Protein–RNA interactions for Protein: P19623

SRM, Spermidine synthase, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP19623 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.32□□□□□ -2.36
SRMP19623 HMGN2P26-201ENST00000463169 339 ntBASIC0.32□□□□□ -2.36
SRMP19623 RPL30P10-201ENST00000488148 337 ntBASIC0.32□□□□□ -2.36
SRMP19623 AC018710.1-201ENST00000506509 158 ntBASIC0.32□□□□□ -2.36
SRMP19623 AC046134.1-201ENST00000514454 666 ntBASIC0.32□□□□□ -2.36
SRMP19623 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
SRMP19623 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
SRMP19623 RNU6-254P-201ENST00000363377 107 ntBASIC0.31□□□□□ -2.36
SRMP19623 RNU6-1264P-201ENST00000383891 107 ntBASIC0.31□□□□□ -2.36
SRMP19623 RNU6-1105P-201ENST00000384774 107 ntBASIC0.31□□□□□ -2.36
SRMP19623 MIR514A2-201ENST00000385131 88 ntBASIC0.31□□□□□ -2.36
SRMP19623 MIR514A3-201ENST00000385132 88 ntBASIC0.31□□□□□ -2.36
SRMP19623 MIR1185-1-201ENST00000408598 86 ntBASIC0.31□□□□□ -2.36
SRMP19623 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.31□□□□□ -2.36
SRMP19623 RNA5SP134-201ENST00000516492 96 ntBASIC0.31□□□□□ -2.36
SRMP19623 RNU6-229P-201ENST00000516614 102 ntBASIC0.31□□□□□ -2.36
SRMP19623 RNU6-1116P-201ENST00000517269 99 ntBASIC0.31□□□□□ -2.36
SRMP19623 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.31□□□□□ -2.36
SRMP19623 AC243829.6-201ENST00000612652 106 ntBASIC0.31□□□□□ -2.36
SRMP19623 AC127459.3-201ENST00000624328 466 ntBASIC0.31□□□□□ -2.36
SRMP19623 AC097520.1-201ENST00000624435 385 ntBASIC0.31□□□□□ -2.36
SRMP19623 AL589743.1-201ENST00000551932 2712 ntBASIC0.31□□□□□ -2.36
SRMP19623 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
SRMP19623 SNORD105-201ENST00000386910 85 ntBASIC0.3□□□□□ -2.36
SRMP19623 RNU1-139P-201ENST00000391307 165 ntBASIC0.3□□□□□ -2.36
SRMP19623 USMG5P1-201ENST00000425964 177 ntBASIC0.3□□□□□ -2.36
SRMP19623 AL137792.2-201ENST00000443484 235 ntBASIC0.3□□□□□ -2.36
SRMP19623 SUMO1P2-201ENST00000452524 304 ntBASIC0.3□□□□□ -2.36
SRMP19623 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.3□□□□□ -2.36
SRMP19623 RNU6-496P-201ENST00000516145 99 ntBASIC0.3□□□□□ -2.36
SRMP19623 SNORA74.3-201ENST00000517108 154 ntBASIC0.3□□□□□ -2.36
SRMP19623 AF235103.2-201ENST00000525753 346 ntBASIC0.3□□□□□ -2.36
SRMP19623 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.3□□□□□ -2.36
SRMP19623 MTATP6P24-201ENST00000576835 677 ntBASIC0.3□□□□□ -2.36
SRMP19623 AL008636.1-201ENST00000625038 1018 ntBASIC0.3□□□□□ -2.36
SRMP19623 SNORD114-23-201ENST00000363536 72 ntBASIC0.29□□□□□ -2.36
SRMP19623 Y_RNA.231-201ENST00000364358 102 ntBASIC0.29□□□□□ -2.36
SRMP19623 SNORD14.1-201ENST00000365609 90 ntBASIC0.29□□□□□ -2.36
SRMP19623 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.29□□□□□ -2.36
SRMP19623 MIR216A-201ENST00000385063 110 ntBASIC0.29□□□□□ -2.36
SRMP19623 MIR136-201ENST00000385207 82 ntBASIC0.29□□□□□ -2.36
SRMP19623 MIR936-201ENST00000401264 98 ntBASIC0.29□□□□□ -2.36
SRMP19623 PCNPP5-201ENST00000452246 481 ntBASIC0.29□□□□□ -2.36
SRMP19623 RNU6-1132P-201ENST00000459214 107 ntBASIC0.29□□□□□ -2.36
SRMP19623 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.29□□□□□ -2.36
SRMP19623 RNU6-405P-201ENST00000516637 110 ntBASIC0.29□□□□□ -2.36
SRMP19623 Y_RNA.695-201ENST00000516715 107 ntBASIC0.29□□□□□ -2.36
SRMP19623 RNU6-1096P-201ENST00000517089 102 ntBASIC0.29□□□□□ -2.36
SRMP19623 AC036111.3-201ENST00000526389 112 ntBASIC0.29□□□□□ -2.36
SRMP19623 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.29□□□□□ -2.36
SRMP19623 LRRC34P1-201ENST00000542742 915 ntBASIC0.29□□□□□ -2.36
SRMP19623 RNU6-94P-201ENST00000607728 107 ntBASIC0.29□□□□□ -2.36
SRMP19623 AC092954.2-201ENST00000609103 430 ntBASIC0.29□□□□□ -2.36
SRMP19623 AC134026.1-201ENST00000623249 2239 ntBASIC0.29□□□□□ -2.36
SRMP19623 SNORA25.3-201ENST00000363205 127 ntBASIC0.28□□□□□ -2.36
SRMP19623 SNORD113.3-201ENST00000364630 78 ntBASIC0.28□□□□□ -2.36
SRMP19623 RNU6-342P-201ENST00000384521 104 ntBASIC0.28□□□□□ -2.36
SRMP19623 AC243428.1-201ENST00000421099 264 ntBASIC0.28□□□□□ -2.36
SRMP19623 PIGPP3-201ENST00000425307 415 ntBASIC0.28□□□□□ -2.36
SRMP19623 MTCO2P12-201ENST00000427426 682 ntBASIC0.28□□□□□ -2.36
SRMP19623 AC098934.3-201ENST00000430450 190 ntBASIC0.28□□□□□ -2.36
SRMP19623 AC083904.1-201ENST00000487828 231 ntBASIC0.28□□□□□ -2.36
SRMP19623 RNU6-1114P-201ENST00000516022 107 ntBASIC0.28□□□□□ -2.36
SRMP19623 RNU7-43P-201ENST00000516554 64 ntBASIC0.28□□□□□ -2.36
SRMP19623 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC0.28□□□□□ -2.36
SRMP19623 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC0.28□□□□□ -2.36
SRMP19623 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.28□□□□□ -2.36
SRMP19623 MIR5696-201ENST00000578474 85 ntBASIC0.28□□□□□ -2.36
SRMP19623 AC011712.1-201ENST00000588959 234 ntBASIC0.28□□□□□ -2.36
SRMP19623 AC019193.3-201ENST00000609144 554 ntBASIC0.28□□□□□ -2.36
SRMP19623 AC073114.1-201ENST00000612027 490 ntBASIC0.28□□□□□ -2.36
SRMP19623 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.28□□□□□ -2.36
SRMP19623 SNORD68-201ENST00000363214 84 ntBASIC0.27□□□□□ -2.37
SRMP19623 VTRNA1-3-201ENST00000365645 89 ntBASIC0.27□□□□□ -2.37
SRMP19623 RNU6-1297P-201ENST00000384415 104 ntBASIC0.27□□□□□ -2.37
SRMP19623 MIR517A-201ENST00000385001 87 ntBASIC0.27□□□□□ -2.37
SRMP19623 MIR873-201ENST00000401120 77 ntBASIC0.27□□□□□ -2.37
SRMP19623 MIR1827-201ENST00000408549 66 ntBASIC0.27□□□□□ -2.37
SRMP19623 MIR1298-201ENST00000408783 112 ntBASIC0.27□□□□□ -2.37
SRMP19623 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC0.27□□□□□ -2.37
SRMP19623 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.27□□□□□ -2.37
SRMP19623 ERLEC1P1-201ENST00000433806 578 ntBASIC0.27□□□□□ -2.37
SRMP19623 RNU6-956P-201ENST00000458868 103 ntBASIC0.27□□□□□ -2.37
SRMP19623 AC114811.1-201ENST00000507207 168 ntBASIC0.27□□□□□ -2.37
SRMP19623 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.27□□□□□ -2.37
SRMP19623 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.27□□□□□ -2.37
SRMP19623 MIR4711-201ENST00000578274 70 ntBASIC0.27□□□□□ -2.37
SRMP19623 MIR3908-201ENST00000579798 126 ntBASIC0.27□□□□□ -2.37
SRMP19623 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.27□□□□□ -2.37
SRMP19623 MTND5P16-201ENST00000460269 1703 ntBASIC0.27□□□□□ -2.37
SRMP19623 MIR1-1-201ENST00000362147 71 ntBASIC0.26□□□□□ -2.37
SRMP19623 RNU6-522P-201ENST00000364497 107 ntBASIC0.26□□□□□ -2.37
SRMP19623 RNU6-281P-201ENST00000384212 103 ntBASIC0.26□□□□□ -2.37
SRMP19623 RNU6-95P-201ENST00000384697 107 ntBASIC0.26□□□□□ -2.37
SRMP19623 MIR140-201ENST00000385282 100 ntBASIC0.26□□□□□ -2.37
SRMP19623 MRPS18CP6-201ENST00000423587 223 ntBASIC0.26□□□□□ -2.37
SRMP19623 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.26□□□□□ -2.37
SRMP19623 AC002350.1-201ENST00000490759 375 ntBASIC0.26□□□□□ -2.37
SRMP19623 RN7SKP164-201ENST00000516138 266 ntBASIC0.26□□□□□ -2.37
SRMP19623 AC093027.1-201ENST00000546698 429 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms