Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC100821.1-201ENST00000523153 2479 ntBASIC1.39□□□□□ -2.19
VCPP55072 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.39□□□□□ -2.19
VCPP55072 RNA5SP361-201ENST00000362686 118 ntBASIC1.39□□□□□ -2.19
VCPP55072 RNU6-1266P-201ENST00000362794 105 ntBASIC1.39□□□□□ -2.19
VCPP55072 Y_RNA.142-201ENST00000363491 102 ntBASIC1.39□□□□□ -2.19
VCPP55072 RNU4-41P-201ENST00000364426 143 ntBASIC1.39□□□□□ -2.19
VCPP55072 Y_RNA.433-201ENST00000384089 102 ntBASIC1.39□□□□□ -2.19
VCPP55072 RNA5SP323-201ENST00000391094 133 ntBASIC1.39□□□□□ -2.19
VCPP55072 SNORA75.6-201ENST00000391318 127 ntBASIC1.39□□□□□ -2.19
VCPP55072 RNU6-1304P-201ENST00000411374 106 ntBASIC1.39□□□□□ -2.19
VCPP55072 TOMM22P2-201ENST00000430735 237 ntBASIC1.39□□□□□ -2.19
VCPP55072 FTH1P12-201ENST00000432137 551 ntBASIC1.39□□□□□ -2.19
VCPP55072 AL135790.2-201ENST00000437701 267 ntBASIC1.39□□□□□ -2.19
VCPP55072 UQCRBP2-201ENST00000447827 297 ntBASIC1.39□□□□□ -2.19
VCPP55072 AL163195.1-201ENST00000496941 348 ntBASIC1.39□□□□□ -2.19
VCPP55072 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.39□□□□□ -2.19
VCPP55072 RNU6-120P-201ENST00000516077 103 ntBASIC1.39□□□□□ -2.19
VCPP55072 RNU6-559P-201ENST00000516151 98 ntBASIC1.39□□□□□ -2.19
VCPP55072 RN7SKP49-201ENST00000516675 260 ntBASIC1.39□□□□□ -2.19
VCPP55072 RNU6-264P-201ENST00000517134 104 ntBASIC1.39□□□□□ -2.19
VCPP55072 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.39□□□□□ -2.19
VCPP55072 AL121890.5-201ENST00000620848 304 ntBASIC1.39□□□□□ -2.19
VCPP55072 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
VCPP55072 SNORA72.1-201ENST00000363485 129 ntBASIC1.38□□□□□ -2.19
VCPP55072 SNORD1A-201ENST00000364968 72 ntBASIC1.38□□□□□ -2.19
VCPP55072 RNU6-1080P-201ENST00000383982 107 ntBASIC1.38□□□□□ -2.19
VCPP55072 RNU6-203P-201ENST00000384038 104 ntBASIC1.38□□□□□ -2.19
VCPP55072 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.38□□□□□ -2.19
VCPP55072 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.38□□□□□ -2.19
VCPP55072 MIR2053-201ENST00000459295 91 ntBASIC1.38□□□□□ -2.19
VCPP55072 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.38□□□□□ -2.19
VCPP55072 RNU1-142P-201ENST00000516682 145 ntBASIC1.38□□□□□ -2.19
VCPP55072 AC022432.1-201ENST00000595739 310 ntBASIC1.38□□□□□ -2.19
VCPP55072 RBM11P1-201ENST00000604951 799 ntBASIC1.38□□□□□ -2.19
VCPP55072 AL359075.3-201ENST00000613288 217 ntBASIC1.38□□□□□ -2.19
VCPP55072 AL357075.2-201ENST00000614906 189 ntBASIC1.38□□□□□ -2.19
VCPP55072 AC104260.1-201ENST00000616660 539 ntBASIC1.38□□□□□ -2.19
VCPP55072 U6.108-201ENST00000637764 58 ntBASIC1.38□□□□□ -2.19
VCPP55072 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
VCPP55072 MIR302D-201ENST00000362275 68 ntBASIC1.37□□□□□ -2.19
VCPP55072 Y_RNA.577-201ENST00000384794 101 ntBASIC1.37□□□□□ -2.19
VCPP55072 ELOCP21-201ENST00000412558 336 ntBASIC1.37□□□□□ -2.19
VCPP55072 PCNPP5-201ENST00000452246 481 ntBASIC1.37□□□□□ -2.19
VCPP55072 RPS29P29-201ENST00000456396 171 ntBASIC1.37□□□□□ -2.19
VCPP55072 SNORD65B-201ENST00000459126 73 ntBASIC1.37□□□□□ -2.19
VCPP55072 snoU13.27-201ENST00000459278 104 ntBASIC1.37□□□□□ -2.19
VCPP55072 AC022493.2-201ENST00000506122 481 ntBASIC1.37□□□□□ -2.19
VCPP55072 AC074133.1-201ENST00000515696 183 ntBASIC1.37□□□□□ -2.19
VCPP55072 AC019176.1-201ENST00000518519 225 ntBASIC1.37□□□□□ -2.19
VCPP55072 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
VCPP55072 AC025253.1-201ENST00000613623 543 ntBASIC1.37□□□□□ -2.19
VCPP55072 U6.73-201ENST00000619194 103 ntBASIC1.37□□□□□ -2.19
VCPP55072 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
VCPP55072 Y_RNA.303-201ENST00000364998 94 ntBASIC1.36□□□□□ -2.19
VCPP55072 SNORA4.2-201ENST00000365313 147 ntBASIC1.36□□□□□ -2.19
VCPP55072 RNU6-1264P-201ENST00000383891 107 ntBASIC1.36□□□□□ -2.19
VCPP55072 RNU6-890P-201ENST00000384121 107 ntBASIC1.36□□□□□ -2.19
VCPP55072 RNU6-318P-201ENST00000384283 103 ntBASIC1.36□□□□□ -2.19
VCPP55072 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
VCPP55072 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.36□□□□□ -2.19
VCPP55072 RNU6-1156P-201ENST00000410365 100 ntBASIC1.36□□□□□ -2.19
VCPP55072 RNU6-1186P-201ENST00000410429 97 ntBASIC1.36□□□□□ -2.19
VCPP55072 AC114482.1-201ENST00000418010 247 ntBASIC1.36□□□□□ -2.19
VCPP55072 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.36□□□□□ -2.19
VCPP55072 MTCO3P10-201ENST00000455912 772 ntBASIC1.36□□□□□ -2.19
VCPP55072 RPL30P15-201ENST00000457129 321 ntBASIC1.36□□□□□ -2.19
VCPP55072 Y_RNA.653-201ENST00000459091 95 ntBASIC1.36□□□□□ -2.19
VCPP55072 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.36□□□□□ -2.19
VCPP55072 RNU6-277P-201ENST00000516272 106 ntBASIC1.36□□□□□ -2.19
VCPP55072 MIR2355-201ENST00000517199 87 ntBASIC1.36□□□□□ -2.19
VCPP55072 MIR3660-201ENST00000584845 100 ntBASIC1.36□□□□□ -2.19
VCPP55072 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.36□□□□□ -2.19
VCPP55072 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.36□□□□□ -2.19
VCPP55072 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
VCPP55072 Y_RNA.387-201ENST00000383918 102 ntBASIC1.35□□□□□ -2.19
VCPP55072 Y_RNA.458-201ENST00000384240 102 ntBASIC1.35□□□□□ -2.19
VCPP55072 RNU6-1297P-201ENST00000384415 104 ntBASIC1.35□□□□□ -2.19
VCPP55072 Y_RNA.498-201ENST00000384460 102 ntBASIC1.35□□□□□ -2.19
VCPP55072 RNA5SP109-201ENST00000391010 116 ntBASIC1.35□□□□□ -2.19
VCPP55072 COX6CP10-201ENST00000416832 224 ntBASIC1.35□□□□□ -2.19
VCPP55072 RPS27P16-201ENST00000425758 201 ntBASIC1.35□□□□□ -2.19
VCPP55072 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.35□□□□□ -2.19
VCPP55072 AC005002.2-201ENST00000438228 269 ntBASIC1.35□□□□□ -2.19
VCPP55072 RPS26P45-201ENST00000471748 340 ntBASIC1.35□□□□□ -2.19
VCPP55072 AC079140.2-201ENST00000506193 142 ntBASIC1.35□□□□□ -2.19
VCPP55072 AC010598.1-201ENST00000510378 103 ntBASIC1.35□□□□□ -2.19
VCPP55072 RNU6-470P-201ENST00000515954 104 ntBASIC1.35□□□□□ -2.19
VCPP55072 Y_RNA.681-201ENST00000516445 113 ntBASIC1.35□□□□□ -2.19
VCPP55072 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.35□□□□□ -2.19
VCPP55072 AC018448.1-201ENST00000552843 316 ntBASIC1.35□□□□□ -2.19
VCPP55072 AC087588.2-201ENST00000617667 426 ntBASIC1.35□□□□□ -2.19
VCPP55072 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.34□□□□□ -2.19
VCPP55072 RNU6-1301P-201ENST00000362724 104 ntBASIC1.34□□□□□ -2.19
VCPP55072 Y_RNA.384-201ENST00000383909 102 ntBASIC1.34□□□□□ -2.19
VCPP55072 MIR222-201ENST00000384992 110 ntBASIC1.34□□□□□ -2.19
VCPP55072 SNORA69.1-201ENST00000390904 137 ntBASIC1.34□□□□□ -2.19
VCPP55072 SNORA40.6-201ENST00000391153 128 ntBASIC1.34□□□□□ -2.19
VCPP55072 MTCYBP4-201ENST00000401524 249 ntBASIC1.34□□□□□ -2.19
VCPP55072 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.34□□□□□ -2.19
VCPP55072 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms