Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 DNAJC19P2-201ENST00000593340 302 ntBASIC3.05□□□□□ -1.92
CCNFP41002 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.05□□□□□ -1.92
CCNFP41002 U4atac.1-201ENST00000618345 95 ntBASIC3.05□□□□□ -1.92
CCNFP41002 MIR3651-201ENST00000630427 90 ntBASIC3.05□□□□□ -1.92
CCNFP41002 Y_RNA.332-201ENST00000365271 113 ntBASIC3.04□□□□□ -1.92
CCNFP41002 RNU6-643P-201ENST00000384018 107 ntBASIC3.04□□□□□ -1.92
CCNFP41002 Y_RNA.521-201ENST00000384560 114 ntBASIC3.04□□□□□ -1.92
CCNFP41002 Y_RNA.568-201ENST00000384742 113 ntBASIC3.04□□□□□ -1.92
CCNFP41002 RNU6-1186P-201ENST00000410429 97 ntBASIC3.04□□□□□ -1.92
CCNFP41002 RNU2-48P-201ENST00000410694 191 ntBASIC3.04□□□□□ -1.92
CCNFP41002 AC097462.1-201ENST00000514125 324 ntBASIC3.04□□□□□ -1.92
CCNFP41002 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.04□□□□□ -1.92
CCNFP41002 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.04□□□□□ -1.92
CCNFP41002 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.04□□□□□ -1.92
CCNFP41002 YPEL5P2-201ENST00000605553 359 ntBASIC3.04□□□□□ -1.92
CCNFP41002 MAPK10-266ENST00000641066 6555 ntBASIC3.04□□□□□ -1.92
CCNFP41002 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.04□□□□□ -1.92
CCNFP41002 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
CCNFP41002 RNU1-22P-201ENST00000363334 158 ntBASIC3.03□□□□□ -1.92
CCNFP41002 RNU6-117P-201ENST00000365415 107 ntBASIC3.03□□□□□ -1.92
CCNFP41002 SNORA20-201ENST00000384662 132 ntBASIC3.03□□□□□ -1.92
CCNFP41002 RNU6-417P-201ENST00000384712 107 ntBASIC3.03□□□□□ -1.92
CCNFP41002 MIR887-201ENST00000401258 79 ntBASIC3.03□□□□□ -1.92
CCNFP41002 AL512604.1-201ENST00000404812 257 ntBASIC3.03□□□□□ -1.92
CCNFP41002 RPS29P6-201ENST00000438196 145 ntBASIC3.03□□□□□ -1.92
CCNFP41002 AP001486.1-201ENST00000463339 476 ntBASIC3.03□□□□□ -1.92
CCNFP41002 RNU7-121P-201ENST00000516604 62 ntBASIC3.03□□□□□ -1.92
CCNFP41002 AL929325.1-201ENST00000603096 117 ntBASIC3.03□□□□□ -1.92
CCNFP41002 AL049861.1-201ENST00000603130 150 ntBASIC3.03□□□□□ -1.92
CCNFP41002 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.02□□□□□ -1.93
CCNFP41002 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.02□□□□□ -1.93
CCNFP41002 RNU6-81P-201ENST00000365608 104 ntBASIC3.02□□□□□ -1.93
CCNFP41002 MIR592-201ENST00000384959 97 ntBASIC3.02□□□□□ -1.93
CCNFP41002 MIR569-201ENST00000385228 96 ntBASIC3.02□□□□□ -1.93
CCNFP41002 Y_RNA.621-201ENST00000411065 96 ntBASIC3.02□□□□□ -1.93
CCNFP41002 AC060773.1-201ENST00000421698 310 ntBASIC3.02□□□□□ -1.93
CCNFP41002 RPL39P40-201ENST00000445481 146 ntBASIC3.02□□□□□ -1.93
CCNFP41002 RN7SL504P-201ENST00000494496 287 ntBASIC3.02□□□□□ -1.93
CCNFP41002 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.02□□□□□ -1.93
CCNFP41002 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.02□□□□□ -1.93
CCNFP41002 RNU6-856P-201ENST00000516959 98 ntBASIC3.02□□□□□ -1.93
CCNFP41002 RN7SKP57-201ENST00000517248 293 ntBASIC3.02□□□□□ -1.93
CCNFP41002 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.02□□□□□ -1.93
CCNFP41002 AC100821.1-201ENST00000523153 2479 ntBASIC3.02□□□□□ -1.93
CCNFP41002 AC108206.1-201ENST00000570186 4159 ntBASIC3.02□□□□□ -1.93
CCNFP41002 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
CCNFP41002 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.01□□□□□ -1.93
CCNFP41002 SNORD56.5-201ENST00000364281 72 ntBASIC3.01□□□□□ -1.93
CCNFP41002 SNORD113-1-201ENST00000365321 69 ntBASIC3.01□□□□□ -1.93
CCNFP41002 SNORA25B-201ENST00000365507 128 ntBASIC3.01□□□□□ -1.93
CCNFP41002 RNU6-1080P-201ENST00000383982 107 ntBASIC3.01□□□□□ -1.93
CCNFP41002 SNORA72-201ENST00000384339 132 ntBASIC3.01□□□□□ -1.93
CCNFP41002 SNORD67-201ENST00000390833 111 ntBASIC3.01□□□□□ -1.93
CCNFP41002 SNORA79-201ENST00000408376 140 ntBASIC3.01□□□□□ -1.93
CCNFP41002 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.01□□□□□ -1.93
CCNFP41002 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.01□□□□□ -1.93
CCNFP41002 AC009238.1-201ENST00000442165 424 ntBASIC3.01□□□□□ -1.93
CCNFP41002 AC009237.6-201ENST00000446969 424 ntBASIC3.01□□□□□ -1.93
CCNFP41002 AC018868.1-201ENST00000491307 315 ntBASIC3.01□□□□□ -1.93
CCNFP41002 RNU6-1041P-201ENST00000516254 102 ntBASIC3.01□□□□□ -1.93
CCNFP41002 SNORA31.26-201ENST00000517250 137 ntBASIC3.01□□□□□ -1.93
CCNFP41002 UBL5P2-201ENST00000583788 219 ntBASIC3.01□□□□□ -1.93
CCNFP41002 U2.20-201ENST00000613956 192 ntBASIC3.01□□□□□ -1.93
CCNFP41002 AC007318.2-201ENST00000620999 243 ntBASIC3.01□□□□□ -1.93
CCNFP41002 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3□□□□□ -1.93
CCNFP41002 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3□□□□□ -1.93
CCNFP41002 ZNF702P-202ENST00000434269 1966 ntBASIC3□□□□□ -1.93
CCNFP41002 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
CCNFP41002 SNORD45.3-201ENST00000363836 72 ntBASIC3□□□□□ -1.93
CCNFP41002 RNU6-1117P-201ENST00000384525 104 ntBASIC3□□□□□ -1.93
CCNFP41002 AL590004.2-201ENST00000404787 371 ntBASIC3□□□□□ -1.93
CCNFP41002 RPL30P13-201ENST00000418873 348 ntBASIC3□□□□□ -1.93
CCNFP41002 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3□□□□□ -1.93
CCNFP41002 RPS4XP11-201ENST00000446897 772 ntBASIC3□□□□□ -1.93
CCNFP41002 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3□□□□□ -1.93
CCNFP41002 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CCNFP41002 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
CCNFP41002 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.99□□□□□ -1.93
CCNFP41002 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CCNFP41002 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.99□□□□□ -1.93
CCNFP41002 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
CCNFP41002 RNU6-674P-201ENST00000363831 107 ntBASIC2.99□□□□□ -1.93
CCNFP41002 RNU6-1081P-201ENST00000384537 107 ntBASIC2.99□□□□□ -1.93
CCNFP41002 CYCSP49-201ENST00000420810 319 ntBASIC2.99□□□□□ -1.93
CCNFP41002 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.99□□□□□ -1.93
CCNFP41002 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.99□□□□□ -1.93
CCNFP41002 AC011406.1-201ENST00000512440 370 ntBASIC2.99□□□□□ -1.93
CCNFP41002 RNU6-1146P-201ENST00000516282 102 ntBASIC2.99□□□□□ -1.93
CCNFP41002 AC011604.1-201ENST00000545978 196 ntBASIC2.99□□□□□ -1.93
CCNFP41002 RPL23AP91-201ENST00000569211 455 ntBASIC2.99□□□□□ -1.93
CCNFP41002 AC073413.2-201ENST00000604332 360 ntBASIC2.99□□□□□ -1.93
CCNFP41002 MIR6844-201ENST00000637122 62 ntBASIC2.99□□□□□ -1.93
CCNFP41002 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CCNFP41002 AC010332.2-201ENST00000613083 1904 ntBASIC2.99□□□□□ -1.93
CCNFP41002 MIR340-201ENST00000362125 95 ntBASIC2.98□□□□□ -1.93
CCNFP41002 MIR22-201ENST00000362190 85 ntBASIC2.98□□□□□ -1.93
CCNFP41002 RNY3P5-201ENST00000384127 102 ntBASIC2.98□□□□□ -1.93
CCNFP41002 Y_RNA.586-201ENST00000391146 98 ntBASIC2.98□□□□□ -1.93
CCNFP41002 RNA5SP496-201ENST00000391240 109 ntBASIC2.98□□□□□ -1.93
CCNFP41002 RNU6-257P-201ENST00000410238 98 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms