Protein–RNA interactions for Protein: P16499

PDE6A, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6AP16499 AL513477.1-202ENST00000417061 214 ntBASIC2.91□□□□□ -1.94
PDE6AP16499 AC003685.2-201ENST00000422795 395 ntBASIC2.91□□□□□ -1.94
PDE6AP16499 AL121890.1-201ENST00000435457 205 ntBASIC2.91□□□□□ -1.94
PDE6AP16499 AC104389.3-201ENST00000445629 235 ntBASIC2.91□□□□□ -1.94
PDE6AP16499 RNU6-498P-201ENST00000459468 107 ntBASIC2.91□□□□□ -1.94
PDE6AP16499 RN7SL636P-201ENST00000497504 294 ntBASIC2.91□□□□□ -1.94
PDE6AP16499 AC010598.1-201ENST00000510378 103 ntBASIC2.91□□□□□ -1.94
PDE6AP16499 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.91□□□□□ -1.94
PDE6AP16499 AC046143.2-201ENST00000609789 160 ntBASIC2.91□□□□□ -1.94
PDE6AP16499 MTND1P7-201ENST00000632801 297 ntBASIC2.91□□□□□ -1.94
PDE6AP16499 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PDE6AP16499 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
PDE6AP16499 RNU6-271P-201ENST00000363858 105 ntBASIC2.9□□□□□ -1.95
PDE6AP16499 Y_RNA.310-201ENST00000365063 113 ntBASIC2.9□□□□□ -1.95
PDE6AP16499 SNORA72.4-201ENST00000384174 132 ntBASIC2.9□□□□□ -1.95
PDE6AP16499 MIR561-201ENST00000385216 97 ntBASIC2.9□□□□□ -1.95
PDE6AP16499 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
PDE6AP16499 RNU6-381P-201ENST00000391259 108 ntBASIC2.9□□□□□ -1.95
PDE6AP16499 RNA5SP492-201ENST00000411330 114 ntBASIC2.9□□□□□ -1.95
PDE6AP16499 AC008134.1-201ENST00000420943 193 ntBASIC2.9□□□□□ -1.95
PDE6AP16499 Z96811.1-201ENST00000445880 108 ntBASIC2.9□□□□□ -1.95
PDE6AP16499 RPL23AP7-203ENST00000449021 469 ntBASIC2.9□□□□□ -1.95
PDE6AP16499 AL137159.1-201ENST00000452808 512 ntBASIC2.9□□□□□ -1.95
PDE6AP16499 SNORD65B-201ENST00000459126 73 ntBASIC2.9□□□□□ -1.95
PDE6AP16499 RPS27AP9-201ENST00000477681 438 ntBASIC2.9□□□□□ -1.95
PDE6AP16499 AC025647.1-201ENST00000517879 253 ntBASIC2.9□□□□□ -1.95
PDE6AP16499 PRELID2P1-201ENST00000552837 301 ntBASIC2.9□□□□□ -1.95
PDE6AP16499 MIR3117-201ENST00000584034 78 ntBASIC2.9□□□□□ -1.95
PDE6AP16499 AP001485.1-201ENST00000604799 199 ntBASIC2.9□□□□□ -1.95
PDE6AP16499 AC013791.1-201ENST00000616619 62 ntBASIC2.9□□□□□ -1.95
PDE6AP16499 MIR1291-201ENST00000627649 87 ntBASIC2.9□□□□□ -1.95
PDE6AP16499 SNORA27.1-201ENST00000362604 124 ntBASIC2.89□□□□□ -1.95
PDE6AP16499 RNU6-743P-201ENST00000364151 106 ntBASIC2.89□□□□□ -1.95
PDE6AP16499 Y_RNA.412-201ENST00000384001 104 ntBASIC2.89□□□□□ -1.95
PDE6AP16499 RNU2-2P-201ENST00000410396 191 ntBASIC2.89□□□□□ -1.95
PDE6AP16499 RNU2-48P-201ENST00000410694 191 ntBASIC2.89□□□□□ -1.95
PDE6AP16499 AC093259.1-201ENST00000509755 300 ntBASIC2.89□□□□□ -1.95
PDE6AP16499 AC026436.1-201ENST00000510537 270 ntBASIC2.89□□□□□ -1.95
PDE6AP16499 AC021269.2-201ENST00000532318 330 ntBASIC2.89□□□□□ -1.95
PDE6AP16499 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.89□□□□□ -1.95
PDE6AP16499 RNU2-4P-201ENST00000606190 192 ntBASIC2.89□□□□□ -1.95
PDE6AP16499 U2.15-201ENST00000611544 191 ntBASIC2.89□□□□□ -1.95
PDE6AP16499 U2.16-201ENST00000613119 191 ntBASIC2.89□□□□□ -1.95
PDE6AP16499 U2.12-201ENST00000613778 191 ntBASIC2.89□□□□□ -1.95
PDE6AP16499 U2.9-201ENST00000615427 191 ntBASIC2.89□□□□□ -1.95
PDE6AP16499 U2.11-201ENST00000616345 191 ntBASIC2.89□□□□□ -1.95
PDE6AP16499 U2.2-201ENST00000616535 191 ntBASIC2.89□□□□□ -1.95
PDE6AP16499 U2.3-201ENST00000617785 191 ntBASIC2.89□□□□□ -1.95
PDE6AP16499 U2.19-201ENST00000618602 191 ntBASIC2.89□□□□□ -1.95
PDE6AP16499 RNU2-1-201ENST00000618664 191 ntBASIC2.89□□□□□ -1.95
PDE6AP16499 U2.6-201ENST00000619225 191 ntBASIC2.89□□□□□ -1.95
PDE6AP16499 U2.5-201ENST00000619465 191 ntBASIC2.89□□□□□ -1.95
PDE6AP16499 U2.10-201ENST00000620268 191 ntBASIC2.89□□□□□ -1.95
PDE6AP16499 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.88□□□□□ -1.95
PDE6AP16499 AC068700.1-201ENST00000565862 3754 ntBASIC2.88□□□□□ -1.95
PDE6AP16499 Y_RNA.124-201ENST00000363339 93 ntBASIC2.88□□□□□ -1.95
PDE6AP16499 RNU6-899P-201ENST00000363947 107 ntBASIC2.88□□□□□ -1.95
PDE6AP16499 RNU4-84P-201ENST00000364200 139 ntBASIC2.88□□□□□ -1.95
PDE6AP16499 RNU6-1130P-201ENST00000365434 107 ntBASIC2.88□□□□□ -1.95
PDE6AP16499 AL355497.1-201ENST00000406262 551 ntBASIC2.88□□□□□ -1.95
PDE6AP16499 AC123900.1-201ENST00000420390 96 ntBASIC2.88□□□□□ -1.95
PDE6AP16499 MTCO1P44-201ENST00000441935 243 ntBASIC2.88□□□□□ -1.95
PDE6AP16499 UBBP3-201ENST00000445497 241 ntBASIC2.88□□□□□ -1.95
PDE6AP16499 HSPE1P13-201ENST00000451143 297 ntBASIC2.88□□□□□ -1.95
PDE6AP16499 AC013412.1-201ENST00000610687 192 ntBASIC2.88□□□□□ -1.95
PDE6AP16499 AC006435.5-201ENST00000624486 112 ntBASIC2.88□□□□□ -1.95
PDE6AP16499 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
PDE6AP16499 Y_RNA.332-201ENST00000365271 113 ntBASIC2.87□□□□□ -1.95
PDE6AP16499 AL357134.1-201ENST00000445848 426 ntBASIC2.87□□□□□ -1.95
PDE6AP16499 AC010531.2-201ENST00000465012 153 ntBASIC2.87□□□□□ -1.95
PDE6AP16499 RPS26P55-201ENST00000471178 356 ntBASIC2.87□□□□□ -1.95
PDE6AP16499 AC008413.1-201ENST00000511864 177 ntBASIC2.87□□□□□ -1.95
PDE6AP16499 RNU7-121P-201ENST00000516604 62 ntBASIC2.87□□□□□ -1.95
PDE6AP16499 AC091544.4-201ENST00000555268 342 ntBASIC2.87□□□□□ -1.95
PDE6AP16499 MIR4435-1-201ENST00000582552 80 ntBASIC2.87□□□□□ -1.95
PDE6AP16499 AC067747.1-201ENST00000608026 250 ntBASIC2.87□□□□□ -1.95
PDE6AP16499 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
PDE6AP16499 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
PDE6AP16499 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
PDE6AP16499 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
PDE6AP16499 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.86□□□□□ -1.95
PDE6AP16499 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
PDE6AP16499 RNU6-1048P-201ENST00000364054 107 ntBASIC2.86□□□□□ -1.95
PDE6AP16499 RNU6-275P-201ENST00000364910 107 ntBASIC2.86□□□□□ -1.95
PDE6AP16499 RNU6-1240P-201ENST00000365155 104 ntBASIC2.86□□□□□ -1.95
PDE6AP16499 RNU6-449P-201ENST00000383914 107 ntBASIC2.86□□□□□ -1.95
PDE6AP16499 Y_RNA.400-201ENST00000383963 111 ntBASIC2.86□□□□□ -1.95
PDE6AP16499 MIR626-201ENST00000385032 94 ntBASIC2.86□□□□□ -1.95
PDE6AP16499 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
PDE6AP16499 RPS12P2-201ENST00000439728 269 ntBASIC2.86□□□□□ -1.95
PDE6AP16499 RNU7-141P-201ENST00000459304 62 ntBASIC2.86□□□□□ -1.95
PDE6AP16499 RN7SKP164-201ENST00000516138 266 ntBASIC2.86□□□□□ -1.95
PDE6AP16499 MIR5688-201ENST00000580619 83 ntBASIC2.86□□□□□ -1.95
PDE6AP16499 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.86□□□□□ -1.95
PDE6AP16499 AL590808.1-201ENST00000618696 141 ntBASIC2.86□□□□□ -1.95
PDE6AP16499 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.86□□□□□ -1.95
PDE6AP16499 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PDE6AP16499 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.85□□□□□ -1.95
PDE6AP16499 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.85□□□□□ -1.95
PDE6AP16499 AC134026.1-201ENST00000623249 2239 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms