Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC010999.1-201ENST00000611856 324 ntBASIC0.86□□□□□ -2.27
CCNA1P78396 SNORD3E-202ENST00000627253 216 ntBASIC0.86□□□□□ -2.27
CCNA1P78396 ZNF299P-201ENST00000406845 1804 ntBASIC0.86□□□□□ -2.27
CCNA1P78396 Y_RNA.89-201ENST00000363031 102 ntBASIC0.85□□□□□ -2.27
CCNA1P78396 RNU5F-3P-201ENST00000363767 117 ntBASIC0.85□□□□□ -2.27
CCNA1P78396 RNU4-76P-201ENST00000364509 141 ntBASIC0.85□□□□□ -2.27
CCNA1P78396 Y_RNA.450-201ENST00000384198 113 ntBASIC0.85□□□□□ -2.27
CCNA1P78396 RNU6-831P-201ENST00000384548 107 ntBASIC0.85□□□□□ -2.27
CCNA1P78396 RNU6-1001P-201ENST00000411265 100 ntBASIC0.85□□□□□ -2.27
CCNA1P78396 AL589823.1-201ENST00000429577 183 ntBASIC0.85□□□□□ -2.27
CCNA1P78396 USP9YP16-201ENST00000430287 407 ntBASIC0.85□□□□□ -2.27
CCNA1P78396 USP9YP23-201ENST00000455085 407 ntBASIC0.85□□□□□ -2.27
CCNA1P78396 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.85□□□□□ -2.27
CCNA1P78396 SNORD65B-201ENST00000459126 73 ntBASIC0.85□□□□□ -2.27
CCNA1P78396 RNU7-94P-201ENST00000459576 63 ntBASIC0.85□□□□□ -2.27
CCNA1P78396 PSMC1P5-201ENST00000512850 177 ntBASIC0.85□□□□□ -2.27
CCNA1P78396 Y_RNA.706-201ENST00000516933 99 ntBASIC0.85□□□□□ -2.27
CCNA1P78396 RNU1-54P-201ENST00000517181 120 ntBASIC0.85□□□□□ -2.27
CCNA1P78396 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.85□□□□□ -2.27
CCNA1P78396 AC093023.1-201ENST00000547375 507 ntBASIC0.85□□□□□ -2.27
CCNA1P78396 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.85□□□□□ -2.27
CCNA1P78396 MIR6128-201ENST00000615528 109 ntBASIC0.85□□□□□ -2.27
CCNA1P78396 AC073349.3-201ENST00000617616 186 ntBASIC0.85□□□□□ -2.27
CCNA1P78396 AC007742.2-201ENST00000618226 398 ntBASIC0.85□□□□□ -2.27
CCNA1P78396 MIR3662-201ENST00000637030 95 ntBASIC0.85□□□□□ -2.27
CCNA1P78396 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.85□□□□□ -2.27
CCNA1P78396 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
CCNA1P78396 RNY4P14-201ENST00000363656 96 ntBASIC0.84□□□□□ -2.27
CCNA1P78396 RNU6-595P-201ENST00000363944 107 ntBASIC0.84□□□□□ -2.27
CCNA1P78396 RNU4-41P-201ENST00000364426 143 ntBASIC0.84□□□□□ -2.27
CCNA1P78396 RNU6-842P-201ENST00000384269 107 ntBASIC0.84□□□□□ -2.27
CCNA1P78396 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.84□□□□□ -2.27
CCNA1P78396 USMG5P1-201ENST00000425964 177 ntBASIC0.84□□□□□ -2.27
CCNA1P78396 AC245047.7-201ENST00000440265 293 ntBASIC0.84□□□□□ -2.27
CCNA1P78396 AC010469.2-201ENST00000496412 480 ntBASIC0.84□□□□□ -2.27
CCNA1P78396 RNU6-1114P-201ENST00000516022 107 ntBASIC0.84□□□□□ -2.27
CCNA1P78396 Y_RNA.683-201ENST00000516508 93 ntBASIC0.84□□□□□ -2.27
CCNA1P78396 RNA5SP168-201ENST00000516642 112 ntBASIC0.84□□□□□ -2.27
CCNA1P78396 AC090142.3-201ENST00000519012 385 ntBASIC0.84□□□□□ -2.27
CCNA1P78396 AC136628.3-201ENST00000521868 290 ntBASIC0.84□□□□□ -2.27
CCNA1P78396 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC0.84□□□□□ -2.27
CCNA1P78396 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.84□□□□□ -2.27
CCNA1P78396 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.83□□□□□ -2.28
CCNA1P78396 HSBP1P2-201ENST00000299671 229 ntBASIC0.83□□□□□ -2.28
CCNA1P78396 Y_RNA.106-201ENST00000363189 100 ntBASIC0.83□□□□□ -2.28
CCNA1P78396 Y_RNA.295-201ENST00000364918 102 ntBASIC0.83□□□□□ -2.28
CCNA1P78396 Y_RNA.473-201ENST00000384333 102 ntBASIC0.83□□□□□ -2.28
CCNA1P78396 MIR608-201ENST00000384820 100 ntBASIC0.83□□□□□ -2.28
CCNA1P78396 MIR660-201ENST00000385235 97 ntBASIC0.83□□□□□ -2.28
CCNA1P78396 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.83□□□□□ -2.28
CCNA1P78396 MTND1P17-201ENST00000448961 204 ntBASIC0.83□□□□□ -2.28
CCNA1P78396 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.83□□□□□ -2.28
CCNA1P78396 AC018710.1-201ENST00000506509 158 ntBASIC0.83□□□□□ -2.28
CCNA1P78396 AC097462.1-201ENST00000514125 324 ntBASIC0.83□□□□□ -2.28
CCNA1P78396 RNU6-322P-201ENST00000516010 103 ntBASIC0.83□□□□□ -2.28
CCNA1P78396 RNU6-566P-201ENST00000516790 107 ntBASIC0.83□□□□□ -2.28
CCNA1P78396 MIR4790-201ENST00000577799 79 ntBASIC0.83□□□□□ -2.28
CCNA1P78396 AC125232.2-201ENST00000592457 143 ntBASIC0.83□□□□□ -2.28
CCNA1P78396 AC013244.2-201ENST00000603396 103 ntBASIC0.83□□□□□ -2.28
CCNA1P78396 AL357312.1-201ENST00000603879 298 ntBASIC0.83□□□□□ -2.28
CCNA1P78396 AC100812.1-201ENST00000607622 580 ntBASIC0.83□□□□□ -2.28
CCNA1P78396 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
CCNA1P78396 MTND5P16-201ENST00000460269 1703 ntBASIC0.82□□□□□ -2.28
CCNA1P78396 Y_RNA.157-201ENST00000363638 102 ntBASIC0.82□□□□□ -2.28
CCNA1P78396 RNU6-596P-201ENST00000365395 98 ntBASIC0.82□□□□□ -2.28
CCNA1P78396 RNU6-1013P-201ENST00000384180 107 ntBASIC0.82□□□□□ -2.28
CCNA1P78396 SNORA80D-201ENST00000384488 135 ntBASIC0.82□□□□□ -2.28
CCNA1P78396 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
CCNA1P78396 AC005534.2-201ENST00000431047 433 ntBASIC0.82□□□□□ -2.28
CCNA1P78396 AC002429.1-201ENST00000437672 148 ntBASIC0.82□□□□□ -2.28
CCNA1P78396 RPL39P39-201ENST00000455840 151 ntBASIC0.82□□□□□ -2.28
CCNA1P78396 AC048334.1-201ENST00000477975 159 ntBASIC0.82□□□□□ -2.28
CCNA1P78396 SNORD79.1-201ENST00000516069 84 ntBASIC0.82□□□□□ -2.28
CCNA1P78396 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.82□□□□□ -2.28
CCNA1P78396 SNORA28-201ENST00000606769 126 ntBASIC0.82□□□□□ -2.28
CCNA1P78396 MIR6079-201ENST00000635807 62 ntBASIC0.82□□□□□ -2.28
CCNA1P78396 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
CCNA1P78396 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
CCNA1P78396 Y_RNA.3-201ENST00000362331 103 ntBASIC0.81□□□□□ -2.28
CCNA1P78396 Y_RNA.490-201ENST00000384413 102 ntBASIC0.81□□□□□ -2.28
CCNA1P78396 Y_RNA.516-201ENST00000384541 124 ntBASIC0.81□□□□□ -2.28
CCNA1P78396 MIR193B-201ENST00000384907 83 ntBASIC0.81□□□□□ -2.28
CCNA1P78396 MIR146A-201ENST00000385201 99 ntBASIC0.81□□□□□ -2.28
CCNA1P78396 MIR936-201ENST00000401264 98 ntBASIC0.81□□□□□ -2.28
CCNA1P78396 AL355796.1-201ENST00000406706 323 ntBASIC0.81□□□□□ -2.28
CCNA1P78396 CALM2P4-201ENST00000430810 426 ntBASIC0.81□□□□□ -2.28
CCNA1P78396 UQCRBP2-201ENST00000447827 297 ntBASIC0.81□□□□□ -2.28
CCNA1P78396 SNORD124-201ENST00000459577 104 ntBASIC0.81□□□□□ -2.28
CCNA1P78396 RNU4-49P-201ENST00000516080 140 ntBASIC0.81□□□□□ -2.28
CCNA1P78396 RNU6-197P-201ENST00000516680 100 ntBASIC0.81□□□□□ -2.28
CCNA1P78396 RNU7-172P-201ENST00000517125 64 ntBASIC0.81□□□□□ -2.28
CCNA1P78396 AL121579.1-201ENST00000555129 305 ntBASIC0.81□□□□□ -2.28
CCNA1P78396 EIF1P4-201ENST00000572664 335 ntBASIC0.81□□□□□ -2.28
CCNA1P78396 AC093913.1-201ENST00000614178 329 ntBASIC0.81□□□□□ -2.28
CCNA1P78396 AC068137.4-201ENST00000638485 296 ntBASIC0.81□□□□□ -2.28
CCNA1P78396 RNA5SP361-201ENST00000362686 118 ntBASIC0.8□□□□□ -2.28
CCNA1P78396 RNU6-407P-201ENST00000365280 104 ntBASIC0.8□□□□□ -2.28
CCNA1P78396 RNU6-281P-201ENST00000384212 103 ntBASIC0.8□□□□□ -2.28
CCNA1P78396 SNORA20B-201ENST00000384220 132 ntBASIC0.8□□□□□ -2.28
CCNA1P78396 SNORD115-47-201ENST00000391226 86 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 133.2 ms