Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
USP46P62068 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
USP46P62068 ZNF720P1-201ENST00000562403 1939 ntBASIC3.88□□□□□ -1.79
USP46P62068 RNU6-349P-201ENST00000362402 107 ntBASIC3.88□□□□□ -1.79
USP46P62068 RNU6-1084P-201ENST00000362498 107 ntBASIC3.88□□□□□ -1.79
USP46P62068 RNA5SP119-201ENST00000362715 117 ntBASIC3.88□□□□□ -1.79
USP46P62068 RNA5SP139-201ENST00000364340 117 ntBASIC3.88□□□□□ -1.79
USP46P62068 RNA5SP173-201ENST00000364857 136 ntBASIC3.88□□□□□ -1.79
USP46P62068 Y_RNA.298-201ENST00000364960 107 ntBASIC3.88□□□□□ -1.79
USP46P62068 Y_RNA.344-201ENST00000365381 112 ntBASIC3.88□□□□□ -1.79
USP46P62068 ATP5A1P2-201ENST00000412323 255 ntBASIC3.88□□□□□ -1.79
USP46P62068 HMGN2P7-201ENST00000456186 273 ntBASIC3.88□□□□□ -1.79
USP46P62068 RNU7-164P-201ENST00000459221 62 ntBASIC3.88□□□□□ -1.79
USP46P62068 AC010401.1-201ENST00000463867 348 ntBASIC3.88□□□□□ -1.79
USP46P62068 RN7SKP209-201ENST00000516888 304 ntBASIC3.88□□□□□ -1.79
USP46P62068 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.88□□□□□ -1.79
USP46P62068 AP002004.2-201ENST00000531656 154 ntBASIC3.88□□□□□ -1.79
USP46P62068 AC091544.4-201ENST00000555268 342 ntBASIC3.88□□□□□ -1.79
USP46P62068 Y_RNA.818-201ENST00000618813 71 ntBASIC3.88□□□□□ -1.79
USP46P62068 MIR338-201ENST00000636369 67 ntBASIC3.88□□□□□ -1.79
USP46P62068 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
USP46P62068 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
USP46P62068 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
USP46P62068 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
USP46P62068 SNORD115-28-201ENST00000363931 81 ntBASIC3.87□□□□□ -1.79
USP46P62068 RNU1-133P-201ENST00000364867 167 ntBASIC3.87□□□□□ -1.79
USP46P62068 SNORD6-201ENST00000365444 73 ntBASIC3.87□□□□□ -1.79
USP46P62068 CD24P4-201ENST00000382840 243 ntBASIC3.87□□□□□ -1.79
USP46P62068 RNU6-442P-201ENST00000383968 104 ntBASIC3.87□□□□□ -1.79
USP46P62068 SNORA8-201ENST00000384574 139 ntBASIC3.87□□□□□ -1.79
USP46P62068 SNORD59.2-201ENST00000516873 68 ntBASIC3.87□□□□□ -1.79
USP46P62068 AC084364.2-201ENST00000546924 395 ntBASIC3.87□□□□□ -1.79
USP46P62068 AC008739.3-201ENST00000603262 127 ntBASIC3.87□□□□□ -1.79
USP46P62068 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.87□□□□□ -1.79
USP46P62068 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
USP46P62068 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.87□□□□□ -1.79
USP46P62068 AP001486.2-201ENST00000561652 5113 ntBASIC3.87□□□□□ -1.79
USP46P62068 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
USP46P62068 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
USP46P62068 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
USP46P62068 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
USP46P62068 SNORA33-201ENST00000363664 130 ntBASIC3.86□□□□□ -1.79
USP46P62068 SNORA63D-201ENST00000364359 132 ntBASIC3.86□□□□□ -1.79
USP46P62068 Y_RNA.265-201ENST00000364677 108 ntBASIC3.86□□□□□ -1.79
USP46P62068 RNY1P6-201ENST00000384193 109 ntBASIC3.86□□□□□ -1.79
USP46P62068 MTATP8P2-201ENST00000435212 202 ntBASIC3.86□□□□□ -1.79
USP46P62068 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.86□□□□□ -1.79
USP46P62068 AC023141.11-201ENST00000508864 202 ntBASIC3.86□□□□□ -1.79
USP46P62068 RN7SKP18-201ENST00000516005 275 ntBASIC3.86□□□□□ -1.79
USP46P62068 AP003327.1-201ENST00000529684 127 ntBASIC3.86□□□□□ -1.79
USP46P62068 MIR5047-201ENST00000579212 100 ntBASIC3.86□□□□□ -1.79
USP46P62068 U6.108-201ENST00000637764 58 ntBASIC3.86□□□□□ -1.79
USP46P62068 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
USP46P62068 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
USP46P62068 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
USP46P62068 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
USP46P62068 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
USP46P62068 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.85□□□□□ -1.79
USP46P62068 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
USP46P62068 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.85□□□□□ -1.79
USP46P62068 MIR208A-201ENST00000362287 71 ntBASIC3.85□□□□□ -1.79
USP46P62068 SNORD9-201ENST00000362566 104 ntBASIC3.85□□□□□ -1.79
USP46P62068 Y_RNA.37-201ENST00000362606 108 ntBASIC3.85□□□□□ -1.79
USP46P62068 RNU1-101P-201ENST00000391171 127 ntBASIC3.85□□□□□ -1.79
USP46P62068 RNU2-63P-201ENST00000410792 194 ntBASIC3.85□□□□□ -1.79
USP46P62068 RPS29P4-201ENST00000414733 161 ntBASIC3.85□□□□□ -1.79
USP46P62068 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.85□□□□□ -1.79
USP46P62068 SNORA70.18-201ENST00000516696 98 ntBASIC3.85□□□□□ -1.79
USP46P62068 SNORD36C-201ENST00000516733 66 ntBASIC3.85□□□□□ -1.79
USP46P62068 SNORA48.11-201ENST00000517015 89 ntBASIC3.85□□□□□ -1.79
USP46P62068 AL355297.2-201ENST00000604792 129 ntBASIC3.85□□□□□ -1.79
USP46P62068 SNORD115-40-201ENST00000606510 82 ntBASIC3.85□□□□□ -1.79
USP46P62068 MIR2052-201ENST00000636055 55 ntBASIC3.85□□□□□ -1.79
USP46P62068 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
USP46P62068 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
USP46P62068 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.85□□□□□ -1.79
USP46P62068 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
USP46P62068 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
USP46P62068 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
USP46P62068 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
USP46P62068 Y_RNA.547-201ENST00000384654 119 ntBASIC3.84□□□□□ -1.79
USP46P62068 MIR548D2-201ENST00000384955 97 ntBASIC3.84□□□□□ -1.79
USP46P62068 MIR95-201ENST00000385072 81 ntBASIC3.84□□□□□ -1.79
USP46P62068 RNU2-48P-201ENST00000410694 191 ntBASIC3.84□□□□□ -1.79
USP46P62068 AL445646.1-201ENST00000431784 216 ntBASIC3.84□□□□□ -1.79
USP46P62068 RN7SL330P-201ENST00000469709 307 ntBASIC3.84□□□□□ -1.79
USP46P62068 RNU6-667P-201ENST00000517186 102 ntBASIC3.84□□□□□ -1.79
USP46P62068 AC022523.2-201ENST00000561045 150 ntBASIC3.84□□□□□ -1.79
USP46P62068 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.84□□□□□ -1.79
USP46P62068 AC012531.5-201ENST00000611375 151 ntBASIC3.84□□□□□ -1.79
USP46P62068 AC006441.5-201ENST00000612680 209 ntBASIC3.84□□□□□ -1.79
USP46P62068 MIR1245B-201ENST00000636115 69 ntBASIC3.84□□□□□ -1.79
USP46P62068 AP000553.6-201ENST00000641242 118 ntBASIC3.84□□□□□ -1.79
USP46P62068 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.84□□□□□ -1.8
USP46P62068 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
USP46P62068 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
USP46P62068 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.83□□□□□ -1.8
USP46P62068 Y_RNA.78-201ENST00000362970 110 ntBASIC3.83□□□□□ -1.8
USP46P62068 RNA5SP387-201ENST00000364226 106 ntBASIC3.83□□□□□ -1.8
USP46P62068 RNU6-1104P-201ENST00000384723 104 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms