Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 MIR4659A-201ENST00000580269 81 ntBASIC1.58□□□□□ -2.16
LHX1P48742 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.58□□□□□ -2.16
LHX1P48742 AC004467.1-201ENST00000615678 330 ntBASIC1.58□□□□□ -2.16
LHX1P48742 U6.92-201ENST00000636464 89 ntBASIC1.58□□□□□ -2.16
LHX1P48742 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
LHX1P48742 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
LHX1P48742 AC100821.1-201ENST00000523153 2479 ntBASIC1.57□□□□□ -2.16
LHX1P48742 SNORA27.1-201ENST00000362604 124 ntBASIC1.57□□□□□ -2.16
LHX1P48742 RNU4-13P-201ENST00000364019 141 ntBASIC1.57□□□□□ -2.16
LHX1P48742 RPL21P1-201ENST00000399532 476 ntBASIC1.57□□□□□ -2.16
LHX1P48742 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.57□□□□□ -2.16
LHX1P48742 AP1B1P2-201ENST00000416196 106 ntBASIC1.57□□□□□ -2.16
LHX1P48742 AC018865.2-201ENST00000423631 129 ntBASIC1.57□□□□□ -2.16
LHX1P48742 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.57□□□□□ -2.16
LHX1P48742 AL606517.2-201ENST00000442855 241 ntBASIC1.57□□□□□ -2.16
LHX1P48742 SUMO1P2-201ENST00000452524 304 ntBASIC1.57□□□□□ -2.16
LHX1P48742 snoU13.9-201ENST00000458927 103 ntBASIC1.57□□□□□ -2.16
LHX1P48742 RNU7-34P-201ENST00000459394 64 ntBASIC1.57□□□□□ -2.16
LHX1P48742 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.57□□□□□ -2.16
LHX1P48742 AC097462.1-201ENST00000514125 324 ntBASIC1.57□□□□□ -2.16
LHX1P48742 RNU7-172P-201ENST00000517125 64 ntBASIC1.57□□□□□ -2.16
LHX1P48742 DNAJC19P9-201ENST00000555084 351 ntBASIC1.57□□□□□ -2.16
LHX1P48742 AL080274.1-201ENST00000605565 220 ntBASIC1.57□□□□□ -2.16
LHX1P48742 AC011476.5-201ENST00000615594 130 ntBASIC1.57□□□□□ -2.16
LHX1P48742 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.57□□□□□ -2.16
LHX1P48742 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.56□□□□□ -2.16
LHX1P48742 RNU1-22P-201ENST00000363334 158 ntBASIC1.56□□□□□ -2.16
LHX1P48742 Y_RNA.509-201ENST00000384506 99 ntBASIC1.56□□□□□ -2.16
LHX1P48742 RNU6-950P-201ENST00000384651 107 ntBASIC1.56□□□□□ -2.16
LHX1P48742 MRPL35P1-201ENST00000404272 572 ntBASIC1.56□□□□□ -2.16
LHX1P48742 AL354695.1-201ENST00000427935 228 ntBASIC1.56□□□□□ -2.16
LHX1P48742 AC245047.3-201ENST00000429428 127 ntBASIC1.56□□□□□ -2.16
LHX1P48742 RPS27P1-201ENST00000450552 247 ntBASIC1.56□□□□□ -2.16
LHX1P48742 RNU7-94P-201ENST00000459576 63 ntBASIC1.56□□□□□ -2.16
LHX1P48742 AC005908.1-201ENST00000468701 347 ntBASIC1.56□□□□□ -2.16
LHX1P48742 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.56□□□□□ -2.16
LHX1P48742 RNU4-77P-201ENST00000516692 156 ntBASIC1.56□□□□□ -2.16
LHX1P48742 AC005176.2-201ENST00000596933 147 ntBASIC1.56□□□□□ -2.16
LHX1P48742 C8orf59P2-201ENST00000603441 271 ntBASIC1.56□□□□□ -2.16
LHX1P48742 AC073413.2-201ENST00000604332 360 ntBASIC1.56□□□□□ -2.16
LHX1P48742 AC022217.4-201ENST00000604389 163 ntBASIC1.56□□□□□ -2.16
LHX1P48742 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.56□□□□□ -2.16
LHX1P48742 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.56□□□□□ -2.16
LHX1P48742 AL606534.2-204ENST00000635008 178 ntBASIC1.56□□□□□ -2.16
LHX1P48742 ZNF209P-201ENST00000593450 2304 ntBASIC1.56□□□□□ -2.16
LHX1P48742 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
LHX1P48742 Y_RNA.243-201ENST00000364481 109 ntBASIC1.55□□□□□ -2.16
LHX1P48742 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.55□□□□□ -2.16
LHX1P48742 Y_RNA.419-201ENST00000384041 102 ntBASIC1.55□□□□□ -2.16
LHX1P48742 RNU11-5P-201ENST00000391216 129 ntBASIC1.55□□□□□ -2.16
LHX1P48742 MIR873-201ENST00000401120 77 ntBASIC1.55□□□□□ -2.16
LHX1P48742 SDAD1P3-201ENST00000427380 333 ntBASIC1.55□□□□□ -2.16
LHX1P48742 AL160004.2-201ENST00000432935 350 ntBASIC1.55□□□□□ -2.16
LHX1P48742 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.55□□□□□ -2.16
LHX1P48742 RNU7-95P-201ENST00000459222 64 ntBASIC1.55□□□□□ -2.16
LHX1P48742 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.55□□□□□ -2.16
LHX1P48742 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.55□□□□□ -2.16
LHX1P48742 HSBP1P1-201ENST00000555205 166 ntBASIC1.55□□□□□ -2.16
LHX1P48742 RPL21P9-201ENST00000556149 474 ntBASIC1.55□□□□□ -2.16
LHX1P48742 AC055872.1-201ENST00000570978 278 ntBASIC1.55□□□□□ -2.16
LHX1P48742 MIR5188-201ENST00000583467 113 ntBASIC1.55□□□□□ -2.16
LHX1P48742 AL929325.1-201ENST00000603096 117 ntBASIC1.55□□□□□ -2.16
LHX1P48742 AC006380.1-201ENST00000603598 186 ntBASIC1.55□□□□□ -2.16
LHX1P48742 AC016925.2-201ENST00000605108 242 ntBASIC1.55□□□□□ -2.16
LHX1P48742 AC005828.6-201ENST00000606610 232 ntBASIC1.55□□□□□ -2.16
LHX1P48742 AC006157.1-201ENST00000611750 366 ntBASIC1.55□□□□□ -2.16
LHX1P48742 AC240442.1-201ENST00000616055 283 ntBASIC1.55□□□□□ -2.16
LHX1P48742 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
LHX1P48742 AC018630.2-201ENST00000534866 2403 ntBASIC1.55□□□□□ -2.16
LHX1P48742 U8.1-201ENST00000362843 134 ntBASIC1.54□□□□□ -2.16
LHX1P48742 RNU6-626P-201ENST00000363354 107 ntBASIC1.54□□□□□ -2.16
LHX1P48742 RNU6-20P-201ENST00000384106 107 ntBASIC1.54□□□□□ -2.16
LHX1P48742 MIR934-201ENST00000401241 83 ntBASIC1.54□□□□□ -2.16
LHX1P48742 AC010154.1-201ENST00000425857 269 ntBASIC1.54□□□□□ -2.16
LHX1P48742 SNORA40.14-201ENST00000516543 86 ntBASIC1.54□□□□□ -2.16
LHX1P48742 RNU2-12P-201ENST00000517216 168 ntBASIC1.54□□□□□ -2.16
LHX1P48742 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.54□□□□□ -2.16
LHX1P48742 AL161670.1-201ENST00000554348 137 ntBASIC1.54□□□□□ -2.16
LHX1P48742 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.54□□□□□ -2.16
LHX1P48742 SNORA77B-201ENST00000578179 125 ntBASIC1.54□□□□□ -2.16
LHX1P48742 RPS29P30-201ENST00000600975 111 ntBASIC1.54□□□□□ -2.16
LHX1P48742 AL050343.2-201ENST00000607338 280 ntBASIC1.54□□□□□ -2.16
LHX1P48742 AC090971.5-201ENST00000621102 293 ntBASIC1.54□□□□□ -2.16
LHX1P48742 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
LHX1P48742 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.54□□□□□ -2.16
LHX1P48742 MIR369-201ENST00000362155 70 ntBASIC1.53□□□□□ -2.16
LHX1P48742 Y_RNA.112-201ENST00000363250 102 ntBASIC1.53□□□□□ -2.16
LHX1P48742 RNA5SP363-201ENST00000365072 115 ntBASIC1.53□□□□□ -2.16
LHX1P48742 RNY1P14-201ENST00000384426 108 ntBASIC1.53□□□□□ -2.16
LHX1P48742 RNU6-997P-201ENST00000384725 107 ntBASIC1.53□□□□□ -2.16
LHX1P48742 MRPL42P3-201ENST00000401492 326 ntBASIC1.53□□□□□ -2.16
LHX1P48742 RN7SKP200-201ENST00000410564 320 ntBASIC1.53□□□□□ -2.16
LHX1P48742 Y_RNA.604-201ENST00000410574 102 ntBASIC1.53□□□□□ -2.16
LHX1P48742 SNRPGP13-201ENST00000442212 177 ntBASIC1.53□□□□□ -2.16
LHX1P48742 HSPE1P24-201ENST00000450782 238 ntBASIC1.53□□□□□ -2.16
LHX1P48742 RPS26P55-201ENST00000471178 356 ntBASIC1.53□□□□□ -2.16
LHX1P48742 RNU6-1278P-201ENST00000516130 107 ntBASIC1.53□□□□□ -2.16
LHX1P48742 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.53□□□□□ -2.16
LHX1P48742 snoU13.31-201ENST00000607291 104 ntBASIC1.53□□□□□ -2.16
LHX1P48742 SNORD58B-201ENST00000607313 66 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms