Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.74□□□□□ -2.13
CDH11P55287 HMGB3P17-201ENST00000504195 649 ntBASIC1.74□□□□□ -2.13
CDH11P55287 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.74□□□□□ -2.13
CDH11P55287 RNU6-237P-201ENST00000515985 71 ntBASIC1.74□□□□□ -2.13
CDH11P55287 RNU6-548P-201ENST00000517083 115 ntBASIC1.74□□□□□ -2.13
CDH11P55287 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.74□□□□□ -2.13
CDH11P55287 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.74□□□□□ -2.13
CDH11P55287 U6.73-201ENST00000619194 103 ntBASIC1.74□□□□□ -2.13
CDH11P55287 SNORA27.1-201ENST00000362604 124 ntBASIC1.73□□□□□ -2.13
CDH11P55287 MIR676-201ENST00000390702 67 ntBASIC1.73□□□□□ -2.13
CDH11P55287 RNA5SP467-201ENST00000391274 118 ntBASIC1.73□□□□□ -2.13
CDH11P55287 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.73□□□□□ -2.13
CDH11P55287 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.73□□□□□ -2.13
CDH11P55287 LINC01399-202ENST00000458450 244 ntBASIC1.73□□□□□ -2.13
CDH11P55287 MRPS35P2-201ENST00000508242 191 ntBASIC1.73□□□□□ -2.13
CDH11P55287 RNU6-436P-201ENST00000516171 114 ntBASIC1.73□□□□□ -2.13
CDH11P55287 RNU6-1146P-201ENST00000516282 102 ntBASIC1.73□□□□□ -2.13
CDH11P55287 RNU6-295P-201ENST00000516901 104 ntBASIC1.73□□□□□ -2.13
CDH11P55287 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.73□□□□□ -2.13
CDH11P55287 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.73□□□□□ -2.13
CDH11P55287 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.73□□□□□ -2.13
CDH11P55287 AC008555.8-201ENST00000623602 2168 ntBASIC1.73□□□□□ -2.13
CDH11P55287 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
CDH11P55287 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CDH11P55287 ZNF702P-202ENST00000434269 1966 ntBASIC1.72□□□□□ -2.13
CDH11P55287 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.72□□□□□ -2.13
CDH11P55287 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.72□□□□□ -2.13
CDH11P55287 RNU6-770P-201ENST00000363929 105 ntBASIC1.72□□□□□ -2.13
CDH11P55287 Y_RNA.222-201ENST00000364264 102 ntBASIC1.72□□□□□ -2.13
CDH11P55287 Y_RNA.286-201ENST00000364813 102 ntBASIC1.72□□□□□ -2.13
CDH11P55287 RNU6-1109P-201ENST00000391187 107 ntBASIC1.72□□□□□ -2.13
CDH11P55287 RNU2-2P-201ENST00000410396 191 ntBASIC1.72□□□□□ -2.13
CDH11P55287 RNA5SP100-201ENST00000410903 110 ntBASIC1.72□□□□□ -2.13
CDH11P55287 RNA5SP59-201ENST00000410922 110 ntBASIC1.72□□□□□ -2.13
CDH11P55287 AL390729.2-201ENST00000416137 156 ntBASIC1.72□□□□□ -2.13
CDH11P55287 HMGN2P19-201ENST00000425149 265 ntBASIC1.72□□□□□ -2.13
CDH11P55287 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.72□□□□□ -2.13
CDH11P55287 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.72□□□□□ -2.13
CDH11P55287 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.72□□□□□ -2.13
CDH11P55287 SNRPGP19-201ENST00000603826 189 ntBASIC1.72□□□□□ -2.13
CDH11P55287 AL627230.6-201ENST00000611129 280 ntBASIC1.72□□□□□ -2.13
CDH11P55287 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.72□□□□□ -2.13
CDH11P55287 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.72□□□□□ -2.13
CDH11P55287 ZNF355P-201ENST00000427301 3216 ntBASIC1.72□□□□□ -2.13
CDH11P55287 RNU6-1266P-201ENST00000362794 105 ntBASIC1.71□□□□□ -2.14
CDH11P55287 snoU2_19.2-201ENST00000363024 80 ntBASIC1.71□□□□□ -2.14
CDH11P55287 Y_RNA.124-201ENST00000363339 93 ntBASIC1.71□□□□□ -2.14
CDH11P55287 SNORA72.2-201ENST00000365028 127 ntBASIC1.71□□□□□ -2.14
CDH11P55287 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.71□□□□□ -2.14
CDH11P55287 SNORA8-201ENST00000384574 139 ntBASIC1.71□□□□□ -2.14
CDH11P55287 AL031003.1-201ENST00000404229 172 ntBASIC1.71□□□□□ -2.14
CDH11P55287 AL445685.2-201ENST00000422551 342 ntBASIC1.71□□□□□ -2.14
CDH11P55287 MTND2P23-201ENST00000422990 651 ntBASIC1.71□□□□□ -2.14
CDH11P55287 AL358176.2-201ENST00000425769 204 ntBASIC1.71□□□□□ -2.14
CDH11P55287 MRPS10P1-201ENST00000448483 130 ntBASIC1.71□□□□□ -2.14
CDH11P55287 SUMO1P2-201ENST00000452524 304 ntBASIC1.71□□□□□ -2.14
CDH11P55287 AC005042.3-201ENST00000453230 174 ntBASIC1.71□□□□□ -2.14
CDH11P55287 HSPE1P25-201ENST00000455484 251 ntBASIC1.71□□□□□ -2.14
CDH11P55287 MTND5P22-201ENST00000458380 195 ntBASIC1.71□□□□□ -2.14
CDH11P55287 RPS26P45-201ENST00000471748 340 ntBASIC1.71□□□□□ -2.14
CDH11P55287 AC098869.1-201ENST00000481627 292 ntBASIC1.71□□□□□ -2.14
CDH11P55287 AL117187.1-201ENST00000555482 181 ntBASIC1.71□□□□□ -2.14
CDH11P55287 AC015712.3-201ENST00000559380 164 ntBASIC1.71□□□□□ -2.14
CDH11P55287 MIR5094-201ENST00000578766 85 ntBASIC1.71□□□□□ -2.14
CDH11P55287 AC008737.2-201ENST00000599446 118 ntBASIC1.71□□□□□ -2.14
CDH11P55287 AC136443.5-201ENST00000603741 370 ntBASIC1.71□□□□□ -2.14
CDH11P55287 AC010900.2-201ENST00000604508 210 ntBASIC1.71□□□□□ -2.14
CDH11P55287 MIR376A1-201ENST00000616574 68 ntBASIC1.71□□□□□ -2.14
CDH11P55287 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.71□□□□□ -2.14
CDH11P55287 U1.36-201ENST00000620684 176 ntBASIC1.71□□□□□ -2.14
CDH11P55287 AC127459.3-201ENST00000624328 466 ntBASIC1.71□□□□□ -2.14
CDH11P55287 Y_RNA.19-201ENST00000362462 99 ntBASIC1.7□□□□□ -2.14
CDH11P55287 RNA5SP276-201ENST00000362580 94 ntBASIC1.7□□□□□ -2.14
CDH11P55287 Y_RNA.64-201ENST00000362845 102 ntBASIC1.7□□□□□ -2.14
CDH11P55287 SNORD113-8-201ENST00000363497 74 ntBASIC1.7□□□□□ -2.14
CDH11P55287 Y_RNA.162-201ENST00000363683 102 ntBASIC1.7□□□□□ -2.14
CDH11P55287 RNU6-117P-201ENST00000365415 107 ntBASIC1.7□□□□□ -2.14
CDH11P55287 RNU6-102P-201ENST00000384485 104 ntBASIC1.7□□□□□ -2.14
CDH11P55287 RNU6-296P-201ENST00000384608 107 ntBASIC1.7□□□□□ -2.14
CDH11P55287 MIR873-201ENST00000401120 77 ntBASIC1.7□□□□□ -2.14
CDH11P55287 AL512604.1-201ENST00000404812 257 ntBASIC1.7□□□□□ -2.14
CDH11P55287 MIR1253-201ENST00000408273 105 ntBASIC1.7□□□□□ -2.14
CDH11P55287 RNU4-30P-201ENST00000410245 143 ntBASIC1.7□□□□□ -2.14
CDH11P55287 RNU2-61P-201ENST00000411069 191 ntBASIC1.7□□□□□ -2.14
CDH11P55287 RPL21P38-201ENST00000418090 167 ntBASIC1.7□□□□□ -2.14
CDH11P55287 AL158823.1-201ENST00000418441 478 ntBASIC1.7□□□□□ -2.14
CDH11P55287 RPL31P63-201ENST00000422565 375 ntBASIC1.7□□□□□ -2.14
CDH11P55287 AL731563.1-201ENST00000442202 214 ntBASIC1.7□□□□□ -2.14
CDH11P55287 MTATP8P1-201ENST00000467115 207 ntBASIC1.7□□□□□ -2.14
CDH11P55287 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.7□□□□□ -2.14
CDH11P55287 MRPS17P9-201ENST00000511924 393 ntBASIC1.7□□□□□ -2.14
CDH11P55287 RNU6-496P-201ENST00000516145 99 ntBASIC1.7□□□□□ -2.14
CDH11P55287 RNU6-327P-201ENST00000516270 127 ntBASIC1.7□□□□□ -2.14
CDH11P55287 RNU6-155P-201ENST00000516347 100 ntBASIC1.7□□□□□ -2.14
CDH11P55287 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.7□□□□□ -2.14
CDH11P55287 AL137100.2-201ENST00000555786 315 ntBASIC1.7□□□□□ -2.14
CDH11P55287 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.7□□□□□ -2.14
CDH11P55287 AC011373.1-201ENST00000607270 237 ntBASIC1.7□□□□□ -2.14
CDH11P55287 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
CDH11P55287 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 194.9 ms