Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NID1P14543 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
NID1P14543 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NID1P14543 MFSD8-236ENST00000641509 4050 ntBASIC3.31□□□□□ -1.88
NID1P14543 Y_RNA.298-201ENST00000364960 107 ntBASIC3.31□□□□□ -1.88
NID1P14543 RNVU1-14-201ENST00000384770 164 ntBASIC3.31□□□□□ -1.88
NID1P14543 MT-TI-201ENST00000387365 69 ntBASIC3.31□□□□□ -1.88
NID1P14543 RNU11-5P-201ENST00000391216 129 ntBASIC3.31□□□□□ -1.88
NID1P14543 ATP5A1P2-201ENST00000412323 255 ntBASIC3.31□□□□□ -1.88
NID1P14543 AL035423.1-201ENST00000420331 213 ntBASIC3.31□□□□□ -1.88
NID1P14543 AC233266.1-201ENST00000454518 96 ntBASIC3.31□□□□□ -1.88
NID1P14543 RNU2-27P-201ENST00000516185 142 ntBASIC3.31□□□□□ -1.88
NID1P14543 SUMO2P16-201ENST00000519475 264 ntBASIC3.31□□□□□ -1.88
NID1P14543 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
NID1P14543 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
NID1P14543 AC242852.1-201ENST00000612151 96 ntBASIC3.31□□□□□ -1.88
NID1P14543 AC244015.1-201ENST00000622301 99 ntBASIC3.31□□□□□ -1.88
NID1P14543 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.31□□□□□ -1.88
NID1P14543 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
NID1P14543 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NID1P14543 AC091152.2-201ENST00000591628 2569 ntBASIC3.31□□□□□ -1.88
NID1P14543 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
NID1P14543 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NID1P14543 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
NID1P14543 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NID1P14543 RNU6-349P-201ENST00000362402 107 ntBASIC3.3□□□□□ -1.88
NID1P14543 RNU4-36P-201ENST00000364294 144 ntBASIC3.3□□□□□ -1.88
NID1P14543 SNORA2.2-201ENST00000365473 135 ntBASIC3.3□□□□□ -1.88
NID1P14543 Y_RNA.410-201ENST00000383992 113 ntBASIC3.3□□□□□ -1.88
NID1P14543 MIR183-201ENST00000384958 110 ntBASIC3.3□□□□□ -1.88
NID1P14543 MIR218-2-201ENST00000385006 110 ntBASIC3.3□□□□□ -1.88
NID1P14543 MIR767-201ENST00000390228 109 ntBASIC3.3□□□□□ -1.88
NID1P14543 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
NID1P14543 U8.17-201ENST00000391292 132 ntBASIC3.3□□□□□ -1.88
NID1P14543 Z92545.1-201ENST00000411782 234 ntBASIC3.3□□□□□ -1.88
NID1P14543 AC025750.2-201ENST00000442609 450 ntBASIC3.3□□□□□ -1.88
NID1P14543 RPL39P25-201ENST00000449384 154 ntBASIC3.3□□□□□ -1.88
NID1P14543 RNU6-893P-201ENST00000458841 100 ntBASIC3.3□□□□□ -1.88
NID1P14543 RN7SL330P-201ENST00000469709 307 ntBASIC3.3□□□□□ -1.88
NID1P14543 Y_RNA.714-201ENST00000517065 90 ntBASIC3.3□□□□□ -1.88
NID1P14543 RNU6-586P-201ENST00000517265 104 ntBASIC3.3□□□□□ -1.88
NID1P14543 AC004486.1-201ENST00000546846 233 ntBASIC3.3□□□□□ -1.88
NID1P14543 U3.45-201ENST00000607547 219 ntBASIC3.3□□□□□ -1.88
NID1P14543 AP003355.3-201ENST00000623465 114 ntBASIC3.3□□□□□ -1.88
NID1P14543 AL162726.3-218ENST00000636401 95 ntBASIC3.3□□□□□ -1.88
NID1P14543 U6.105-201ENST00000637379 88 ntBASIC3.3□□□□□ -1.88
NID1P14543 AC073346.2-201ENST00000624724 2058 ntBASIC3.3□□□□□ -1.88
NID1P14543 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
NID1P14543 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NID1P14543 RNA5SP252-201ENST00000391131 119 ntBASIC3.29□□□□□ -1.88
NID1P14543 Y_RNA.593-201ENST00000410292 98 ntBASIC3.29□□□□□ -1.88
NID1P14543 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.29□□□□□ -1.88
NID1P14543 HMGN2P18-201ENST00000450680 270 ntBASIC3.29□□□□□ -1.88
NID1P14543 RN7SL594P-201ENST00000470590 287 ntBASIC3.29□□□□□ -1.88
NID1P14543 SCGB1D5P-201ENST00000515134 247 ntBASIC3.29□□□□□ -1.88
NID1P14543 SNORA4.4-201ENST00000515921 135 ntBASIC3.29□□□□□ -1.88
NID1P14543 RNU7-70P-201ENST00000516941 66 ntBASIC3.29□□□□□ -1.88
NID1P14543 RNA5SP490-201ENST00000517141 136 ntBASIC3.29□□□□□ -1.88
NID1P14543 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.29□□□□□ -1.88
NID1P14543 DEFB131E-201ENST00000532329 154 ntBASIC3.29□□□□□ -1.88
NID1P14543 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.29□□□□□ -1.88
NID1P14543 MIR5047-201ENST00000579212 100 ntBASIC3.29□□□□□ -1.88
NID1P14543 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.29□□□□□ -1.88
NID1P14543 MIR3163-201ENST00000581592 73 ntBASIC3.29□□□□□ -1.88
NID1P14543 RNVU1-4-201ENST00000612985 164 ntBASIC3.29□□□□□ -1.88
NID1P14543 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.29□□□□□ -1.88
NID1P14543 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
NID1P14543 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
NID1P14543 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NID1P14543 ZNF720P1-201ENST00000562403 1939 ntBASIC3.29□□□□□ -1.88
NID1P14543 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.28□□□□□ -1.88
NID1P14543 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
NID1P14543 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NID1P14543 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
NID1P14543 RNU6-228P-201ENST00000362700 106 ntBASIC3.28□□□□□ -1.88
NID1P14543 RNU6-1124P-201ENST00000384169 107 ntBASIC3.28□□□□□ -1.88
NID1P14543 ATP6V0E1P1-201ENST00000412537 226 ntBASIC3.28□□□□□ -1.88
NID1P14543 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.28□□□□□ -1.88
NID1P14543 CYCSP4-201ENST00000429682 331 ntBASIC3.28□□□□□ -1.88
NID1P14543 ARF4P2-201ENST00000430209 526 ntBASIC3.28□□□□□ -1.88
NID1P14543 RPS15AP28-201ENST00000435088 386 ntBASIC3.28□□□□□ -1.88
NID1P14543 AL445687.1-201ENST00000439946 251 ntBASIC3.28□□□□□ -1.88
NID1P14543 RNU7-164P-201ENST00000459221 62 ntBASIC3.28□□□□□ -1.88
NID1P14543 SNORA59A-201ENST00000459326 152 ntBASIC3.28□□□□□ -1.88
NID1P14543 AP001486.1-201ENST00000463339 476 ntBASIC3.28□□□□□ -1.88
NID1P14543 RN7SL293P-201ENST00000481765 281 ntBASIC3.28□□□□□ -1.88
NID1P14543 RNU6-1291P-201ENST00000516591 104 ntBASIC3.28□□□□□ -1.88
NID1P14543 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.28□□□□□ -1.88
NID1P14543 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.28□□□□□ -1.88
NID1P14543 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.28□□□□□ -1.88
NID1P14543 XIST_intron.1-201ENST00000619444 68 ntBASIC3.28□□□□□ -1.88
NID1P14543 MIR3202-2-201ENST00000635980 79 ntBASIC3.28□□□□□ -1.88
NID1P14543 ZNF271P-202ENST00000465539 1970 ntBASIC3.28□□□□□ -1.88
NID1P14543 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.28□□□□□ -1.88
NID1P14543 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.27□□□□□ -1.89
NID1P14543 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
NID1P14543 Y_RNA.17-201ENST00000362433 111 ntBASIC3.27□□□□□ -1.89
NID1P14543 RNY3P2-201ENST00000362918 102 ntBASIC3.27□□□□□ -1.89
NID1P14543 RNA5SP72-201ENST00000364442 117 ntBASIC3.27□□□□□ -1.89
NID1P14543 RNU6-1189P-201ENST00000383958 107 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 203.7 ms