNU6-764P-201ENST00000516396 105 ntBASIC1.63□□□□□ -2.15
CX3CL1P78423 AC131281.1-201ENST00000522984 164 ntBASIC1.63□□□□□ -2.15
CX3CL1P78423 IGKV3-31-201ENST00000523109 329 ntBASIC1.63□□□□□ -2.15
CX3CL1P78423 MIR4300-201ENST00000581016 96 ntBASIC1.63□□□□□ -2.15
CX3CL1P78423 AL096840.1-201ENST00000603287 93 ntBASIC1.63□□□□□ -2.15
CX3CL1P78423 AL355297.3-201ENST00000604082 446 ntBASIC1.63□□□□□ -2.15
CX3CL1P78423 AC011373.1-201ENST00000607270 237 ntBASIC1.63□□□□□ -2.15
CX3CL1P78423 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.63□□□□□ -2.15
CX3CL1P78423 Y_RNA.183-201ENST00000363882 113 ntBASIC1.62□□□□□ -2.15
CX3CL1P78423 RNU6-117P-201ENST00000365415 107 ntBASIC1.62□□□□□ -2.15
CX3CL1P78423 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.62□□□□□ -2.15
CX3CL1P78423 RNU6-505P-201ENST00000384427 107 ntBASIC1.62□□□□□ -2.15
CX3CL1P78423 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.62□□□□□ -2.15
CX3CL1P78423 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.62□□□□□ -2.15
CX3CL1P78423 AC010655.3-201ENST00000478818 450 ntBASIC1.62□□□□□ -2.15
CX3CL1P78423 MRPS17P9-201ENST00000511924 393 ntBASIC1.62□□□□□ -2.15
CX3CL1P78423 SNORA70.12-201ENST00000516084 153 ntBASIC1.62□□□□□ -2.15
CX3CL1P78423 RNU6-436P-201ENST00000516171 114 ntBASIC1.62□□□□□ -2.15
CX3CL1P78423 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.62□□□□□ -2.15
CX3CL1P78423 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.62□□□□□ -2.15
CX3CL1P78423 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.62□□□□□ -2.15
CX3CL1P78423 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.62□□□□□ -2.15
CX3CL1P78423 AC022217.4-201ENST00000604389 163 ntBASIC1.62□□□□□ -2.15
CX3CL1P78423 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.62□□□□□ -2.15
CX3CL1P78423 MIR376A1-201ENST00000616574 68 ntBASIC1.62□□□□□ -2.15
CX3CL1P78423 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.62□□□□□ -2.15
CX3CL1P78423 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.61□□□□□ -2.15
CX3CL1P78423 SNORD81.1-201ENST00000363064 77 ntBASIC1.61□□□□□ -2.15
CX3CL1P78423 U8.2-201ENST00000363156 134 ntBASIC1.61□□□□□ -2.15
CX3CL1P78423 Y_RNA.105-201ENST00000363182 111 ntBASIC1.61□□□□□ -2.15
CX3CL1P78423 RNA5SP126-201ENST00000365092 109 ntBASIC1.61□□□□□ -2.15
CX3CL1P78423 SNORA4.2-201ENST00000365313 147 ntBASIC1.61□□□□□ -2.15
CX3CL1P78423 RNU6-21P-201ENST00000384710 107 ntBASIC1.61□□□□□ -2.15
CX3CL1P78423 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
CX3CL1P78423 RNU6-985P-201ENST00000410182 104 ntBASIC1.61□□□□□ -2.15
CX3CL1P78423 RPL23AP36-201ENST00000413895 458 ntBASIC1.61□□□□□ -2.15
CX3CL1P78423 AC113618.1-201ENST00000416747 285 ntBASIC1.61□□□□□ -2.15
CX3CL1P78423 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.61□□□□□ -2.15
CX3CL1P78423 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.61□□□□□ -2.15
CX3CL1P78423 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.61□□□□□ -2.15
CX3CL1P78423 HMGB3P17-201ENST00000504195 649 ntBASIC1.61□□□□□ -2.15
CX3CL1P78423 AL442663.2-201ENST00000554385 511 ntBASIC1.61□□□□□ -2.15
CX3CL1P78423 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.61□□□□□ -2.15
CX3CL1P78423 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.61□□□□□ -2.15
CX3CL1P78423 AC116312.1-201ENST00000606841 314 ntBASIC1.61□□□□□ -2.15
CX3CL1P78423 AC103810.8-201ENST00000607347 118 ntBASIC1.61□□□□□ -2.15
CX3CL1P78423 Y_RNA.812-201ENST00000610788 101 ntBASIC1.61□□□□□ -2.15
CX3CL1P78423 Y_RNA.783-201ENST00000613546 102 ntBASIC1.61□□□□□ -2.15
CX3CL1P78423 Y_RNA.784-201ENST00000613803 101 ntBASIC1.61□□□□□ -2.15
CX3CL1P78423 Y_RNA.787-201ENST00000616522 101 ntBASIC1.61□□□□□ -2.15
CX3CL1P78423 Y_RNA.780-201ENST00000617336 101 ntBASIC1.61□□□□□ -2.15
CX3CL1P78423 Y_RNA.801-201ENST00000619005 101 ntBASIC1.61□□□□□ -2.15
CX3CL1P78423 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
CX3CL1P78423 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CX3CL1P78423 AL356292.1-201ENST00000283110 373 ntBASIC1.6□□□□□ -2.15
CX3CL1P78423 RNU6-661P-201ENST00000362409 107 ntBASIC1.6□□□□□ -2.15
CX3CL1P78423 Y_RNA.210-201ENST00000364161 110 ntBASIC1.6□□□□□ -2.15
CX3CL1P78423 Y_RNA.276-201ENST00000364732 109 ntBASIC1.6□□□□□ -2.15
CX3CL1P78423 Y_RNA.286-201ENST00000364813 102 ntBASIC1.6□□□□□ -2.15
CX3CL1P78423 Y_RNA.329-201ENST00000365209 107 ntBASIC1.6□□□□□ -2.15
CX3CL1P78423 Y_RNA.422-201ENST00000384054 114 ntBASIC1.6□□□□□ -2.15
CX3CL1P78423 RNU6-376P-201ENST00000384731 106 ntBASIC1.6□□□□□ -2.15
CX3CL1P78423 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
CX3CL1P78423 RNU6-121P-201ENST00000410525 99 ntBASIC1.6□□□□□ -2.15
CX3CL1P78423 RNU2-61P-201ENST00000411069 191 ntBASIC1.6□□□□□ -2.15
CX3CL1P78423 AL139156.1-201ENST00000412785 841 ntBASIC1.6□□□□□ -2.15
CX3CL1P78423 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.6□□□□□ -2.15
CX3CL1P78423 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.6□□□□□ -2.15
CX3CL1P78423 ELOCP20-201ENST00000422460 345 ntBASIC1.6□□□□□ -2.15
CX3CL1P78423 AL445646.1-201ENST00000431784 216 ntBASIC1.6□□□□□ -2.15
CX3CL1P78423 RNU6-1278P-201ENST00000516130 107 ntBASIC1.6□□□□□ -2.15
CX3CL1P78423 RNU6-1337P-201ENST00000516525 95 ntBASIC1.6□□□□□ -2.15
CX3CL1P78423 RNU6-63P-201ENST00000516690 95 ntBASIC1.6□□□□□ -2.15
CX3CL1P78423 RNA5SP481-201ENST00000516814 122 ntBASIC1.6□□□□□ -2.15
CX3CL1P78423 SNORA40.15-201ENST00000516884 107 ntBASIC1.6□□□□□ -2.15
CX3CL1P78423 MIR4648-201ENST00000580107 72 ntBASIC1.6□□□□□ -2.15
CX3CL1P78423 AC006504.6-201ENST00000590142 199 ntBASIC1.6□□□□□ -2.15
CX3CL1P78423 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.6□□□□□ -2.15
CX3CL1P78423 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.6□□□□□ -2.15
CX3CL1P78423 AC127459.3-201ENST00000624328 466 ntBASIC1.6□□□□□ -2.15
CX3CL1P78423 AC018630.2-201ENST00000534866 2403 ntBASIC1.6□□□□□ -2.15
CX3CL1P78423 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.59□□□□□ -2.15
CX3CL1P78423 SNORD113-8-201ENST00000363497 74 ntBASIC1.59□□□□□ -2.15
CX3CL1P78423 RNU6-102P-201ENST00000384485 104 ntBASIC1.59□□□□□ -2.15
CX3CL1P78423 RPL21P1-201ENST00000399532 476 ntBASIC1.59□□□□□ -2.15
CX3CL1P78423 AC010154.1-201ENST00000425857 269 ntBASIC1.59□□□□□ -2.15
CX3CL1P78423 AC245047.3-201ENST00000429428 127 ntBASIC1.59□□□□□ -2.15
CX3CL1P78423 HSPE1P13-201ENST00000451143 297 ntBASIC1.59□□□□□ -2.15
CX3CL1P78423 MRPS35P2-201ENST00000508242 191 ntBASIC1.59□□□□□ -2.15
CX3CL1P78423 SNORD113-5-201ENST00000607261 78 ntBASIC1.59□□□□□ -2.15
CX3CL1P78423 MIR6079-201ENST00000635807 62 ntBASIC1.59□□□□□ -2.15
CX3CL1P78423 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
CX3CL1P78423 Y_RNA.214-201ENST00000364201 112 ntBASIC1.58□□□□□ -2.16
CX3CL1P78423 SNORA70B-201ENST00000384210 135 ntBASIC1.58□□□□□ -2.16
CX3CL1P78423 RNU6-1160P-201ENST00000384546 104 ntBASIC1.58□□□□□ -2.16
CX3CL1P78423 SNORD115-46-201ENST00000390982 71 ntBASIC1.58□□□□□ -2.16
CX3CL1P78423 AL590004.1-201ENST00000405321 300 ntBASIC1.58□□□□□ -2.16
CX3CL1P78423 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.58□□□□□ -2.16
CX3CL1P78423 Y_RNA.602-201ENST00000410535 92 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms