Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 RNU6-160P-201ENST00000384591 107 ntBASIC2.09□□□□□ -2.07
RFC1P35251 RNU6-21P-201ENST00000384710 107 ntBASIC2.09□□□□□ -2.07
RFC1P35251 MIR1302-3-201ENST00000408128 138 ntBASIC2.09□□□□□ -2.07
RFC1P35251 MIR1302-6-201ENST00000408466 90 ntBASIC2.09□□□□□ -2.07
RFC1P35251 BX510359.4-201ENST00000423750 193 ntBASIC2.09□□□□□ -2.07
RFC1P35251 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.09□□□□□ -2.07
RFC1P35251 RNU1-131P-201ENST00000458943 161 ntBASIC2.09□□□□□ -2.07
RFC1P35251 TRBV12-1-201ENST00000479785 344 ntBASIC2.09□□□□□ -2.07
RFC1P35251 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.09□□□□□ -2.07
RFC1P35251 MRPS17P9-201ENST00000511924 393 ntBASIC2.09□□□□□ -2.07
RFC1P35251 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.09□□□□□ -2.07
RFC1P35251 AL096840.1-201ENST00000603287 93 ntBASIC2.09□□□□□ -2.07
RFC1P35251 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
RFC1P35251 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
RFC1P35251 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
RFC1P35251 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
RFC1P35251 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
RFC1P35251 ZNF355P-201ENST00000427301 3216 ntBASIC2.08□□□□□ -2.08
RFC1P35251 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
RFC1P35251 RNA5SP138-201ENST00000365098 114 ntBASIC2.08□□□□□ -2.08
RFC1P35251 RNU6-290P-201ENST00000365212 101 ntBASIC2.08□□□□□ -2.08
RFC1P35251 Y_RNA.383-201ENST00000383855 97 ntBASIC2.08□□□□□ -2.08
RFC1P35251 SNORA20B-201ENST00000384220 132 ntBASIC2.08□□□□□ -2.08
RFC1P35251 RNA5SP465-201ENST00000391195 109 ntBASIC2.08□□□□□ -2.08
RFC1P35251 AL031003.1-201ENST00000404229 172 ntBASIC2.08□□□□□ -2.08
RFC1P35251 MTND2P29-201ENST00000438595 412 ntBASIC2.08□□□□□ -2.08
RFC1P35251 MRPS10P1-201ENST00000448483 130 ntBASIC2.08□□□□□ -2.08
RFC1P35251 RNU6-1338P-201ENST00000516328 91 ntBASIC2.08□□□□□ -2.08
RFC1P35251 AC023157.2-201ENST00000540596 141 ntBASIC2.08□□□□□ -2.08
RFC1P35251 MIR4299-201ENST00000577899 72 ntBASIC2.08□□□□□ -2.08
RFC1P35251 MIR3145-201ENST00000580727 82 ntBASIC2.08□□□□□ -2.08
RFC1P35251 CENPCP1-201ENST00000533085 2578 ntBASIC2.07□□□□□ -2.08
RFC1P35251 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.07□□□□□ -2.08
RFC1P35251 Y_RNA.124-201ENST00000363339 93 ntBASIC2.07□□□□□ -2.08
RFC1P35251 Y_RNA.237-201ENST00000364439 102 ntBASIC2.07□□□□□ -2.08
RFC1P35251 Y_RNA.287-201ENST00000364853 94 ntBASIC2.07□□□□□ -2.08
RFC1P35251 RNU6-1240P-201ENST00000365155 104 ntBASIC2.07□□□□□ -2.08
RFC1P35251 Y_RNA.329-201ENST00000365209 107 ntBASIC2.07□□□□□ -2.08
RFC1P35251 MIR1283-2-201ENST00000408621 87 ntBASIC2.07□□□□□ -2.08
RFC1P35251 AL121890.1-201ENST00000435457 205 ntBASIC2.07□□□□□ -2.08
RFC1P35251 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.07□□□□□ -2.08
RFC1P35251 RPL23AP6-201ENST00000446637 472 ntBASIC2.07□□□□□ -2.08
RFC1P35251 SNORD127-201ENST00000458892 86 ntBASIC2.07□□□□□ -2.08
RFC1P35251 AC011406.1-201ENST00000512440 370 ntBASIC2.07□□□□□ -2.08
RFC1P35251 RNU1-41P-201ENST00000516161 162 ntBASIC2.07□□□□□ -2.08
RFC1P35251 RNU1-48P-201ENST00000516400 162 ntBASIC2.07□□□□□ -2.08
RFC1P35251 DEFB108E-201ENST00000524692 240 ntBASIC2.07□□□□□ -2.08
RFC1P35251 DEFB117-201ENST00000602356 141 ntBASIC2.07□□□□□ -2.08
RFC1P35251 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.07□□□□□ -2.08
RFC1P35251 AL159152.1-201ENST00000635019 2587 ntBASIC2.07□□□□□ -2.08
RFC1P35251 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
RFC1P35251 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.06□□□□□ -2.08
RFC1P35251 Y_RNA.556-201ENST00000384677 113 ntBASIC2.06□□□□□ -2.08
RFC1P35251 MIR676-201ENST00000390702 67 ntBASIC2.06□□□□□ -2.08
RFC1P35251 AL117342.1-201ENST00000404861 406 ntBASIC2.06□□□□□ -2.08
RFC1P35251 RNU2-38P-201ENST00000410856 79 ntBASIC2.06□□□□□ -2.08
RFC1P35251 HMGN2P34-201ENST00000437647 269 ntBASIC2.06□□□□□ -2.08
RFC1P35251 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
RFC1P35251 RPS29P21-201ENST00000496272 170 ntBASIC2.06□□□□□ -2.08
RFC1P35251 AC010598.1-201ENST00000510378 103 ntBASIC2.06□□□□□ -2.08
RFC1P35251 RNU6-1041P-201ENST00000516254 102 ntBASIC2.06□□□□□ -2.08
RFC1P35251 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.06□□□□□ -2.08
RFC1P35251 AC006380.1-201ENST00000603598 186 ntBASIC2.06□□□□□ -2.08
RFC1P35251 AL773524.1-201ENST00000614065 229 ntBASIC2.06□□□□□ -2.08
RFC1P35251 RNU1-58P-201ENST00000362413 163 ntBASIC2.05□□□□□ -2.08
RFC1P35251 SNORA27.1-201ENST00000362604 124 ntBASIC2.05□□□□□ -2.08
RFC1P35251 Y_RNA.136-201ENST00000363444 102 ntBASIC2.05□□□□□ -2.08
RFC1P35251 RNU6-702P-201ENST00000364982 107 ntBASIC2.05□□□□□ -2.08
RFC1P35251 Y_RNA.569-201ENST00000384749 103 ntBASIC2.05□□□□□ -2.08
RFC1P35251 RNU2-61P-201ENST00000411069 191 ntBASIC2.05□□□□□ -2.08
RFC1P35251 AC008134.1-201ENST00000420943 193 ntBASIC2.05□□□□□ -2.08
RFC1P35251 POLR2KP2-201ENST00000438155 177 ntBASIC2.05□□□□□ -2.08
RFC1P35251 MTND1P19-201ENST00000511780 315 ntBASIC2.05□□□□□ -2.08
RFC1P35251 SUMO2P18-201ENST00000518873 252 ntBASIC2.05□□□□□ -2.08
RFC1P35251 AC027419.1-201ENST00000522976 328 ntBASIC2.05□□□□□ -2.08
RFC1P35251 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.05□□□□□ -2.08
RFC1P35251 uc_338.20-201ENST00000621563 178 ntBASIC2.05□□□□□ -2.08
RFC1P35251 MIR338-201ENST00000636369 67 ntBASIC2.05□□□□□ -2.08
RFC1P35251 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
RFC1P35251 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.05□□□□□ -2.08
RFC1P35251 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
RFC1P35251 RNU6-324P-201ENST00000363957 106 ntBASIC2.04□□□□□ -2.08
RFC1P35251 MIR597-201ENST00000384968 97 ntBASIC2.04□□□□□ -2.08
RFC1P35251 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
RFC1P35251 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.04□□□□□ -2.08
RFC1P35251 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
RFC1P35251 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.04□□□□□ -2.08
RFC1P35251 HMGN2P19-201ENST00000425149 265 ntBASIC2.04□□□□□ -2.08
RFC1P35251 MTCO1P5-201ENST00000433573 344 ntBASIC2.04□□□□□ -2.08
RFC1P35251 AC099677.2-201ENST00000436385 175 ntBASIC2.04□□□□□ -2.08
RFC1P35251 AL135790.2-201ENST00000437701 267 ntBASIC2.04□□□□□ -2.08
RFC1P35251 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.04□□□□□ -2.08
RFC1P35251 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.04□□□□□ -2.08
RFC1P35251 Y_RNA.680-201ENST00000516441 93 ntBASIC2.04□□□□□ -2.08
RFC1P35251 SCARNA24.2-201ENST00000516968 130 ntBASIC2.04□□□□□ -2.08
RFC1P35251 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.04□□□□□ -2.08
RFC1P35251 AC004817.2-201ENST00000561794 651 ntBASIC2.04□□□□□ -2.08
RFC1P35251 MIR3684-201ENST00000579779 74 ntBASIC2.04□□□□□ -2.08
RFC1P35251 AC012433.1-201ENST00000588916 398 ntBASIC2.04□□□□□ -2.08
RFC1P35251 AC062037.2-201ENST00000610137 73 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms