Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.14□□□□□ -2.23
XRCC1P18887 AL512310.8-201ENST00000550183 120 ntBASIC1.14□□□□□ -2.23
XRCC1P18887 MIR8065-201ENST00000620577 100 ntBASIC1.14□□□□□ -2.23
XRCC1P18887 MIR6079-201ENST00000635807 62 ntBASIC1.14□□□□□ -2.23
XRCC1P18887 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.14□□□□□ -2.23
XRCC1P18887 SNORD114-7-201ENST00000362520 77 ntBASIC1.13□□□□□ -2.23
XRCC1P18887 SNORA27.1-201ENST00000362604 124 ntBASIC1.13□□□□□ -2.23
XRCC1P18887 MIR618-201ENST00000385287 98 ntBASIC1.13□□□□□ -2.23
XRCC1P18887 AL355796.1-201ENST00000406706 323 ntBASIC1.13□□□□□ -2.23
XRCC1P18887 Y_RNA.619-201ENST00000410951 90 ntBASIC1.13□□□□□ -2.23
XRCC1P18887 AC114482.1-201ENST00000418010 247 ntBASIC1.13□□□□□ -2.23
XRCC1P18887 RNA5SP20-201ENST00000515976 84 ntBASIC1.13□□□□□ -2.23
XRCC1P18887 MIR3664-201ENST00000579074 99 ntBASIC1.13□□□□□ -2.23
XRCC1P18887 MIR5690-201ENST00000583739 73 ntBASIC1.13□□□□□ -2.23
XRCC1P18887 AC080078.3-201ENST00000605407 463 ntBASIC1.13□□□□□ -2.23
XRCC1P18887 AL021879.1-201ENST00000611756 288 ntBASIC1.13□□□□□ -2.23
XRCC1P18887 AL357075.2-201ENST00000614906 189 ntBASIC1.13□□□□□ -2.23
XRCC1P18887 MIR3674-201ENST00000636576 68 ntBASIC1.13□□□□□ -2.23
XRCC1P18887 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
XRCC1P18887 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
XRCC1P18887 RNA5SP361-201ENST00000362686 118 ntBASIC1.12□□□□□ -2.23
XRCC1P18887 Y_RNA.577-201ENST00000384794 101 ntBASIC1.12□□□□□ -2.23
XRCC1P18887 MT-TL1-201ENST00000386347 75 ntBASIC1.12□□□□□ -2.23
XRCC1P18887 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
XRCC1P18887 RNU6-625P-201ENST00000459412 107 ntBASIC1.12□□□□□ -2.23
XRCC1P18887 SNORA40.9-201ENST00000515895 93 ntBASIC1.12□□□□□ -2.23
XRCC1P18887 RNU6-341P-201ENST00000516973 96 ntBASIC1.12□□□□□ -2.23
XRCC1P18887 RNU6-264P-201ENST00000517134 104 ntBASIC1.12□□□□□ -2.23
XRCC1P18887 CYP3A52P-201ENST00000563326 91 ntBASIC1.12□□□□□ -2.23
XRCC1P18887 AC025253.1-201ENST00000613623 543 ntBASIC1.12□□□□□ -2.23
XRCC1P18887 AC022306.2-201ENST00000617563 647 ntBASIC1.12□□□□□ -2.23
XRCC1P18887 SNORD3E-202ENST00000627253 216 ntBASIC1.12□□□□□ -2.23
XRCC1P18887 AL669831.3-213ENST00000636676 183 ntBASIC1.12□□□□□ -2.23
XRCC1P18887 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
XRCC1P18887 RNU6-318P-201ENST00000384283 103 ntBASIC1.11□□□□□ -2.23
XRCC1P18887 MIR625-201ENST00000385047 85 ntBASIC1.11□□□□□ -2.23
XRCC1P18887 MIR660-201ENST00000385235 97 ntBASIC1.11□□□□□ -2.23
XRCC1P18887 RNU6-876P-201ENST00000391295 104 ntBASIC1.11□□□□□ -2.23
XRCC1P18887 MIR873-201ENST00000401120 77 ntBASIC1.11□□□□□ -2.23
XRCC1P18887 MIR1276-201ENST00000408707 83 ntBASIC1.11□□□□□ -2.23
XRCC1P18887 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.11□□□□□ -2.23
XRCC1P18887 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.11□□□□□ -2.23
XRCC1P18887 AL591704.2-201ENST00000421658 181 ntBASIC1.11□□□□□ -2.23
XRCC1P18887 MTND1P2-201ENST00000430604 821 ntBASIC1.11□□□□□ -2.23
XRCC1P18887 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.11□□□□□ -2.23
XRCC1P18887 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.11□□□□□ -2.23
XRCC1P18887 U8.22-201ENST00000459141 133 ntBASIC1.11□□□□□ -2.23
XRCC1P18887 MIR2053-201ENST00000459295 91 ntBASIC1.11□□□□□ -2.23
XRCC1P18887 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.11□□□□□ -2.23
XRCC1P18887 RNU6-1278P-201ENST00000516130 107 ntBASIC1.11□□□□□ -2.23
XRCC1P18887 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.11□□□□□ -2.23
XRCC1P18887 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.11□□□□□ -2.23
XRCC1P18887 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.11□□□□□ -2.23
XRCC1P18887 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.11□□□□□ -2.23
XRCC1P18887 AL513534.2-201ENST00000603836 250 ntBASIC1.11□□□□□ -2.23
XRCC1P18887 AC005828.6-201ENST00000606610 232 ntBASIC1.11□□□□□ -2.23
XRCC1P18887 AC122108.2-201ENST00000611946 526 ntBASIC1.11□□□□□ -2.23
XRCC1P18887 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.11□□□□□ -2.23
XRCC1P18887 U6.115-201ENST00000636045 103 ntBASIC1.11□□□□□ -2.23
XRCC1P18887 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
XRCC1P18887 SNORA25.9-201ENST00000365087 128 ntBASIC1.1□□□□□ -2.23
XRCC1P18887 RNU6-407P-201ENST00000365280 104 ntBASIC1.1□□□□□ -2.23
XRCC1P18887 Y_RNA.599-201ENST00000410489 109 ntBASIC1.1□□□□□ -2.23
XRCC1P18887 AC018865.2-201ENST00000423631 129 ntBASIC1.1□□□□□ -2.23
XRCC1P18887 RAB28P5-201ENST00000427490 651 ntBASIC1.1□□□□□ -2.23
XRCC1P18887 STAG3L5P-204ENST00000443759 179 ntBASIC1.1□□□□□ -2.23
XRCC1P18887 RNU2-56P-201ENST00000516826 190 ntBASIC1.1□□□□□ -2.23
XRCC1P18887 RN7SKP88-201ENST00000516847 250 ntBASIC1.1□□□□□ -2.23
XRCC1P18887 AP002004.2-201ENST00000531656 154 ntBASIC1.1□□□□□ -2.23
XRCC1P18887 MIR4295-201ENST00000585286 85 ntBASIC1.1□□□□□ -2.23
XRCC1P18887 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.1□□□□□ -2.23
XRCC1P18887 7SK.8-201ENST00000612110 250 ntBASIC1.1□□□□□ -2.23
XRCC1P18887 7SK.11-201ENST00000615477 250 ntBASIC1.1□□□□□ -2.23
XRCC1P18887 7SK.13-201ENST00000622040 250 ntBASIC1.1□□□□□ -2.23
XRCC1P18887 TPTEP1-208ENST00000636884 213 ntBASIC1.1□□□□□ -2.23
XRCC1P18887 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
XRCC1P18887 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
XRCC1P18887 RNU4-76P-201ENST00000364509 141 ntBASIC1.09□□□□□ -2.23
XRCC1P18887 Y_RNA.265-201ENST00000364677 108 ntBASIC1.09□□□□□ -2.23
XRCC1P18887 RNU6-376P-201ENST00000384731 106 ntBASIC1.09□□□□□ -2.23
XRCC1P18887 SNORA69.1-201ENST00000390904 137 ntBASIC1.09□□□□□ -2.23
XRCC1P18887 SNORA75.6-201ENST00000391318 127 ntBASIC1.09□□□□□ -2.23
XRCC1P18887 SNORD12B-201ENST00000410433 91 ntBASIC1.09□□□□□ -2.23
XRCC1P18887 PDCL2P1-201ENST00000419302 352 ntBASIC1.09□□□□□ -2.23
XRCC1P18887 MTND4P28-201ENST00000426217 387 ntBASIC1.09□□□□□ -2.23
XRCC1P18887 AL137792.2-201ENST00000443484 235 ntBASIC1.09□□□□□ -2.23
XRCC1P18887 COX6CP14-201ENST00000469580 174 ntBASIC1.09□□□□□ -2.23
XRCC1P18887 AC087343.1-201ENST00000477341 475 ntBASIC1.09□□□□□ -2.23
XRCC1P18887 RNA5SP102-201ENST00000516865 106 ntBASIC1.09□□□□□ -2.23
XRCC1P18887 RNU7-4P-201ENST00000516961 62 ntBASIC1.09□□□□□ -2.23
XRCC1P18887 AL358944.1-201ENST00000528537 144 ntBASIC1.09□□□□□ -2.23
XRCC1P18887 MIR1244-1-201ENST00000612829 85 ntBASIC1.09□□□□□ -2.23
XRCC1P18887 MIR6504-201ENST00000613520 61 ntBASIC1.09□□□□□ -2.23
XRCC1P18887 AC127459.3-201ENST00000624328 466 ntBASIC1.09□□□□□ -2.23
XRCC1P18887 MIR1244-3-201ENST00000635744 85 ntBASIC1.09□□□□□ -2.23
XRCC1P18887 MIR1244-2-201ENST00000636449 85 ntBASIC1.09□□□□□ -2.23
XRCC1P18887 MIR1244-4-202ENST00000636813 85 ntBASIC1.09□□□□□ -2.23
XRCC1P18887 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.09□□□□□ -2.24
XRCC1P18887 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.08□□□□□ -2.24
XRCC1P18887 RNU6-1301P-201ENST00000362724 104 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 167.8 ms