Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 RNU6-443P-201ENST00000384780 107 ntBASIC4.44□□□□□ -1.7
NUBP1P53384 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
NUBP1P53384 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC4.44□□□□□ -1.7
NUBP1P53384 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.44□□□□□ -1.7
NUBP1P53384 AL442644.1-201ENST00000454390 3105 ntBASIC4.44□□□□□ -1.7
NUBP1P53384 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NUBP1P53384 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NUBP1P53384 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NUBP1P53384 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NUBP1P53384 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.44□□□□□ -1.7
NUBP1P53384 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
NUBP1P53384 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
NUBP1P53384 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NUBP1P53384 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NUBP1P53384 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NUBP1P53384 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NUBP1P53384 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
NUBP1P53384 RNU6-833P-201ENST00000363486 107 ntBASIC4.43□□□□□ -1.7
NUBP1P53384 SNORA26.7-201ENST00000391288 122 ntBASIC4.43□□□□□ -1.7
NUBP1P53384 MIR548G-201ENST00000408442 89 ntBASIC4.43□□□□□ -1.7
NUBP1P53384 AC093578.1-201ENST00000415219 368 ntBASIC4.43□□□□□ -1.7
NUBP1P53384 AC069285.2-201ENST00000440210 275 ntBASIC4.43□□□□□ -1.7
NUBP1P53384 AC114801.3-201ENST00000510231 177 ntBASIC4.43□□□□□ -1.7
NUBP1P53384 RNA5SP49-201ENST00000516450 115 ntBASIC4.43□□□□□ -1.7
NUBP1P53384 MIR3200-201ENST00000580767 85 ntBASIC4.43□□□□□ -1.7
NUBP1P53384 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.43□□□□□ -1.7
NUBP1P53384 MIR4791-201ENST00000607666 84 ntBASIC4.43□□□□□ -1.7
NUBP1P53384 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.43□□□□□ -1.7
NUBP1P53384 AP000648.3-201ENST00000623539 4507 ntBASIC4.43□□□□□ -1.7
NUBP1P53384 AL035425.3-201ENST00000564206 4996 ntBASIC4.43□□□□□ -1.7
NUBP1P53384 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NUBP1P53384 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NUBP1P53384 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
NUBP1P53384 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
NUBP1P53384 RNA5SP72-201ENST00000364442 117 ntBASIC4.42□□□□□ -1.7
NUBP1P53384 RNU6-865P-201ENST00000364772 107 ntBASIC4.42□□□□□ -1.7
NUBP1P53384 RNA5SP22-201ENST00000365393 109 ntBASIC4.42□□□□□ -1.7
NUBP1P53384 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NUBP1P53384 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
NUBP1P53384 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NUBP1P53384 RNA5SP73-201ENST00000516744 108 ntBASIC4.42□□□□□ -1.7
NUBP1P53384 SNORD59.2-201ENST00000516873 68 ntBASIC4.42□□□□□ -1.7
NUBP1P53384 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC4.42□□□□□ -1.7
NUBP1P53384 AC140658.3-201ENST00000567603 271 ntBASIC4.42□□□□□ -1.7
NUBP1P53384 AL606490.9-201ENST00000603331 271 ntBASIC4.42□□□□□ -1.7
NUBP1P53384 FAS-AS1.1-201ENST00000615327 126 ntBASIC4.42□□□□□ -1.7
NUBP1P53384 SEPT14P17-201ENST00000617978 177 ntBASIC4.42□□□□□ -1.7
NUBP1P53384 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
NUBP1P53384 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
NUBP1P53384 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
NUBP1P53384 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.41□□□□□ -1.7
NUBP1P53384 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC4.41□□□□□ -1.7
NUBP1P53384 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
NUBP1P53384 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
NUBP1P53384 MAPK10-303ENST00000641324 3959 ntBASIC4.41□□□□□ -1.7
NUBP1P53384 SNORA68.1-201ENST00000364537 132 ntBASIC4.41□□□□□ -1.7
NUBP1P53384 SNORD38.2-201ENST00000384470 69 ntBASIC4.41□□□□□ -1.7
NUBP1P53384 MIR206-201ENST00000384872 86 ntBASIC4.41□□□□□ -1.7
NUBP1P53384 RN7SKP16-201ENST00000410180 299 ntBASIC4.41□□□□□ -1.7
NUBP1P53384 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC4.41□□□□□ -1.7
NUBP1P53384 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC4.41□□□□□ -1.7
NUBP1P53384 AC040958.1-201ENST00000561102 201 ntBASIC4.41□□□□□ -1.7
NUBP1P53384 MIR4513-201ENST00000581077 86 ntBASIC4.41□□□□□ -1.7
NUBP1P53384 AC110741.2-201ENST00000605278 268 ntBASIC4.41□□□□□ -1.7
NUBP1P53384 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NUBP1P53384 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
NUBP1P53384 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.41□□□□□ -1.7
NUBP1P53384 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
NUBP1P53384 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.41□□□□□ -1.7
NUBP1P53384 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.4□□□□□ -1.7
NUBP1P53384 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
NUBP1P53384 SNORA25B-201ENST00000365507 128 ntBASIC4.4□□□□□ -1.71
NUBP1P53384 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
NUBP1P53384 SPINT5P-201ENST00000448174 155 ntBASIC4.4□□□□□ -1.71
NUBP1P53384 RNU7-73P-201ENST00000458743 63 ntBASIC4.4□□□□□ -1.71
NUBP1P53384 RNU1-98P-201ENST00000458992 160 ntBASIC4.4□□□□□ -1.71
NUBP1P53384 AC018868.1-201ENST00000491307 315 ntBASIC4.4□□□□□ -1.71
NUBP1P53384 AC110768.1-201ENST00000509222 400 ntBASIC4.4□□□□□ -1.71
NUBP1P53384 AC026403.1-201ENST00000518938 295 ntBASIC4.4□□□□□ -1.71
NUBP1P53384 PLD1-217ENST00000627725 174 ntTSL 5 BASIC4.4□□□□□ -1.71
NUBP1P53384 AC091152.2-201ENST00000591628 2569 ntBASIC4.4□□□□□ -1.71
NUBP1P53384 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
NUBP1P53384 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
NUBP1P53384 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.39□□□□□ -1.71
NUBP1P53384 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NUBP1P53384 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NUBP1P53384 LINC01355-201ENST00000566551 5444 ntBASIC4.39□□□□□ -1.71
NUBP1P53384 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NUBP1P53384 RNU6-1094P-201ENST00000362416 104 ntBASIC4.39□□□□□ -1.71
NUBP1P53384 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
NUBP1P53384 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.39□□□□□ -1.71
NUBP1P53384 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.39□□□□□ -1.71
NUBP1P53384 AL049873.1-201ENST00000480540 376 ntBASIC4.39□□□□□ -1.71
NUBP1P53384 RNU6-826P-201ENST00000516827 104 ntBASIC4.39□□□□□ -1.71
NUBP1P53384 AL020996.3-201ENST00000606617 222 ntBASIC4.39□□□□□ -1.71
NUBP1P53384 MIR6891-201ENST00000618788 93 ntBASIC4.39□□□□□ -1.71
NUBP1P53384 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NUBP1P53384 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
NUBP1P53384 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.39□□□□□ -1.71
NUBP1P53384 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms