Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-0.29□□□□□ -2.46
HIST1H3AP68431 SNORD123-201ENST00000459473 70 ntBASIC-0.29□□□□□ -2.46
HIST1H3AP68431 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.29□□□□□ -2.46
HIST1H3AP68431 SNORA40.12-201ENST00000516329 111 ntBASIC-0.29□□□□□ -2.46
HIST1H3AP68431 MTND2P38-201ENST00000522536 667 ntBASIC-0.29□□□□□ -2.46
HIST1H3AP68431 MIR4771-2-201ENST00000577758 74 ntBASIC-0.29□□□□□ -2.46
HIST1H3AP68431 MIR4771-1-201ENST00000582617 74 ntBASIC-0.29□□□□□ -2.46
HIST1H3AP68431 AC245014.2-201ENST00000603689 287 ntBASIC-0.29□□□□□ -2.46
HIST1H3AP68431 AC246785.4-201ENST00000605374 287 ntBASIC-0.29□□□□□ -2.46
HIST1H3AP68431 AC067863.3-201ENST00000624172 122 ntBASIC-0.29□□□□□ -2.46
HIST1H3AP68431 AC009161.2-201ENST00000624626 138 ntBASIC-0.29□□□□□ -2.46
HIST1H3AP68431 SNORD114-26-201ENST00000363543 72 ntBASIC-0.3□□□□□ -2.46
HIST1H3AP68431 Y_RNA.179-201ENST00000363844 90 ntBASIC-0.3□□□□□ -2.46
HIST1H3AP68431 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.3□□□□□ -2.46
HIST1H3AP68431 RNU6-517P-201ENST00000384362 110 ntBASIC-0.3□□□□□ -2.46
HIST1H3AP68431 RNU6-541P-201ENST00000384709 110 ntBASIC-0.3□□□□□ -2.46
HIST1H3AP68431 MIR513B-201ENST00000385136 84 ntBASIC-0.3□□□□□ -2.46
HIST1H3AP68431 AL590002.1-201ENST00000406554 418 ntBASIC-0.3□□□□□ -2.46
HIST1H3AP68431 AL359672.1-201ENST00000442302 409 ntBASIC-0.3□□□□□ -2.46
HIST1H3AP68431 MIR3678-201ENST00000578455 94 ntBASIC-0.3□□□□□ -2.46
HIST1H3AP68431 MIR4804-201ENST00000581683 73 ntBASIC-0.3□□□□□ -2.46
HIST1H3AP68431 HULC.1-201ENST00000612720 240 ntBASIC-0.3□□□□□ -2.46
HIST1H3AP68431 AC016597.2-201ENST00000613256 341 ntBASIC-0.3□□□□□ -2.46
HIST1H3AP68431 SNORA9.1-201ENST00000362412 131 ntBASIC-0.31□□□□□ -2.46
HIST1H3AP68431 SNORA27.1-201ENST00000362604 124 ntBASIC-0.31□□□□□ -2.46
HIST1H3AP68431 RNU6-396P-201ENST00000365369 105 ntBASIC-0.31□□□□□ -2.46
HIST1H3AP68431 RNU6-716P-201ENST00000365621 103 ntBASIC-0.31□□□□□ -2.46
HIST1H3AP68431 AC117470.1-201ENST00000381974 330 ntBASIC-0.31□□□□□ -2.46
HIST1H3AP68431 RNU6-136P-201ENST00000384663 107 ntBASIC-0.31□□□□□ -2.46
HIST1H3AP68431 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-0.31□□□□□ -2.46
HIST1H3AP68431 Z82188.1-201ENST00000436709 154 ntBASIC-0.31□□□□□ -2.46
HIST1H3AP68431 MTND1P26-201ENST00000440488 538 ntBASIC-0.31□□□□□ -2.46
HIST1H3AP68431 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC-0.31□□□□□ -2.46
HIST1H3AP68431 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-0.31□□□□□ -2.46
HIST1H3AP68431 MTND4P7-201ENST00000523876 130 ntBASIC-0.31□□□□□ -2.46
HIST1H3AP68431 AP003461.1-201ENST00000528866 78 ntBASIC-0.31□□□□□ -2.46
HIST1H3AP68431 AC141557.1-201ENST00000540982 400 ntBASIC-0.31□□□□□ -2.46
HIST1H3AP68431 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.31□□□□□ -2.46
HIST1H3AP68431 AC008536.2-201ENST00000607284 349 ntBASIC-0.31□□□□□ -2.46
HIST1H3AP68431 AC006504.8-201ENST00000621046 635 ntBASIC-0.31□□□□□ -2.46
HIST1H3AP68431 RNU6-280P-201ENST00000364145 104 ntBASIC-0.32□□□□□ -2.46
HIST1H3AP68431 RNU4-9P-201ENST00000364951 139 ntBASIC-0.32□□□□□ -2.46
HIST1H3AP68431 MIR593-201ENST00000384856 100 ntBASIC-0.32□□□□□ -2.46
HIST1H3AP68431 MIR610-201ENST00000385139 96 ntBASIC-0.32□□□□□ -2.46
HIST1H3AP68431 MIR153-2-201ENST00000385225 87 ntBASIC-0.32□□□□□ -2.46
HIST1H3AP68431 MIR644A-201ENST00000385262 94 ntBASIC-0.32□□□□□ -2.46
HIST1H3AP68431 Y_RNA.621-201ENST00000411065 96 ntBASIC-0.32□□□□□ -2.46
HIST1H3AP68431 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-0.32□□□□□ -2.46
HIST1H3AP68431 AC133104.1-201ENST00000429100 218 ntBASIC-0.32□□□□□ -2.46
HIST1H3AP68431 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-0.32□□□□□ -2.46
HIST1H3AP68431 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.32□□□□□ -2.46
HIST1H3AP68431 RNU7-180P-201ENST00000459240 63 ntBASIC-0.32□□□□□ -2.46
HIST1H3AP68431 UBE2V1P12-201ENST00000503954 474 ntBASIC-0.32□□□□□ -2.46
HIST1H3AP68431 CCDC34P1-201ENST00000507441 517 ntBASIC-0.32□□□□□ -2.46
HIST1H3AP68431 AL157687.1-201ENST00000554853 619 ntBASIC-0.32□□□□□ -2.46
HIST1H3AP68431 UBL5P4-201ENST00000562584 236 ntBASIC-0.32□□□□□ -2.46
HIST1H3AP68431 CLPTM1LP1-201ENST00000604519 484 ntBASIC-0.32□□□□□ -2.46
HIST1H3AP68431 AL357078.3-201ENST00000607528 618 ntBASIC-0.32□□□□□ -2.46
HIST1H3AP68431 AP001506.1-201ENST00000615444 211 ntBASIC-0.32□□□□□ -2.46
HIST1H3AP68431 AL158209.2-201ENST00000619266 216 ntBASIC-0.32□□□□□ -2.46
HIST1H3AP68431 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.33□□□□□ -2.46
HIST1H3AP68431 RNU5F-3P-201ENST00000363767 117 ntBASIC-0.33□□□□□ -2.46
HIST1H3AP68431 SNORD115-32-201ENST00000364079 82 ntBASIC-0.33□□□□□ -2.46
HIST1H3AP68431 RNU6-929P-201ENST00000384429 107 ntBASIC-0.33□□□□□ -2.46
HIST1H3AP68431 MIR145-201ENST00000384967 88 ntBASIC-0.33□□□□□ -2.46
HIST1H3AP68431 MIR643-201ENST00000385267 97 ntBASIC-0.33□□□□□ -2.46
HIST1H3AP68431 SNORA40.3-201ENST00000390964 122 ntBASIC-0.33□□□□□ -2.46
HIST1H3AP68431 AL137792.2-201ENST00000443484 235 ntBASIC-0.33□□□□□ -2.46
HIST1H3AP68431 CPDP1-201ENST00000579660 283 ntBASIC-0.33□□□□□ -2.46
HIST1H3AP68431 AL357075.2-201ENST00000614906 189 ntBASIC-0.33□□□□□ -2.46
HIST1H3AP68431 AC127459.3-201ENST00000624328 466 ntBASIC-0.33□□□□□ -2.46
HIST1H3AP68431 RNU6-181P-201ENST00000363225 107 ntBASIC-0.34□□□□□ -2.46
HIST1H3AP68431 U8.5-201ENST00000364528 136 ntBASIC-0.34□□□□□ -2.46
HIST1H3AP68431 RNU6-514P-201ENST00000384208 107 ntBASIC-0.34□□□□□ -2.46
HIST1H3AP68431 MTCYBP4-201ENST00000401524 249 ntBASIC-0.34□□□□□ -2.46
HIST1H3AP68431 BX295541.1-201ENST00000417774 250 ntBASIC-0.34□□□□□ -2.46
HIST1H3AP68431 RPL30P16-201ENST00000419341 429 ntBASIC-0.34□□□□□ -2.46
HIST1H3AP68431 MTCYBP8-201ENST00000422855 651 ntBASIC-0.34□□□□□ -2.46
HIST1H3AP68431 MTCO1P29-201ENST00000496868 288 ntBASIC-0.34□□□□□ -2.46
HIST1H3AP68431 AC093303.1-201ENST00000514549 295 ntBASIC-0.34□□□□□ -2.46
HIST1H3AP68431 RNU6-189P-201ENST00000516120 101 ntBASIC-0.34□□□□□ -2.46
HIST1H3AP68431 RNU6-445P-201ENST00000516949 107 ntBASIC-0.34□□□□□ -2.46
HIST1H3AP68431 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC-0.34□□□□□ -2.46
HIST1H3AP68431 MIR4676-201ENST00000583078 72 ntBASIC-0.34□□□□□ -2.46
HIST1H3AP68431 AC087683.1-201ENST00000591187 441 ntBASIC-0.34□□□□□ -2.46
HIST1H3AP68431 AL136370.1-201ENST00000608166 691 ntBASIC-0.34□□□□□ -2.46
HIST1H3AP68431 AF250324.2-201ENST00000608299 610 ntBASIC-0.34□□□□□ -2.46
HIST1H3AP68431 AL391834.2-201ENST00000609982 546 ntBASIC-0.34□□□□□ -2.46
HIST1H3AP68431 AL591926.4-201ENST00000616895 298 ntBASIC-0.34□□□□□ -2.46
HIST1H3AP68431 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.34□□□□□ -2.46
HIST1H3AP68431 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-0.34□□□□□ -2.46
HIST1H3AP68431 RNA5SP325-201ENST00000363756 130 ntBASIC-0.35□□□□□ -2.47
HIST1H3AP68431 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.35□□□□□ -2.47
HIST1H3AP68431 PCNPP3-201ENST00000393579 471 ntBASIC-0.35□□□□□ -2.47
HIST1H3AP68431 RNU2-59P-201ENST00000410482 191 ntBASIC-0.35□□□□□ -2.47
HIST1H3AP68431 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-0.35□□□□□ -2.47
HIST1H3AP68431 MTND4P32-201ENST00000437189 1237 ntBASIC-0.35□□□□□ -2.47
HIST1H3AP68431 AL033528.1-201ENST00000453780 140 ntBASIC-0.35□□□□□ -2.47
HIST1H3AP68431 AL356010.1-201ENST00000456364 102 ntBASIC-0.35□□□□□ -2.47
HIST1H3AP68431 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.35□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms