Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HOXD8P13378 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
HOXD8P13378 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.45□□□□□ -1.86
HOXD8P13378 AC008555.8-201ENST00000623602 2168 ntBASIC3.45□□□□□ -1.86
HOXD8P13378 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HOXD8P13378 AC073325.2-201ENST00000339545 159 ntBASIC3.45□□□□□ -1.86
HOXD8P13378 Y_RNA.35-201ENST00000362601 101 ntBASIC3.45□□□□□ -1.86
HOXD8P13378 MIR218-1-201ENST00000384999 110 ntBASIC3.45□□□□□ -1.86
HOXD8P13378 SNORA4.4-201ENST00000515921 135 ntBASIC3.45□□□□□ -1.86
HOXD8P13378 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXD8P13378 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.45□□□□□ -1.86
HOXD8P13378 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.45□□□□□ -1.86
HOXD8P13378 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HOXD8P13378 SNORA71.1-201ENST00000364523 117 ntBASIC3.44□□□□□ -1.86
HOXD8P13378 Y_RNA.280-201ENST00000364765 112 ntBASIC3.44□□□□□ -1.86
HOXD8P13378 Y_RNA.346-201ENST00000365385 112 ntBASIC3.44□□□□□ -1.86
HOXD8P13378 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
HOXD8P13378 RNA5SP127-201ENST00000411051 133 ntBASIC3.44□□□□□ -1.86
HOXD8P13378 AC063976.4-201ENST00000421971 163 ntBASIC3.44□□□□□ -1.86
HOXD8P13378 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXD8P13378 MTATP6P21-201ENST00000440681 189 ntBASIC3.44□□□□□ -1.86
HOXD8P13378 AL161788.1-201ENST00000441805 169 ntBASIC3.44□□□□□ -1.86
HOXD8P13378 HMGN2P18-201ENST00000450680 270 ntBASIC3.44□□□□□ -1.86
HOXD8P13378 RPS26P45-201ENST00000471748 340 ntBASIC3.44□□□□□ -1.86
HOXD8P13378 RNU6-365P-201ENST00000517113 106 ntBASIC3.44□□□□□ -1.86
HOXD8P13378 NDUFB9P3-201ENST00000521269 501 ntBASIC3.44□□□□□ -1.86
HOXD8P13378 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.44□□□□□ -1.86
HOXD8P13378 UGP2-230ENST00000626380 276 ntTSL 5 BASIC3.44□□□□□ -1.86
HOXD8P13378 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HOXD8P13378 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.44□□□□□ -1.86
HOXD8P13378 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HOXD8P13378 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
HOXD8P13378 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HOXD8P13378 Y_RNA.796-201ENST00000364268 102 ntBASIC3.43□□□□□ -1.86
HOXD8P13378 RNU6-309P-201ENST00000364573 106 ntBASIC3.43□□□□□ -1.86
HOXD8P13378 Y_RNA.799-201ENST00000364992 102 ntBASIC3.43□□□□□ -1.86
HOXD8P13378 RNU6-880P-201ENST00000384526 107 ntBASIC3.43□□□□□ -1.86
HOXD8P13378 RPS12P18-201ENST00000442381 270 ntBASIC3.43□□□□□ -1.86
HOXD8P13378 AC025750.2-201ENST00000442609 450 ntBASIC3.43□□□□□ -1.86
HOXD8P13378 AC245102.2-201ENST00000448956 180 ntBASIC3.43□□□□□ -1.86
HOXD8P13378 Y_RNA.649-201ENST00000459077 103 ntBASIC3.43□□□□□ -1.86
HOXD8P13378 SNORD11-201ENST00000459124 84 ntBASIC3.43□□□□□ -1.86
HOXD8P13378 RNU6-168P-201ENST00000516189 101 ntBASIC3.43□□□□□ -1.86
HOXD8P13378 AL022345.2-201ENST00000606307 135 ntBASIC3.43□□□□□ -1.86
HOXD8P13378 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.43□□□□□ -1.86
HOXD8P13378 PWAR6-201ENST00000552334 4618 ntBASIC3.43□□□□□ -1.86
HOXD8P13378 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HOXD8P13378 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.43□□□□□ -1.86
HOXD8P13378 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.42□□□□□ -1.86
HOXD8P13378 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
HOXD8P13378 AL365361.1-201ENST00000566942 3481 ntBASIC3.42□□□□□ -1.86
HOXD8P13378 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HOXD8P13378 MIR22-201ENST00000362190 85 ntBASIC3.42□□□□□ -1.86
HOXD8P13378 Y_RNA.52-201ENST00000362760 96 ntBASIC3.42□□□□□ -1.86
HOXD8P13378 SNORA5B-201ENST00000363786 132 ntBASIC3.42□□□□□ -1.86
HOXD8P13378 RNU6-546P-201ENST00000383991 107 ntBASIC3.42□□□□□ -1.86
HOXD8P13378 MIR548A1-201ENST00000385041 97 ntBASIC3.42□□□□□ -1.86
HOXD8P13378 SNORA48.8-201ENST00000391324 134 ntBASIC3.42□□□□□ -1.86
HOXD8P13378 RNA5SP89-201ENST00000410300 108 ntBASIC3.42□□□□□ -1.86
HOXD8P13378 RNU2-32P-201ENST00000411193 191 ntBASIC3.42□□□□□ -1.86
HOXD8P13378 HMGN2P34-201ENST00000437647 269 ntBASIC3.42□□□□□ -1.86
HOXD8P13378 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.42□□□□□ -1.86
HOXD8P13378 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.42□□□□□ -1.86
HOXD8P13378 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.42□□□□□ -1.86
HOXD8P13378 RNU6-781P-201ENST00000516377 101 ntBASIC3.42□□□□□ -1.86
HOXD8P13378 RNU6-1096P-201ENST00000517089 102 ntBASIC3.42□□□□□ -1.86
HOXD8P13378 AC097639.2-201ENST00000603159 172 ntBASIC3.42□□□□□ -1.86
HOXD8P13378 AC025166.1-201ENST00000612411 163 ntBASIC3.42□□□□□ -1.86
HOXD8P13378 MIR7106-201ENST00000612419 65 ntBASIC3.42□□□□□ -1.86
HOXD8P13378 MIR1248-201ENST00000629190 106 ntBASIC3.42□□□□□ -1.86
HOXD8P13378 AC110079.1-202ENST00000635213 138 ntBASIC3.42□□□□□ -1.86
HOXD8P13378 AC091564.4-201ENST00000533934 2194 ntBASIC3.42□□□□□ -1.86
HOXD8P13378 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HOXD8P13378 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
HOXD8P13378 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HOXD8P13378 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HOXD8P13378 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HOXD8P13378 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
HOXD8P13378 SNORD67-201ENST00000390833 111 ntBASIC3.41□□□□□ -1.86
HOXD8P13378 AC063976.3-201ENST00000426849 329 ntBASIC3.41□□□□□ -1.86
HOXD8P13378 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.41□□□□□ -1.86
HOXD8P13378 Y_RNA.651-201ENST00000459380 103 ntBASIC3.41□□□□□ -1.86
HOXD8P13378 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.41□□□□□ -1.86
HOXD8P13378 AC018630.3-201ENST00000542637 96 ntBASIC3.41□□□□□ -1.86
HOXD8P13378 MIR3199-1-201ENST00000582434 88 ntBASIC3.41□□□□□ -1.86
HOXD8P13378 AC091178.2-201ENST00000584401 117 ntBASIC3.41□□□□□ -1.86
HOXD8P13378 AC004832.5-201ENST00000608677 401 ntBASIC3.41□□□□□ -1.86
HOXD8P13378 AL591926.4-201ENST00000616895 298 ntBASIC3.41□□□□□ -1.86
HOXD8P13378 AL137790.1-201ENST00000634283 177 ntBASIC3.41□□□□□ -1.86
HOXD8P13378 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HOXD8P13378 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
HOXD8P13378 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
HOXD8P13378 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.41□□□□□ -1.86
HOXD8P13378 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
HOXD8P13378 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HOXD8P13378 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.4□□□□□ -1.86
HOXD8P13378 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
HOXD8P13378 RNU6-508P-201ENST00000363231 103 ntBASIC3.4□□□□□ -1.87
HOXD8P13378 SNORA14A-201ENST00000364773 135 ntBASIC3.4□□□□□ -1.87
HOXD8P13378 RNU6-1186P-201ENST00000410429 97 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms