Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.8□□□□□ -2.12
APOBEC1P41238 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.8□□□□□ -2.12
APOBEC1P41238 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.8□□□□□ -2.12
APOBEC1P41238 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.79□□□□□ -2.12
APOBEC1P41238 RNA5SP126-201ENST00000365092 109 ntBASIC1.79□□□□□ -2.12
APOBEC1P41238 Y_RNA.602-201ENST00000410535 92 ntBASIC1.79□□□□□ -2.12
APOBEC1P41238 MTND2P23-201ENST00000422990 651 ntBASIC1.79□□□□□ -2.12
APOBEC1P41238 AC024067.1-201ENST00000426199 223 ntBASIC1.79□□□□□ -2.12
APOBEC1P41238 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.79□□□□□ -2.12
APOBEC1P41238 RPL23AP3-201ENST00000453844 468 ntBASIC1.79□□□□□ -2.12
APOBEC1P41238 RNA5SP57-201ENST00000459463 123 ntBASIC1.79□□□□□ -2.12
APOBEC1P41238 RPS26P55-201ENST00000471178 356 ntBASIC1.79□□□□□ -2.12
APOBEC1P41238 HMGB3P17-201ENST00000504195 649 ntBASIC1.79□□□□□ -2.12
APOBEC1P41238 RNU6-436P-201ENST00000516171 114 ntBASIC1.79□□□□□ -2.12
APOBEC1P41238 RNU6-1045P-201ENST00000516321 107 ntBASIC1.79□□□□□ -2.12
APOBEC1P41238 RNU6-966P-201ENST00000516479 104 ntBASIC1.79□□□□□ -2.12
APOBEC1P41238 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.79□□□□□ -2.12
APOBEC1P41238 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.79□□□□□ -2.12
APOBEC1P41238 AC084364.2-201ENST00000546924 395 ntBASIC1.79□□□□□ -2.12
APOBEC1P41238 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.79□□□□□ -2.12
APOBEC1P41238 MIR5089-201ENST00000580047 84 ntBASIC1.79□□□□□ -2.12
APOBEC1P41238 AC136443.5-201ENST00000603741 370 ntBASIC1.79□□□□□ -2.12
APOBEC1P41238 PRR13P7-201ENST00000605538 430 ntBASIC1.79□□□□□ -2.12
APOBEC1P41238 AC010615.1-201ENST00000594254 1764 ntBASIC1.79□□□□□ -2.12
APOBEC1P41238 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.79□□□□□ -2.12
APOBEC1P41238 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
APOBEC1P41238 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
APOBEC1P41238 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.78□□□□□ -2.12
APOBEC1P41238 RNU4-90P-201ENST00000362773 141 ntBASIC1.78□□□□□ -2.12
APOBEC1P41238 Y_RNA.64-201ENST00000362845 102 ntBASIC1.78□□□□□ -2.12
APOBEC1P41238 RNU1-22P-201ENST00000363334 158 ntBASIC1.78□□□□□ -2.12
APOBEC1P41238 Y_RNA.329-201ENST00000365209 107 ntBASIC1.78□□□□□ -2.12
APOBEC1P41238 RNU6-505P-201ENST00000384427 107 ntBASIC1.78□□□□□ -2.12
APOBEC1P41238 RNU6-1109P-201ENST00000391187 107 ntBASIC1.78□□□□□ -2.12
APOBEC1P41238 RNU2-2P-201ENST00000410396 191 ntBASIC1.78□□□□□ -2.12
APOBEC1P41238 RNU6-121P-201ENST00000410525 99 ntBASIC1.78□□□□□ -2.12
APOBEC1P41238 AL356379.1-201ENST00000414105 126 ntBASIC1.78□□□□□ -2.12
APOBEC1P41238 EBAG9P1-201ENST00000418955 543 ntBASIC1.78□□□□□ -2.12
APOBEC1P41238 POLR2KP2-201ENST00000438155 177 ntBASIC1.78□□□□□ -2.12
APOBEC1P41238 DYNLT3P2-201ENST00000442517 295 ntBASIC1.78□□□□□ -2.12
APOBEC1P41238 AL118496.2-201ENST00000448300 230 ntBASIC1.78□□□□□ -2.12
APOBEC1P41238 MTATP8P1-201ENST00000467115 207 ntBASIC1.78□□□□□ -2.12
APOBEC1P41238 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.78□□□□□ -2.12
APOBEC1P41238 AC097462.1-201ENST00000514125 324 ntBASIC1.78□□□□□ -2.12
APOBEC1P41238 RNU6-1278P-201ENST00000516130 107 ntBASIC1.78□□□□□ -2.12
APOBEC1P41238 RNU6-635P-201ENST00000516651 102 ntBASIC1.78□□□□□ -2.12
APOBEC1P41238 RNU7-172P-201ENST00000517125 64 ntBASIC1.78□□□□□ -2.12
APOBEC1P41238 AP003733.2-201ENST00000529409 171 ntBASIC1.78□□□□□ -2.12
APOBEC1P41238 RPL21P9-201ENST00000556149 474 ntBASIC1.78□□□□□ -2.12
APOBEC1P41238 AC005034.5-201ENST00000604219 466 ntBASIC1.78□□□□□ -2.12
APOBEC1P41238 AL773524.1-201ENST00000614065 229 ntBASIC1.78□□□□□ -2.12
APOBEC1P41238 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.12
APOBEC1P41238 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.77□□□□□ -2.13
APOBEC1P41238 Y_RNA.105-201ENST00000363182 111 ntBASIC1.77□□□□□ -2.13
APOBEC1P41238 Y_RNA.124-201ENST00000363339 93 ntBASIC1.77□□□□□ -2.13
APOBEC1P41238 SNORA33-201ENST00000363664 130 ntBASIC1.77□□□□□ -2.13
APOBEC1P41238 Y_RNA.383-201ENST00000383855 97 ntBASIC1.77□□□□□ -2.13
APOBEC1P41238 RNU6-713P-201ENST00000384761 107 ntBASIC1.77□□□□□ -2.13
APOBEC1P41238 AC019129.1-201ENST00000403786 261 ntBASIC1.77□□□□□ -2.13
APOBEC1P41238 RNU6-710P-201ENST00000410424 105 ntBASIC1.77□□□□□ -2.13
APOBEC1P41238 RNU2-7P-201ENST00000410794 178 ntBASIC1.77□□□□□ -2.13
APOBEC1P41238 RNU2-61P-201ENST00000411069 191 ntBASIC1.77□□□□□ -2.13
APOBEC1P41238 RPL23AP6-201ENST00000446637 472 ntBASIC1.77□□□□□ -2.13
APOBEC1P41238 HSPE1P13-201ENST00000451143 297 ntBASIC1.77□□□□□ -2.13
APOBEC1P41238 RNA5SP233-201ENST00000459153 113 ntBASIC1.77□□□□□ -2.13
APOBEC1P41238 AC010409.1-201ENST00000487382 476 ntBASIC1.77□□□□□ -2.13
APOBEC1P41238 RPS29P21-201ENST00000496272 170 ntBASIC1.77□□□□□ -2.13
APOBEC1P41238 AL163195.1-201ENST00000496941 348 ntBASIC1.77□□□□□ -2.13
APOBEC1P41238 RNU6-496P-201ENST00000516145 99 ntBASIC1.77□□□□□ -2.13
APOBEC1P41238 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.77□□□□□ -2.13
APOBEC1P41238 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
APOBEC1P41238 AL117187.1-201ENST00000555482 181 ntBASIC1.77□□□□□ -2.13
APOBEC1P41238 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.77□□□□□ -2.13
APOBEC1P41238 AC127459.3-201ENST00000624328 466 ntBASIC1.77□□□□□ -2.13
APOBEC1P41238 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
APOBEC1P41238 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.76□□□□□ -2.13
APOBEC1P41238 SNORD81.1-201ENST00000363064 77 ntBASIC1.76□□□□□ -2.13
APOBEC1P41238 RNU6-112P-201ENST00000363599 104 ntBASIC1.76□□□□□ -2.13
APOBEC1P41238 Y_RNA.176-201ENST00000363815 109 ntBASIC1.76□□□□□ -2.13
APOBEC1P41238 RNU6-806P-201ENST00000365147 105 ntBASIC1.76□□□□□ -2.13
APOBEC1P41238 MIR520A-201ENST00000384862 85 ntBASIC1.76□□□□□ -2.13
APOBEC1P41238 Y_RNA.581-201ENST00000391017 97 ntBASIC1.76□□□□□ -2.13
APOBEC1P41238 RNA5SP100-201ENST00000410903 110 ntBASIC1.76□□□□□ -2.13
APOBEC1P41238 RNA5SP59-201ENST00000410922 110 ntBASIC1.76□□□□□ -2.13
APOBEC1P41238 AC244636.1-201ENST00000421152 228 ntBASIC1.76□□□□□ -2.13
APOBEC1P41238 AC245047.4-201ENST00000433189 144 ntBASIC1.76□□□□□ -2.13
APOBEC1P41238 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.76□□□□□ -2.13
APOBEC1P41238 RNU7-94P-201ENST00000459576 63 ntBASIC1.76□□□□□ -2.13
APOBEC1P41238 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.76□□□□□ -2.13
APOBEC1P41238 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.76□□□□□ -2.13
APOBEC1P41238 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.76□□□□□ -2.13
APOBEC1P41238 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.76□□□□□ -2.13
APOBEC1P41238 AC008269.2-201ENST00000561915 1105 ntBASIC1.76□□□□□ -2.13
APOBEC1P41238 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.76□□□□□ -2.13
APOBEC1P41238 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.76□□□□□ -2.13
APOBEC1P41238 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.76□□□□□ -2.13
APOBEC1P41238 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.76□□□□□ -2.13
APOBEC1P41238 U6.108-201ENST00000637764 58 ntBASIC1.76□□□□□ -2.13
APOBEC1P41238 Y_RNA.26-201ENST00000362539 101 ntBASIC1.75□□□□□ -2.13
APOBEC1P41238 RNU6-238P-201ENST00000363313 106 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms