Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 CYCSP26-201ENST00000534107 320 ntBASIC2.75□□□□□ -1.97
GFRA1P56159 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.75□□□□□ -1.97
GFRA1P56159 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.75□□□□□ -1.97
GFRA1P56159 MIR3126-201ENST00000577443 74 ntBASIC2.75□□□□□ -1.97
GFRA1P56159 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
GFRA1P56159 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
GFRA1P56159 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.75□□□□□ -1.97
GFRA1P56159 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.75□□□□□ -1.97
GFRA1P56159 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
GFRA1P56159 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
GFRA1P56159 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
GFRA1P56159 AC100821.1-201ENST00000523153 2479 ntBASIC2.74□□□□□ -1.97
GFRA1P56159 AC073325.2-201ENST00000339545 159 ntBASIC2.74□□□□□ -1.97
GFRA1P56159 RNA5SP383-201ENST00000362934 120 ntBASIC2.74□□□□□ -1.97
GFRA1P56159 RNU6-23P-201ENST00000363283 107 ntBASIC2.74□□□□□ -1.97
GFRA1P56159 SNORD56.3-201ENST00000363507 71 ntBASIC2.74□□□□□ -1.97
GFRA1P56159 RNA5SP493-201ENST00000364115 91 ntBASIC2.74□□□□□ -1.97
GFRA1P56159 Y_RNA.400-201ENST00000383963 111 ntBASIC2.74□□□□□ -1.97
GFRA1P56159 RNU6-643P-201ENST00000384018 107 ntBASIC2.74□□□□□ -1.97
GFRA1P56159 MIR29C-201ENST00000385231 88 ntBASIC2.74□□□□□ -1.97
GFRA1P56159 Y_RNA.621-201ENST00000411065 96 ntBASIC2.74□□□□□ -1.97
GFRA1P56159 AC006461.1-201ENST00000412637 326 ntBASIC2.74□□□□□ -1.97
GFRA1P56159 AC063976.3-201ENST00000426849 329 ntBASIC2.74□□□□□ -1.97
GFRA1P56159 AL109933.2-201ENST00000452651 260 ntBASIC2.74□□□□□ -1.97
GFRA1P56159 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.74□□□□□ -1.97
GFRA1P56159 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.74□□□□□ -1.97
GFRA1P56159 RNA5SP380-201ENST00000517190 98 ntBASIC2.74□□□□□ -1.97
GFRA1P56159 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.74□□□□□ -1.97
GFRA1P56159 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.74□□□□□ -1.97
GFRA1P56159 U2.22-201ENST00000636441 106 ntBASIC2.74□□□□□ -1.97
GFRA1P56159 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
GFRA1P56159 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.73□□□□□ -1.97
GFRA1P56159 MIR148B-201ENST00000362252 99 ntBASIC2.73□□□□□ -1.97
GFRA1P56159 SNORD115-3-201ENST00000363100 82 ntBASIC2.73□□□□□ -1.97
GFRA1P56159 Y_RNA.337-201ENST00000365312 102 ntBASIC2.73□□□□□ -1.97
GFRA1P56159 Y_RNA.343-201ENST00000365354 112 ntBASIC2.73□□□□□ -1.97
GFRA1P56159 SNORA44-201ENST00000384584 132 ntBASIC2.73□□□□□ -1.97
GFRA1P56159 Y_RNA.587-201ENST00000391210 103 ntBASIC2.73□□□□□ -1.97
GFRA1P56159 NDUFB4P4-201ENST00000404822 243 ntBASIC2.73□□□□□ -1.97
GFRA1P56159 SNORA79-201ENST00000408376 140 ntBASIC2.73□□□□□ -1.97
GFRA1P56159 BMS1P22-201ENST00000414726 313 ntBASIC2.73□□□□□ -1.97
GFRA1P56159 CST2P1-201ENST00000425770 87 ntBASIC2.73□□□□□ -1.97
GFRA1P56159 RNU7-128P-201ENST00000517247 62 ntBASIC2.73□□□□□ -1.97
GFRA1P56159 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.73□□□□□ -1.97
GFRA1P56159 AP001485.1-201ENST00000604799 199 ntBASIC2.73□□□□□ -1.97
GFRA1P56159 Y_RNA.778-201ENST00000620203 90 ntBASIC2.73□□□□□ -1.97
GFRA1P56159 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.73□□□□□ -1.97
GFRA1P56159 AL035425.3-201ENST00000564206 4996 ntBASIC2.73□□□□□ -1.97
GFRA1P56159 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
GFRA1P56159 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
GFRA1P56159 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
GFRA1P56159 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
GFRA1P56159 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
GFRA1P56159 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
GFRA1P56159 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
GFRA1P56159 RNU6-151P-201ENST00000364158 107 ntBASIC2.72□□□□□ -1.97
GFRA1P56159 RNU6-704P-201ENST00000364162 103 ntBASIC2.72□□□□□ -1.97
GFRA1P56159 SNORD50.2-201ENST00000365465 70 ntBASIC2.72□□□□□ -1.97
GFRA1P56159 DYNLT3P1-201ENST00000378574 347 ntBASIC2.72□□□□□ -1.97
GFRA1P56159 MIR562-201ENST00000384894 95 ntBASIC2.72□□□□□ -1.97
GFRA1P56159 MIR1278-201ENST00000408753 81 ntBASIC2.72□□□□□ -1.97
GFRA1P56159 Y_RNA.622-201ENST00000411091 108 ntBASIC2.72□□□□□ -1.97
GFRA1P56159 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.72□□□□□ -1.97
GFRA1P56159 RN7SL20P-201ENST00000488827 297 ntBASIC2.72□□□□□ -1.97
GFRA1P56159 RNU7-121P-201ENST00000516604 62 ntBASIC2.72□□□□□ -1.97
GFRA1P56159 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.72□□□□□ -1.97
GFRA1P56159 AC024995.1-201ENST00000523014 93 ntBASIC2.72□□□□□ -1.97
GFRA1P56159 RPL23AP91-201ENST00000569211 455 ntBASIC2.72□□□□□ -1.97
GFRA1P56159 AL021707.8-201ENST00000609428 183 ntBASIC2.72□□□□□ -1.97
GFRA1P56159 JPX_2.1-201ENST00000614161 69 ntBASIC2.72□□□□□ -1.97
GFRA1P56159 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.72□□□□□ -1.97
GFRA1P56159 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.72□□□□□ -1.97
GFRA1P56159 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
GFRA1P56159 AC018630.2-201ENST00000534866 2403 ntBASIC2.71□□□□□ -1.98
GFRA1P56159 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
GFRA1P56159 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
GFRA1P56159 Y_RNA.488-201ENST00000384403 102 ntBASIC2.71□□□□□ -1.98
GFRA1P56159 SNORA8-201ENST00000384574 139 ntBASIC2.71□□□□□ -1.98
GFRA1P56159 AL117342.1-201ENST00000404861 406 ntBASIC2.71□□□□□ -1.98
GFRA1P56159 RNU4-43P-201ENST00000410628 137 ntBASIC2.71□□□□□ -1.98
GFRA1P56159 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.71□□□□□ -1.98
GFRA1P56159 AC233266.1-201ENST00000454518 96 ntBASIC2.71□□□□□ -1.98
GFRA1P56159 RNU7-94P-201ENST00000459576 63 ntBASIC2.71□□□□□ -1.98
GFRA1P56159 RNU6-561P-201ENST00000516222 102 ntBASIC2.71□□□□□ -1.98
GFRA1P56159 MIR3169-201ENST00000578032 83 ntBASIC2.71□□□□□ -1.98
GFRA1P56159 DNAJC19P2-201ENST00000593340 302 ntBASIC2.71□□□□□ -1.98
GFRA1P56159 AL049861.1-201ENST00000603130 150 ntBASIC2.71□□□□□ -1.98
GFRA1P56159 AC242852.1-201ENST00000612151 96 ntBASIC2.71□□□□□ -1.98
GFRA1P56159 AC244015.1-201ENST00000622301 99 ntBASIC2.71□□□□□ -1.98
GFRA1P56159 MIR6079-201ENST00000635807 62 ntBASIC2.71□□□□□ -1.98
GFRA1P56159 AC132825.6-201ENST00000638861 357 ntBASIC2.71□□□□□ -1.98
GFRA1P56159 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
GFRA1P56159 AL157777.2-201ENST00000258070 137 ntBASIC2.7□□□□□ -1.98
GFRA1P56159 RNU6-862P-201ENST00000362804 105 ntBASIC2.7□□□□□ -1.98
GFRA1P56159 SNORD45.3-201ENST00000363836 72 ntBASIC2.7□□□□□ -1.98
GFRA1P56159 RNU6-1164P-201ENST00000364428 107 ntBASIC2.7□□□□□ -1.98
GFRA1P56159 RNU6-1080P-201ENST00000383982 107 ntBASIC2.7□□□□□ -1.98
GFRA1P56159 RNU1-148P-201ENST00000384472 162 ntBASIC2.7□□□□□ -1.98
GFRA1P56159 SNORA19-201ENST00000384737 128 ntBASIC2.7□□□□□ -1.98
GFRA1P56159 SNORA11.4-201ENST00000408823 129 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms