Protein–RNA interactions for Protein: P28370

SMARCA1, Probable global transcription activator SNF2L1, humanhuman

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1P28370 AC010598.1-201ENST00000510378 103 ntBASIC2.52□□□□□ -2.01
SMARCA1P28370 RNU6-388P-201ENST00000517012 105 ntBASIC2.52□□□□□ -2.01
SMARCA1P28370 RNU6-389P-201ENST00000517048 105 ntBASIC2.52□□□□□ -2.01
SMARCA1P28370 AC027419.1-201ENST00000522976 328 ntBASIC2.52□□□□□ -2.01
SMARCA1P28370 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.52□□□□□ -2.01
SMARCA1P28370 AC005357.1-201ENST00000588399 301 ntBASIC2.52□□□□□ -2.01
SMARCA1P28370 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SMARCA1P28370 AP006437.1-201ENST00000641440 3685 ntBASIC2.52□□□□□ -2.01
SMARCA1P28370 ZNF355P-201ENST00000427301 3216 ntBASIC2.51□□□□□ -2.01
SMARCA1P28370 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SMARCA1P28370 Y_RNA.54-201ENST00000362766 105 ntBASIC2.51□□□□□ -2.01
SMARCA1P28370 RNU6-1164P-201ENST00000364428 107 ntBASIC2.51□□□□□ -2.01
SMARCA1P28370 RNU6-740P-201ENST00000364734 105 ntBASIC2.51□□□□□ -2.01
SMARCA1P28370 SNORA20.1-201ENST00000364790 130 ntBASIC2.51□□□□□ -2.01
SMARCA1P28370 RNU6-1240P-201ENST00000365155 104 ntBASIC2.51□□□□□ -2.01
SMARCA1P28370 MIR29C-201ENST00000385231 88 ntBASIC2.51□□□□□ -2.01
SMARCA1P28370 SNORD23.1-201ENST00000408212 104 ntBASIC2.51□□□□□ -2.01
SMARCA1P28370 RNU2-61P-201ENST00000411069 191 ntBASIC2.51□□□□□ -2.01
SMARCA1P28370 AL135790.2-201ENST00000437701 267 ntBASIC2.51□□□□□ -2.01
SMARCA1P28370 AC104435.1-201ENST00000483483 166 ntBASIC2.51□□□□□ -2.01
SMARCA1P28370 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.51□□□□□ -2.01
SMARCA1P28370 RNU6-237P-201ENST00000515985 71 ntBASIC2.51□□□□□ -2.01
SMARCA1P28370 SNORA27.4-201ENST00000516650 95 ntBASIC2.51□□□□□ -2.01
SMARCA1P28370 RNU6-111P-201ENST00000517179 105 ntBASIC2.51□□□□□ -2.01
SMARCA1P28370 SNORA31.25-201ENST00000517242 134 ntBASIC2.51□□□□□ -2.01
SMARCA1P28370 MIR3684-201ENST00000579779 74 ntBASIC2.51□□□□□ -2.01
SMARCA1P28370 AC037487.3-201ENST00000606668 112 ntBASIC2.51□□□□□ -2.01
SMARCA1P28370 U2.15-201ENST00000611544 191 ntBASIC2.51□□□□□ -2.01
SMARCA1P28370 U2.16-201ENST00000613119 191 ntBASIC2.51□□□□□ -2.01
SMARCA1P28370 U2.12-201ENST00000613778 191 ntBASIC2.51□□□□□ -2.01
SMARCA1P28370 U2.20-201ENST00000613956 192 ntBASIC2.51□□□□□ -2.01
SMARCA1P28370 U2.9-201ENST00000615427 191 ntBASIC2.51□□□□□ -2.01
SMARCA1P28370 U2.11-201ENST00000616345 191 ntBASIC2.51□□□□□ -2.01
SMARCA1P28370 U2.2-201ENST00000616535 191 ntBASIC2.51□□□□□ -2.01
SMARCA1P28370 U2.3-201ENST00000617785 191 ntBASIC2.51□□□□□ -2.01
SMARCA1P28370 U2.19-201ENST00000618602 191 ntBASIC2.51□□□□□ -2.01
SMARCA1P28370 RNU2-1-201ENST00000618664 191 ntBASIC2.51□□□□□ -2.01
SMARCA1P28370 U2.6-201ENST00000619225 191 ntBASIC2.51□□□□□ -2.01
SMARCA1P28370 U2.5-201ENST00000619465 191 ntBASIC2.51□□□□□ -2.01
SMARCA1P28370 U2.10-201ENST00000620268 191 ntBASIC2.51□□□□□ -2.01
SMARCA1P28370 MIR219B-201ENST00000637023 88 ntBASIC2.51□□□□□ -2.01
SMARCA1P28370 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SMARCA1P28370 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SMARCA1P28370 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.5□□□□□ -2.01
SMARCA1P28370 SNORA27.1-201ENST00000362604 124 ntBASIC2.5□□□□□ -2.01
SMARCA1P28370 Y_RNA.44-201ENST00000362676 108 ntBASIC2.5□□□□□ -2.01
SMARCA1P28370 HMGN2P39-201ENST00000398005 273 ntBASIC2.5□□□□□ -2.01
SMARCA1P28370 RNU6-651P-201ENST00000411040 105 ntBASIC2.5□□□□□ -2.01
SMARCA1P28370 AC008134.1-201ENST00000420943 193 ntBASIC2.5□□□□□ -2.01
SMARCA1P28370 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SMARCA1P28370 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.5□□□□□ -2.01
SMARCA1P28370 MIR4648-201ENST00000580107 72 ntBASIC2.5□□□□□ -2.01
SMARCA1P28370 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.5□□□□□ -2.01
SMARCA1P28370 AC090425.1-201ENST00000610007 140 ntBASIC2.5□□□□□ -2.01
SMARCA1P28370 AC078938.1-201ENST00000620993 318 ntBASIC2.5□□□□□ -2.01
SMARCA1P28370 AL159152.1-201ENST00000635019 2587 ntBASIC2.49□□□□□ -2.01
SMARCA1P28370 RNU6-514P-201ENST00000384208 107 ntBASIC2.49□□□□□ -2.01
SMARCA1P28370 RNU6-662P-201ENST00000384253 104 ntBASIC2.49□□□□□ -2.01
SMARCA1P28370 SNORD58.1-201ENST00000391313 66 ntBASIC2.49□□□□□ -2.01
SMARCA1P28370 MIR873-201ENST00000401120 77 ntBASIC2.49□□□□□ -2.01
SMARCA1P28370 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.49□□□□□ -2.01
SMARCA1P28370 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.49□□□□□ -2.01
SMARCA1P28370 SUMO1P2-201ENST00000452524 304 ntBASIC2.49□□□□□ -2.01
SMARCA1P28370 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.49□□□□□ -2.01
SMARCA1P28370 AL512605.2-201ENST00000592972 256 ntBASIC2.49□□□□□ -2.01
SMARCA1P28370 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.49□□□□□ -2.01
SMARCA1P28370 MIR7843-201ENST00000622274 79 ntBASIC2.49□□□□□ -2.01
SMARCA1P28370 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SMARCA1P28370 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SMARCA1P28370 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
SMARCA1P28370 UBE2WP1-201ENST00000362030 340 ntBASIC2.48□□□□□ -2.01
SMARCA1P28370 SNORD115-3-201ENST00000363100 82 ntBASIC2.48□□□□□ -2.01
SMARCA1P28370 Y_RNA.117-201ENST00000363294 101 ntBASIC2.48□□□□□ -2.01
SMARCA1P28370 Y_RNA.172-201ENST00000363765 102 ntBASIC2.48□□□□□ -2.01
SMARCA1P28370 RNA5SP493-201ENST00000364115 91 ntBASIC2.48□□□□□ -2.01
SMARCA1P28370 Y_RNA.275-201ENST00000364726 110 ntBASIC2.48□□□□□ -2.01
SMARCA1P28370 RNU6-338P-201ENST00000383888 105 ntBASIC2.48□□□□□ -2.01
SMARCA1P28370 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
SMARCA1P28370 RPL23AP7-203ENST00000449021 469 ntBASIC2.48□□□□□ -2.01
SMARCA1P28370 RNU1-131P-201ENST00000458943 161 ntBASIC2.48□□□□□ -2.01
SMARCA1P28370 Y_RNA.638-201ENST00000459374 113 ntBASIC2.48□□□□□ -2.01
SMARCA1P28370 AC011406.1-201ENST00000512440 370 ntBASIC2.48□□□□□ -2.01
SMARCA1P28370 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.48□□□□□ -2.01
SMARCA1P28370 MIR4529-201ENST00000578110 78 ntBASIC2.48□□□□□ -2.01
SMARCA1P28370 MIR5002-201ENST00000584713 97 ntBASIC2.48□□□□□ -2.01
SMARCA1P28370 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.48□□□□□ -2.01
SMARCA1P28370 MIR6873-201ENST00000622788 63 ntBASIC2.48□□□□□ -2.01
SMARCA1P28370 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
SMARCA1P28370 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.48□□□□□ -2.01
SMARCA1P28370 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SMARCA1P28370 SNORD114-7-201ENST00000362520 77 ntBASIC2.47□□□□□ -2.01
SMARCA1P28370 Y_RNA.76-201ENST00000362931 109 ntBASIC2.47□□□□□ -2.01
SMARCA1P28370 Y_RNA.217-201ENST00000364214 105 ntBASIC2.47□□□□□ -2.01
SMARCA1P28370 RNU6-1318P-201ENST00000365389 103 ntBASIC2.47□□□□□ -2.01
SMARCA1P28370 RNU6-160P-201ENST00000384591 107 ntBASIC2.47□□□□□ -2.01
SMARCA1P28370 MIR518A2-201ENST00000384966 87 ntBASIC2.47□□□□□ -2.01
SMARCA1P28370 SNORA11.4-201ENST00000408823 129 ntBASIC2.47□□□□□ -2.01
SMARCA1P28370 RNU2-14P-201ENST00000411053 191 ntBASIC2.47□□□□□ -2.01
SMARCA1P28370 Y_RNA.641-201ENST00000459414 105 ntBASIC2.47□□□□□ -2.01
SMARCA1P28370 AC079804.2-201ENST00000490376 200 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms