Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AC006600.1-201ENST00000572529 153 ntBASIC0.77□□□□□ -2.29
COL11A1P12107 AL355375.2-201ENST00000574825 175 ntBASIC0.77□□□□□ -2.29
COL11A1P12107 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
COL11A1P12107 AL117336.2-201ENST00000602435 335 ntBASIC0.77□□□□□ -2.29
COL11A1P12107 AC090971.5-201ENST00000621102 293 ntBASIC0.77□□□□□ -2.29
COL11A1P12107 RNU6-727P-201ENST00000363592 107 ntBASIC0.76□□□□□ -2.29
COL11A1P12107 RNU6-271P-201ENST00000363858 105 ntBASIC0.76□□□□□ -2.29
COL11A1P12107 Y_RNA.187-201ENST00000363918 113 ntBASIC0.76□□□□□ -2.29
COL11A1P12107 RNU6-968P-201ENST00000384076 107 ntBASIC0.76□□□□□ -2.29
COL11A1P12107 RNU6-767P-201ENST00000384132 107 ntBASIC0.76□□□□□ -2.29
COL11A1P12107 Y_RNA.474-201ENST00000384341 102 ntBASIC0.76□□□□□ -2.29
COL11A1P12107 Y_RNA.529-201ENST00000384586 119 ntBASIC0.76□□□□□ -2.29
COL11A1P12107 ELOCP21-201ENST00000412558 336 ntBASIC0.76□□□□□ -2.29
COL11A1P12107 EIF1P2-201ENST00000428233 350 ntBASIC0.76□□□□□ -2.29
COL11A1P12107 AC236972.2-201ENST00000434979 310 ntBASIC0.76□□□□□ -2.29
COL11A1P12107 MTND4P18-201ENST00000447010 465 ntBASIC0.76□□□□□ -2.29
COL11A1P12107 RNU7-57P-201ENST00000459540 60 ntBASIC0.76□□□□□ -2.29
COL11A1P12107 RNU6-221P-201ENST00000459541 99 ntBASIC0.76□□□□□ -2.29
COL11A1P12107 HMGN2P9-201ENST00000476875 229 ntBASIC0.76□□□□□ -2.29
COL11A1P12107 RNU6-559P-201ENST00000516151 98 ntBASIC0.76□□□□□ -2.29
COL11A1P12107 RNU11-2P-201ENST00000516898 142 ntBASIC0.76□□□□□ -2.29
COL11A1P12107 RNU6-58P-201ENST00000517143 103 ntBASIC0.76□□□□□ -2.29
COL11A1P12107 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.76□□□□□ -2.29
COL11A1P12107 RAB11AP2-201ENST00000545905 639 ntBASIC0.76□□□□□ -2.29
COL11A1P12107 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.76□□□□□ -2.29
COL11A1P12107 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.76□□□□□ -2.29
COL11A1P12107 MIR4753-201ENST00000585119 83 ntBASIC0.76□□□□□ -2.29
COL11A1P12107 MIR8065-201ENST00000620577 100 ntBASIC0.76□□□□□ -2.29
COL11A1P12107 Y_RNA.67-201ENST00000362870 100 ntBASIC0.75□□□□□ -2.29
COL11A1P12107 Y_RNA.160-201ENST00000363677 92 ntBASIC0.75□□□□□ -2.29
COL11A1P12107 SNORA72.2-201ENST00000365028 127 ntBASIC0.75□□□□□ -2.29
COL11A1P12107 Y_RNA.358-201ENST00000365491 99 ntBASIC0.75□□□□□ -2.29
COL11A1P12107 VTRNA1-3-201ENST00000365645 89 ntBASIC0.75□□□□□ -2.29
COL11A1P12107 RNU6-939P-201ENST00000384634 107 ntBASIC0.75□□□□□ -2.29
COL11A1P12107 MIR487A-201ENST00000385009 80 ntBASIC0.75□□□□□ -2.29
COL11A1P12107 MIR1185-2-201ENST00000408687 86 ntBASIC0.75□□□□□ -2.29
COL11A1P12107 AF228730.4-201ENST00000421457 183 ntBASIC0.75□□□□□ -2.29
COL11A1P12107 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.75□□□□□ -2.29
COL11A1P12107 MTND5P15-201ENST00000434246 349 ntBASIC0.75□□□□□ -2.29
COL11A1P12107 AL135790.2-201ENST00000437701 267 ntBASIC0.75□□□□□ -2.29
COL11A1P12107 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.75□□□□□ -2.29
COL11A1P12107 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.75□□□□□ -2.29
COL11A1P12107 SNORD65B-201ENST00000459126 73 ntBASIC0.75□□□□□ -2.29
COL11A1P12107 RNU7-94P-201ENST00000459576 63 ntBASIC0.75□□□□□ -2.29
COL11A1P12107 MTND4P17-201ENST00000470444 350 ntBASIC0.75□□□□□ -2.29
COL11A1P12107 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.75□□□□□ -2.29
COL11A1P12107 RNU6-507P-201ENST00000516045 100 ntBASIC0.75□□□□□ -2.29
COL11A1P12107 RNU6-948P-201ENST00000516374 107 ntBASIC0.75□□□□□ -2.29
COL11A1P12107 Y_RNA.708-201ENST00000516950 96 ntBASIC0.75□□□□□ -2.29
COL11A1P12107 AC091144.1-201ENST00000519573 138 ntBASIC0.75□□□□□ -2.29
COL11A1P12107 AC093023.1-201ENST00000547375 507 ntBASIC0.75□□□□□ -2.29
COL11A1P12107 AC004584.2-201ENST00000570407 410 ntBASIC0.75□□□□□ -2.29
COL11A1P12107 SNORD11B-201ENST00000607707 90 ntBASIC0.75□□□□□ -2.29
COL11A1P12107 AL353149.1-201ENST00000610667 244 ntBASIC0.75□□□□□ -2.29
COL11A1P12107 snoZ196.1-201ENST00000625269 89 ntBASIC0.75□□□□□ -2.29
COL11A1P12107 AC112487.2-201ENST00000637950 304 ntBASIC0.75□□□□□ -2.29
COL11A1P12107 MIR26B-201ENST00000362251 77 ntBASIC0.75□□□□□ -2.29
COL11A1P12107 RNU6-1301P-201ENST00000362724 104 ntBASIC0.75□□□□□ -2.29
COL11A1P12107 RNU4-79P-201ENST00000362764 141 ntBASIC0.75□□□□□ -2.29
COL11A1P12107 snoU2-30.2-201ENST00000362805 70 ntBASIC0.75□□□□□ -2.29
COL11A1P12107 Y_RNA.319-201ENST00000365138 92 ntBASIC0.75□□□□□ -2.29
COL11A1P12107 RNU6-1240P-201ENST00000365155 104 ntBASIC0.75□□□□□ -2.29
COL11A1P12107 RNU6-1283P-201ENST00000365314 105 ntBASIC0.75□□□□□ -2.29
COL11A1P12107 RNY3P4-201ENST00000384428 101 ntBASIC0.75□□□□□ -2.29
COL11A1P12107 RNU6-1026P-201ENST00000384465 108 ntBASIC0.75□□□□□ -2.29
COL11A1P12107 MRPL35P1-201ENST00000404272 572 ntBASIC0.75□□□□□ -2.29
COL11A1P12107 RNA5SP193-201ENST00000410353 107 ntBASIC0.75□□□□□ -2.29
COL11A1P12107 RNA5SP475-201ENST00000410568 110 ntBASIC0.75□□□□□ -2.29
COL11A1P12107 MTCO1P44-201ENST00000441935 243 ntBASIC0.75□□□□□ -2.29
COL11A1P12107 SNRPEP8-201ENST00000442866 260 ntBASIC0.75□□□□□ -2.29
COL11A1P12107 RNU1-131P-201ENST00000458943 161 ntBASIC0.75□□□□□ -2.29
COL11A1P12107 MIR2053-201ENST00000459295 91 ntBASIC0.75□□□□□ -2.29
COL11A1P12107 AL163195.1-201ENST00000496941 348 ntBASIC0.75□□□□□ -2.29
COL11A1P12107 AC011406.1-201ENST00000512440 370 ntBASIC0.75□□□□□ -2.29
COL11A1P12107 SNORD116-28-201ENST00000516123 91 ntBASIC0.75□□□□□ -2.29
COL11A1P12107 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.75□□□□□ -2.29
COL11A1P12107 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.75□□□□□ -2.29
COL11A1P12107 MIR5094-201ENST00000578766 85 ntBASIC0.75□□□□□ -2.29
COL11A1P12107 AC091178.2-201ENST00000584401 117 ntBASIC0.75□□□□□ -2.29
COL11A1P12107 AC006380.1-201ENST00000603598 186 ntBASIC0.75□□□□□ -2.29
COL11A1P12107 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.75□□□□□ -2.29
COL11A1P12107 AC087588.2-201ENST00000617667 426 ntBASIC0.75□□□□□ -2.29
COL11A1P12107 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.75□□□□□ -2.29
COL11A1P12107 AL359697.1-201ENST00000624879 587 ntBASIC0.75□□□□□ -2.29
COL11A1P12107 RNU6-1164P-201ENST00000364428 107 ntBASIC0.74□□□□□ -2.29
COL11A1P12107 Y_RNA.259-201ENST00000364619 101 ntBASIC0.74□□□□□ -2.29
COL11A1P12107 RNU4-9P-201ENST00000364951 139 ntBASIC0.74□□□□□ -2.29
COL11A1P12107 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
COL11A1P12107 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
COL11A1P12107 USP9YP16-201ENST00000430287 407 ntBASIC0.74□□□□□ -2.29
COL11A1P12107 AL353997.1-201ENST00000432936 108 ntBASIC0.74□□□□□ -2.29
COL11A1P12107 USP9YP23-201ENST00000455085 407 ntBASIC0.74□□□□□ -2.29
COL11A1P12107 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.74□□□□□ -2.29
COL11A1P12107 snoU13.6-201ENST00000458785 104 ntBASIC0.74□□□□□ -2.29
COL11A1P12107 MTND3P22-201ENST00000510932 243 ntBASIC0.74□□□□□ -2.29
COL11A1P12107 SNORA20.3-201ENST00000516880 132 ntBASIC0.74□□□□□ -2.29
COL11A1P12107 RNU6-264P-201ENST00000517134 104 ntBASIC0.74□□□□□ -2.29
COL11A1P12107 AC022616.4-201ENST00000522985 181 ntBASIC0.74□□□□□ -2.29
COL11A1P12107 DEFB131C-201ENST00000528817 165 ntBASIC0.74□□□□□ -2.29
COL11A1P12107 AC009229.3-201ENST00000608056 282 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms