Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
WNT3AP56704 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
WNT3AP56704 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.59□□□□□ -1.99
WNT3AP56704 MIR367-201ENST00000362299 68 ntBASIC2.59□□□□□ -1.99
WNT3AP56704 U8.9-201ENST00000365667 134 ntBASIC2.59□□□□□ -1.99
WNT3AP56704 RNU6-136P-201ENST00000384663 107 ntBASIC2.59□□□□□ -1.99
WNT3AP56704 MIR626-201ENST00000385032 94 ntBASIC2.59□□□□□ -1.99
WNT3AP56704 RNU6-383P-201ENST00000410864 94 ntBASIC2.59□□□□□ -1.99
WNT3AP56704 HMGN2P34-201ENST00000437647 269 ntBASIC2.59□□□□□ -1.99
WNT3AP56704 AC009238.1-201ENST00000442165 424 ntBASIC2.59□□□□□ -1.99
WNT3AP56704 AC009237.6-201ENST00000446969 424 ntBASIC2.59□□□□□ -1.99
WNT3AP56704 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.59□□□□□ -1.99
WNT3AP56704 RNU6-453P-201ENST00000516819 85 ntBASIC2.59□□□□□ -1.99
WNT3AP56704 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.59□□□□□ -1.99
WNT3AP56704 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.59□□□□□ -1.99
WNT3AP56704 U2.22-201ENST00000636441 106 ntBASIC2.59□□□□□ -1.99
WNT3AP56704 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
WNT3AP56704 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.58□□□□□ -2
WNT3AP56704 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
WNT3AP56704 AC062016.1-201ENST00000355719 319 ntBASIC2.58□□□□□ -2
WNT3AP56704 RNU6-1130P-201ENST00000365434 107 ntBASIC2.58□□□□□ -2
WNT3AP56704 SNORA19-201ENST00000384737 128 ntBASIC2.58□□□□□ -2
WNT3AP56704 RNU6-394P-201ENST00000410735 107 ntBASIC2.58□□□□□ -2
WNT3AP56704 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.58□□□□□ -2
WNT3AP56704 RPL39P40-201ENST00000445481 146 ntBASIC2.58□□□□□ -2
WNT3AP56704 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.58□□□□□ -2
WNT3AP56704 HSPE1P13-201ENST00000451143 297 ntBASIC2.58□□□□□ -2
WNT3AP56704 AC108938.1-201ENST00000451204 136 ntBASIC2.58□□□□□ -2
WNT3AP56704 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.58□□□□□ -2
WNT3AP56704 RN7SKP164-201ENST00000516138 266 ntBASIC2.58□□□□□ -2
WNT3AP56704 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.58□□□□□ -2
WNT3AP56704 MIR5092-201ENST00000583139 88 ntBASIC2.58□□□□□ -2
WNT3AP56704 MIR4438-201ENST00000585271 93 ntBASIC2.58□□□□□ -2
WNT3AP56704 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.58□□□□□ -2
WNT3AP56704 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
WNT3AP56704 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.58□□□□□ -2
WNT3AP56704 AC009487.4-201ENST00000624969 3585 ntBASIC2.57□□□□□ -2
WNT3AP56704 AL157777.2-201ENST00000258070 137 ntBASIC2.57□□□□□ -2
WNT3AP56704 MIR340-201ENST00000362125 95 ntBASIC2.57□□□□□ -2
WNT3AP56704 SNORD114-7-201ENST00000362520 77 ntBASIC2.57□□□□□ -2
WNT3AP56704 Y_RNA.121-201ENST00000363309 113 ntBASIC2.57□□□□□ -2
WNT3AP56704 SNORA38-201ENST00000363946 132 ntBASIC2.57□□□□□ -2
WNT3AP56704 RNU4-13P-201ENST00000364019 141 ntBASIC2.57□□□□□ -2
WNT3AP56704 Y_RNA.272-201ENST00000364696 102 ntBASIC2.57□□□□□ -2
WNT3AP56704 SNORA26.7-201ENST00000391288 122 ntBASIC2.57□□□□□ -2
WNT3AP56704 NDUFB4P4-201ENST00000404822 243 ntBASIC2.57□□□□□ -2
WNT3AP56704 SNORA36B-201ENST00000410438 131 ntBASIC2.57□□□□□ -2
WNT3AP56704 AP001486.1-201ENST00000463339 476 ntBASIC2.57□□□□□ -2
WNT3AP56704 SCARNA8-201ENST00000515924 131 ntBASIC2.57□□□□□ -2
WNT3AP56704 RNU7-200P-201ENST00000516105 62 ntBASIC2.57□□□□□ -2
WNT3AP56704 RNU7-115P-201ENST00000516433 55 ntBASIC2.57□□□□□ -2
WNT3AP56704 RPPH1-2P-201ENST00000516688 293 ntBASIC2.57□□□□□ -2
WNT3AP56704 RNU6-856P-201ENST00000516959 98 ntBASIC2.57□□□□□ -2
WNT3AP56704 POLR3GP1-201ENST00000594073 261 ntBASIC2.57□□□□□ -2
WNT3AP56704 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.57□□□□□ -2
WNT3AP56704 U4atac.1-201ENST00000618345 95 ntBASIC2.57□□□□□ -2
WNT3AP56704 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
WNT3AP56704 AL159152.1-201ENST00000635019 2587 ntBASIC2.56□□□□□ -2
WNT3AP56704 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
WNT3AP56704 Y_RNA.75-201ENST00000362927 97 ntBASIC2.56□□□□□ -2
WNT3AP56704 RNU6-525P-201ENST00000363685 104 ntBASIC2.56□□□□□ -2
WNT3AP56704 SNORA5B-201ENST00000363786 132 ntBASIC2.56□□□□□ -2
WNT3AP56704 MT-TT-201ENST00000387460 66 ntBASIC2.56□□□□□ -2
WNT3AP56704 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.56□□□□□ -2
WNT3AP56704 RNA5SP511-201ENST00000410487 115 ntBASIC2.56□□□□□ -2
WNT3AP56704 RNA5SP184-201ENST00000411071 108 ntBASIC2.56□□□□□ -2
WNT3AP56704 AC060773.1-201ENST00000421698 310 ntBASIC2.56□□□□□ -2
WNT3AP56704 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.56□□□□□ -2
WNT3AP56704 RPL23AP54-201ENST00000495129 419 ntBASIC2.56□□□□□ -2
WNT3AP56704 RNU6-406P-201ENST00000516470 107 ntBASIC2.56□□□□□ -2
WNT3AP56704 RNU6-789P-201ENST00000517105 102 ntBASIC2.56□□□□□ -2
WNT3AP56704 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.56□□□□□ -2
WNT3AP56704 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.56□□□□□ -2
WNT3AP56704 MIR4724-201ENST00000579485 89 ntBASIC2.56□□□□□ -2
WNT3AP56704 MIR3910-1-201ENST00000580936 111 ntBASIC2.56□□□□□ -2
WNT3AP56704 MIR4744-201ENST00000581563 82 ntBASIC2.56□□□□□ -2
WNT3AP56704 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
WNT3AP56704 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.56□□□□□ -2
WNT3AP56704 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
WNT3AP56704 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
WNT3AP56704 SNORD115-3-201ENST00000363100 82 ntBASIC2.55□□□□□ -2
WNT3AP56704 RNU6-275P-201ENST00000364910 107 ntBASIC2.55□□□□□ -2
WNT3AP56704 Y_RNA.357-201ENST00000365487 109 ntBASIC2.55□□□□□ -2
WNT3AP56704 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
WNT3AP56704 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.55□□□□□ -2
WNT3AP56704 Y_RNA.441-201ENST00000384123 112 ntBASIC2.55□□□□□ -2
WNT3AP56704 MIR196B-201ENST00000384852 84 ntBASIC2.55□□□□□ -2
WNT3AP56704 AL135786.1-201ENST00000415892 214 ntBASIC2.55□□□□□ -2
WNT3AP56704 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
WNT3AP56704 AL392103.1-201ENST00000447000 198 ntBASIC2.55□□□□□ -2
WNT3AP56704 AL109933.2-201ENST00000452651 260 ntBASIC2.55□□□□□ -2
WNT3AP56704 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.55□□□□□ -2
WNT3AP56704 AC005972.2-201ENST00000604690 348 ntBASIC2.55□□□□□ -2
WNT3AP56704 AC108706.1-201ENST00000611053 297 ntBASIC2.55□□□□□ -2
WNT3AP56704 AC006435.5-201ENST00000624486 112 ntBASIC2.55□□□□□ -2
WNT3AP56704 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.55□□□□□ -2
WNT3AP56704 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.55□□□□□ -2
WNT3AP56704 CENPCP1-201ENST00000533085 2578 ntBASIC2.55□□□□□ -2
WNT3AP56704 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.54□□□□□ -2
WNT3AP56704 Y_RNA.23-201ENST00000362496 106 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms