Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 Y_RNA.594-201ENST00000410373 140 ntBASIC0.92□□□□□ -2.26
RORAP35398 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.92□□□□□ -2.26
RORAP35398 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.92□□□□□ -2.26
RORAP35398 OR9P1P-201ENST00000496431 281 ntBASIC0.92□□□□□ -2.26
RORAP35398 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.92□□□□□ -2.26
RORAP35398 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.92□□□□□ -2.26
RORAP35398 AC011352.1-201ENST00000512300 793 ntBASIC0.92□□□□□ -2.26
RORAP35398 Y_RNA.670-201ENST00000516255 105 ntBASIC0.92□□□□□ -2.26
RORAP35398 RNU6-917P-201ENST00000516294 104 ntBASIC0.92□□□□□ -2.26
RORAP35398 RNA5SP168-201ENST00000516642 112 ntBASIC0.92□□□□□ -2.26
RORAP35398 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.92□□□□□ -2.26
RORAP35398 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.92□□□□□ -2.26
RORAP35398 AC091178.2-201ENST00000584401 117 ntBASIC0.92□□□□□ -2.26
RORAP35398 AC018638.8-201ENST00000588755 281 ntBASIC0.92□□□□□ -2.26
RORAP35398 AC080078.2-201ENST00000603766 501 ntBASIC0.92□□□□□ -2.26
RORAP35398 AL513534.2-201ENST00000603836 250 ntBASIC0.92□□□□□ -2.26
RORAP35398 SNORA28-201ENST00000606769 126 ntBASIC0.92□□□□□ -2.26
RORAP35398 RNU4-76P-201ENST00000364509 141 ntBASIC0.91□□□□□ -2.26
RORAP35398 RNU6-1264P-201ENST00000383891 107 ntBASIC0.91□□□□□ -2.26
RORAP35398 RNU6-424P-201ENST00000384367 105 ntBASIC0.91□□□□□ -2.26
RORAP35398 RNU6-1215P-201ENST00000384441 102 ntBASIC0.91□□□□□ -2.26
RORAP35398 MIR489-201ENST00000384923 84 ntBASIC0.91□□□□□ -2.26
RORAP35398 U8.16-201ENST00000391279 133 ntBASIC0.91□□□□□ -2.26
RORAP35398 MTCO3P19-201ENST00000415864 321 ntBASIC0.91□□□□□ -2.26
RORAP35398 RPL39P28-201ENST00000465655 155 ntBASIC0.91□□□□□ -2.26
RORAP35398 AC091021.1-201ENST00000468051 388 ntBASIC0.91□□□□□ -2.26
RORAP35398 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.91□□□□□ -2.26
RORAP35398 RNU6-718P-201ENST00000516166 105 ntBASIC0.91□□□□□ -2.26
RORAP35398 RN7SKP49-201ENST00000516675 260 ntBASIC0.91□□□□□ -2.26
RORAP35398 RNU6-1016P-201ENST00000516689 94 ntBASIC0.91□□□□□ -2.26
RORAP35398 RNU7-172P-201ENST00000517125 64 ntBASIC0.91□□□□□ -2.26
RORAP35398 AL121579.1-201ENST00000555129 305 ntBASIC0.91□□□□□ -2.26
RORAP35398 AC090617.3-201ENST00000573670 475 ntBASIC0.91□□□□□ -2.26
RORAP35398 MIR6857-201ENST00000613267 93 ntBASIC0.91□□□□□ -2.26
RORAP35398 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.91□□□□□ -2.26
RORAP35398 MIR6788-201ENST00000618842 66 ntBASIC0.91□□□□□ -2.26
RORAP35398 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.9□□□□□ -2.26
RORAP35398 SNORA27.1-201ENST00000362604 124 ntBASIC0.9□□□□□ -2.27
RORAP35398 Y_RNA.86-201ENST00000363020 111 ntBASIC0.9□□□□□ -2.27
RORAP35398 RNU6-454P-201ENST00000364292 107 ntBASIC0.9□□□□□ -2.27
RORAP35398 Y_RNA.339-201ENST00000365325 102 ntBASIC0.9□□□□□ -2.27
RORAP35398 Y_RNA.363-201ENST00000365529 113 ntBASIC0.9□□□□□ -2.27
RORAP35398 Y_RNA.364-201ENST00000365532 101 ntBASIC0.9□□□□□ -2.27
RORAP35398 Y_RNA.557-201ENST00000384680 107 ntBASIC0.9□□□□□ -2.27
RORAP35398 MIR548F5-201ENST00000408421 86 ntBASIC0.9□□□□□ -2.27
RORAP35398 AC018865.2-201ENST00000423631 129 ntBASIC0.9□□□□□ -2.27
RORAP35398 AC048334.1-201ENST00000477975 159 ntBASIC0.9□□□□□ -2.27
RORAP35398 AC069439.1-201ENST00000494739 167 ntBASIC0.9□□□□□ -2.27
RORAP35398 RNA5SP220-201ENST00000516298 104 ntBASIC0.9□□□□□ -2.27
RORAP35398 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.9□□□□□ -2.27
RORAP35398 AC011604.1-201ENST00000545978 196 ntBASIC0.9□□□□□ -2.27
RORAP35398 MIR3973-201ENST00000579824 107 ntBASIC0.9□□□□□ -2.27
RORAP35398 AL078603.1-201ENST00000603824 313 ntBASIC0.9□□□□□ -2.27
RORAP35398 AC211469.2-201ENST00000605461 205 ntBASIC0.9□□□□□ -2.27
RORAP35398 AC005592.1-201ENST00000566527 1640 ntBASIC0.89□□□□□ -2.27
RORAP35398 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.89□□□□□ -2.27
RORAP35398 MIRLET7C-201ENST00000362160 84 ntBASIC0.89□□□□□ -2.27
RORAP35398 MIR410-201ENST00000362222 80 ntBASIC0.89□□□□□ -2.27
RORAP35398 SNORA1B-201ENST00000362535 133 ntBASIC0.89□□□□□ -2.27
RORAP35398 RNU6-117P-201ENST00000365415 107 ntBASIC0.89□□□□□ -2.27
RORAP35398 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.89□□□□□ -2.27
RORAP35398 RNU6-42P-201ENST00000384165 107 ntBASIC0.89□□□□□ -2.27
RORAP35398 RNU6-318P-201ENST00000384283 103 ntBASIC0.89□□□□□ -2.27
RORAP35398 RNU11-5P-201ENST00000391216 129 ntBASIC0.89□□□□□ -2.27
RORAP35398 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.89□□□□□ -2.27
RORAP35398 POLR2J4-204ENST00000418424 324 ntBASIC0.89□□□□□ -2.27
RORAP35398 AL139396.1-201ENST00000421137 167 ntBASIC0.89□□□□□ -2.27
RORAP35398 AL353997.1-201ENST00000432936 108 ntBASIC0.89□□□□□ -2.27
RORAP35398 RPS3AP52-201ENST00000435639 297 ntBASIC0.89□□□□□ -2.27
RORAP35398 UQCRBP2-201ENST00000447827 297 ntBASIC0.89□□□□□ -2.27
RORAP35398 RNA5SP20-201ENST00000515976 84 ntBASIC0.89□□□□□ -2.27
RORAP35398 SNORA31.2-201ENST00000516019 134 ntBASIC0.89□□□□□ -2.27
RORAP35398 SNORA70.22-201ENST00000517160 124 ntBASIC0.89□□□□□ -2.27
RORAP35398 MIR151B-201ENST00000584249 96 ntBASIC0.89□□□□□ -2.27
RORAP35398 AC005828.6-201ENST00000606610 232 ntBASIC0.89□□□□□ -2.27
RORAP35398 GHRLOS.1-201ENST00000610995 70 ntBASIC0.89□□□□□ -2.27
RORAP35398 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
RORAP35398 AC073544.1-201ENST00000600110 1595 ntBASIC0.88□□□□□ -2.27
RORAP35398 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
RORAP35398 RNU6-199P-201ENST00000362954 107 ntBASIC0.88□□□□□ -2.27
RORAP35398 RNY1P16-201ENST00000363063 111 ntBASIC0.88□□□□□ -2.27
RORAP35398 Y_RNA.124-201ENST00000363339 93 ntBASIC0.88□□□□□ -2.27
RORAP35398 Y_RNA.404-201ENST00000383978 102 ntBASIC0.88□□□□□ -2.27
RORAP35398 MIR548J-201ENST00000408833 112 ntBASIC0.88□□□□□ -2.27
RORAP35398 RNU6-1050P-201ENST00000410388 107 ntBASIC0.88□□□□□ -2.27
RORAP35398 RNU6-1054P-201ENST00000411293 104 ntBASIC0.88□□□□□ -2.27
RORAP35398 AC093850.1-201ENST00000454121 251 ntBASIC0.88□□□□□ -2.27
RORAP35398 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.88□□□□□ -2.27
RORAP35398 AC105758.1-201ENST00000506038 399 ntBASIC0.88□□□□□ -2.27
RORAP35398 SNORA31.4-201ENST00000516049 129 ntBASIC0.88□□□□□ -2.27
RORAP35398 SCARNA16.2-201ENST00000516520 172 ntBASIC0.88□□□□□ -2.27
RORAP35398 RNU6-341P-201ENST00000516973 96 ntBASIC0.88□□□□□ -2.27
RORAP35398 AC018448.1-201ENST00000552843 316 ntBASIC0.88□□□□□ -2.27
RORAP35398 AC093913.1-201ENST00000614178 329 ntBASIC0.88□□□□□ -2.27
RORAP35398 U6.115-201ENST00000636045 103 ntBASIC0.88□□□□□ -2.27
RORAP35398 Y_RNA.265-201ENST00000364677 108 ntBASIC0.87□□□□□ -2.27
RORAP35398 RNU6-407P-201ENST00000365280 104 ntBASIC0.87□□□□□ -2.27
RORAP35398 MIR1277-201ENST00000408536 78 ntBASIC0.87□□□□□ -2.27
RORAP35398 RNU5A-5P-201ENST00000411054 116 ntBASIC0.87□□□□□ -2.27
RORAP35398 AC074085.1-201ENST00000413598 418 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 178.1 ms