Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 U6.73-201ENST00000619194 103 ntBASIC1.28□□□□□ -2.2
GPC3P51654 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.21
GPC3P51654 MIR410-201ENST00000362222 80 ntBASIC1.27□□□□□ -2.21
GPC3P51654 MIR96-201ENST00000362288 78 ntBASIC1.27□□□□□ -2.21
GPC3P51654 Y_RNA.142-201ENST00000363491 102 ntBASIC1.27□□□□□ -2.21
GPC3P51654 SNORA33-201ENST00000363664 130 ntBASIC1.27□□□□□ -2.21
GPC3P51654 Y_RNA.358-201ENST00000365491 99 ntBASIC1.27□□□□□ -2.21
GPC3P51654 Y_RNA.387-201ENST00000383918 102 ntBASIC1.27□□□□□ -2.21
GPC3P51654 RNU6-1297P-201ENST00000384415 104 ntBASIC1.27□□□□□ -2.21
GPC3P51654 Y_RNA.498-201ENST00000384460 102 ntBASIC1.27□□□□□ -2.21
GPC3P51654 SNORA69.1-201ENST00000390904 137 ntBASIC1.27□□□□□ -2.21
GPC3P51654 RNU6-1001P-201ENST00000411265 100 ntBASIC1.27□□□□□ -2.21
GPC3P51654 Y_RNA.653-201ENST00000459091 95 ntBASIC1.27□□□□□ -2.21
GPC3P51654 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.27□□□□□ -2.21
GPC3P51654 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.27□□□□□ -2.21
GPC3P51654 AC125232.2-201ENST00000592457 143 ntBASIC1.27□□□□□ -2.21
GPC3P51654 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.27□□□□□ -2.21
GPC3P51654 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.27□□□□□ -2.21
GPC3P51654 AC091812.1-201ENST00000432235 1948 ntBASIC1.27□□□□□ -2.21
GPC3P51654 RNA5SP327-201ENST00000362494 101 ntBASIC1.26□□□□□ -2.21
GPC3P51654 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
GPC3P51654 RNA5SP467-201ENST00000391274 118 ntBASIC1.26□□□□□ -2.21
GPC3P51654 RPL21P1-201ENST00000399532 476 ntBASIC1.26□□□□□ -2.21
GPC3P51654 RN7SKP200-201ENST00000410564 320 ntBASIC1.26□□□□□ -2.21
GPC3P51654 RNA5SP475-201ENST00000410568 110 ntBASIC1.26□□□□□ -2.21
GPC3P51654 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.26□□□□□ -2.21
GPC3P51654 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.26□□□□□ -2.21
GPC3P51654 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.26□□□□□ -2.21
GPC3P51654 RNU6-559P-201ENST00000516151 98 ntBASIC1.26□□□□□ -2.21
GPC3P51654 AC022868.1-201ENST00000517767 391 ntBASIC1.26□□□□□ -2.21
GPC3P51654 AL162424.1-201ENST00000602325 221 ntBASIC1.26□□□□□ -2.21
GPC3P51654 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
GPC3P51654 AC073544.1-201ENST00000600110 1595 ntBASIC1.25□□□□□ -2.21
GPC3P51654 SNORA70.7-201ENST00000384159 133 ntBASIC1.25□□□□□ -2.21
GPC3P51654 RNA5SP109-201ENST00000391010 116 ntBASIC1.25□□□□□ -2.21
GPC3P51654 MTCO3P19-201ENST00000415864 321 ntBASIC1.25□□□□□ -2.21
GPC3P51654 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.25□□□□□ -2.21
GPC3P51654 AC099799.1-201ENST00000439809 192 ntBASIC1.25□□□□□ -2.21
GPC3P51654 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.25□□□□□ -2.21
GPC3P51654 SNORD65B-201ENST00000459126 73 ntBASIC1.25□□□□□ -2.21
GPC3P51654 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.25□□□□□ -2.21
GPC3P51654 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.25□□□□□ -2.21
GPC3P51654 AC018448.1-201ENST00000552843 316 ntBASIC1.25□□□□□ -2.21
GPC3P51654 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
GPC3P51654 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.24□□□□□ -2.21
GPC3P51654 Y_RNA.70-201ENST00000362886 110 ntBASIC1.24□□□□□ -2.21
GPC3P51654 RNU6-99P-201ENST00000364721 107 ntBASIC1.24□□□□□ -2.21
GPC3P51654 RNU6-1283P-201ENST00000365314 105 ntBASIC1.24□□□□□ -2.21
GPC3P51654 Y_RNA.474-201ENST00000384341 102 ntBASIC1.24□□□□□ -2.21
GPC3P51654 RNU6-310P-201ENST00000384655 107 ntBASIC1.24□□□□□ -2.21
GPC3P51654 RNU6-1156P-201ENST00000410365 100 ntBASIC1.24□□□□□ -2.21
GPC3P51654 RNU6-1186P-201ENST00000410429 97 ntBASIC1.24□□□□□ -2.21
GPC3P51654 RNU4-14P-201ENST00000410858 122 ntBASIC1.24□□□□□ -2.21
GPC3P51654 Y_RNA.646-201ENST00000410980 101 ntBASIC1.24□□□□□ -2.21
GPC3P51654 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.24□□□□□ -2.21
GPC3P51654 MTND4P28-201ENST00000426217 387 ntBASIC1.24□□□□□ -2.21
GPC3P51654 MRPS10P1-201ENST00000448483 130 ntBASIC1.24□□□□□ -2.21
GPC3P51654 MTND4P17-201ENST00000470444 350 ntBASIC1.24□□□□□ -2.21
GPC3P51654 AC022493.2-201ENST00000506122 481 ntBASIC1.24□□□□□ -2.21
GPC3P51654 RPL21P9-201ENST00000556149 474 ntBASIC1.24□□□□□ -2.21
GPC3P51654 MIR3664-201ENST00000579074 99 ntBASIC1.24□□□□□ -2.21
GPC3P51654 AC005730.3-201ENST00000583067 366 ntBASIC1.24□□□□□ -2.21
GPC3P51654 MIR4438-201ENST00000585271 93 ntBASIC1.24□□□□□ -2.21
GPC3P51654 AL929325.1-201ENST00000603096 117 ntBASIC1.24□□□□□ -2.21
GPC3P51654 AL050343.2-201ENST00000607338 280 ntBASIC1.24□□□□□ -2.21
GPC3P51654 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.24□□□□□ -2.21
GPC3P51654 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.24□□□□□ -2.21
GPC3P51654 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.24□□□□□ -2.21
GPC3P51654 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
GPC3P51654 RNU6-874P-201ENST00000362390 105 ntBASIC1.23□□□□□ -2.21
GPC3P51654 SNORD114-7-201ENST00000362520 77 ntBASIC1.23□□□□□ -2.21
GPC3P51654 SNORA72.1-201ENST00000363485 129 ntBASIC1.23□□□□□ -2.21
GPC3P51654 ELOCP21-201ENST00000412558 336 ntBASIC1.23□□□□□ -2.21
GPC3P51654 AL591704.2-201ENST00000421658 181 ntBASIC1.23□□□□□ -2.21
GPC3P51654 RNU6-625P-201ENST00000459412 107 ntBASIC1.23□□□□□ -2.21
GPC3P51654 RPS27P22-201ENST00000478056 241 ntBASIC1.23□□□□□ -2.21
GPC3P51654 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.23□□□□□ -2.21
GPC3P51654 RNU6-470P-201ENST00000515954 104 ntBASIC1.23□□□□□ -2.21
GPC3P51654 RN7SKP179-201ENST00000516126 217 ntBASIC1.23□□□□□ -2.21
GPC3P51654 RNU6-911P-201ENST00000516523 104 ntBASIC1.23□□□□□ -2.21
GPC3P51654 MIR4801-201ENST00000582704 82 ntBASIC1.23□□□□□ -2.21
GPC3P51654 MIR4295-201ENST00000585286 85 ntBASIC1.23□□□□□ -2.21
GPC3P51654 AC136443.5-201ENST00000603741 370 ntBASIC1.23□□□□□ -2.21
GPC3P51654 MIR1244-1-201ENST00000612829 85 ntBASIC1.23□□□□□ -2.21
GPC3P51654 MIR1244-3-201ENST00000635744 85 ntBASIC1.23□□□□□ -2.21
GPC3P51654 MIR1244-2-201ENST00000636449 85 ntBASIC1.23□□□□□ -2.21
GPC3P51654 MIR3674-201ENST00000636576 68 ntBASIC1.23□□□□□ -2.21
GPC3P51654 MIR1244-4-202ENST00000636813 85 ntBASIC1.23□□□□□ -2.21
GPC3P51654 RNU6-1301P-201ENST00000362724 104 ntBASIC1.22□□□□□ -2.21
GPC3P51654 RNU6-490P-201ENST00000362985 107 ntBASIC1.22□□□□□ -2.21
GPC3P51654 SNORD114-27-201ENST00000363766 70 ntBASIC1.22□□□□□ -2.21
GPC3P51654 Y_RNA.191-201ENST00000363972 113 ntBASIC1.22□□□□□ -2.21
GPC3P51654 Y_RNA.259-201ENST00000364619 101 ntBASIC1.22□□□□□ -2.21
GPC3P51654 SNORD114-22-201ENST00000365423 72 ntBASIC1.22□□□□□ -2.21
GPC3P51654 RNU6-1031P-201ENST00000384773 107 ntBASIC1.22□□□□□ -2.21
GPC3P51654 MRPL42P3-201ENST00000401492 326 ntBASIC1.22□□□□□ -2.21
GPC3P51654 MTCO2P27-201ENST00000420740 428 ntBASIC1.22□□□□□ -2.21
GPC3P51654 AC093019.1-201ENST00000443135 252 ntBASIC1.22□□□□□ -2.21
GPC3P51654 ELOCP24-201ENST00000456370 334 ntBASIC1.22□□□□□ -2.21
GPC3P51654 RPL30P15-201ENST00000457129 321 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms