Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 MIR1283-1-201ENST00000408494 87 ntBASIC4.02□□□□□ -1.77
CSB-PGBD3P0DP91 TRBV25OR9-2-201ENST00000438417 374 ntBASIC4.02□□□□□ -1.77
CSB-PGBD3P0DP91 RPL23AP7-203ENST00000449021 469 ntBASIC4.02□□□□□ -1.77
CSB-PGBD3P0DP91 AC080013.2-201ENST00000460866 323 ntBASIC4.02□□□□□ -1.77
CSB-PGBD3P0DP91 RNU6-781P-201ENST00000516377 101 ntBASIC4.02□□□□□ -1.77
CSB-PGBD3P0DP91 RNU6-197P-201ENST00000516680 100 ntBASIC4.02□□□□□ -1.77
CSB-PGBD3P0DP91 RNU2-60P-201ENST00000517290 128 ntBASIC4.02□□□□□ -1.77
CSB-PGBD3P0DP91 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CSB-PGBD3P0DP91 RNU6-484P-201ENST00000384016 107 ntBASIC4.01□□□□□ -1.77
CSB-PGBD3P0DP91 FO393413.1-201ENST00000402892 195 ntBASIC4.01□□□□□ -1.77
CSB-PGBD3P0DP91 AC002075.2-201ENST00000425207 252 ntBASIC4.01□□□□□ -1.77
CSB-PGBD3P0DP91 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC4.01□□□□□ -1.77
CSB-PGBD3P0DP91 CKS1BP2-201ENST00000497342 240 ntBASIC4.01□□□□□ -1.77
CSB-PGBD3P0DP91 AC109329.2-201ENST00000519658 482 ntBASIC4.01□□□□□ -1.77
CSB-PGBD3P0DP91 MIR3945-201ENST00000581853 98 ntBASIC4.01□□□□□ -1.77
CSB-PGBD3P0DP91 MIR4753-201ENST00000585119 83 ntBASIC4.01□□□□□ -1.77
CSB-PGBD3P0DP91 POLR3GP1-201ENST00000594073 261 ntBASIC4.01□□□□□ -1.77
CSB-PGBD3P0DP91 AC004832.5-201ENST00000608677 401 ntBASIC4.01□□□□□ -1.77
CSB-PGBD3P0DP91 UGP2-230ENST00000626380 276 ntTSL 5 BASIC4.01□□□□□ -1.77
CSB-PGBD3P0DP91 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CSB-PGBD3P0DP91 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
CSB-PGBD3P0DP91 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
CSB-PGBD3P0DP91 RNU4-82P-201ENST00000362443 140 ntBASIC4□□□□□ -1.77
CSB-PGBD3P0DP91 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC4□□□□□ -1.77
CSB-PGBD3P0DP91 MIR1185-2-201ENST00000408687 86 ntBASIC4□□□□□ -1.77
CSB-PGBD3P0DP91 Y_RNA.617-201ENST00000410920 90 ntBASIC4□□□□□ -1.77
CSB-PGBD3P0DP91 RN7SKP101-201ENST00000411376 320 ntBASIC4□□□□□ -1.77
CSB-PGBD3P0DP91 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC4□□□□□ -1.77
CSB-PGBD3P0DP91 RNU6-965P-201ENST00000516721 96 ntBASIC4□□□□□ -1.77
CSB-PGBD3P0DP91 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
CSB-PGBD3P0DP91 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
CSB-PGBD3P0DP91 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC4□□□□□ -1.77
CSB-PGBD3P0DP91 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
CSB-PGBD3P0DP91 AC062016.1-201ENST00000355719 319 ntBASIC3.99□□□□□ -1.77
CSB-PGBD3P0DP91 MIR30E-201ENST00000362104 92 ntBASIC3.99□□□□□ -1.77
CSB-PGBD3P0DP91 Y_RNA.369-201ENST00000365568 117 ntBASIC3.99□□□□□ -1.77
CSB-PGBD3P0DP91 RNU6-32P-201ENST00000383948 107 ntBASIC3.99□□□□□ -1.77
CSB-PGBD3P0DP91 RNU6-13P-201ENST00000384248 107 ntBASIC3.99□□□□□ -1.77
CSB-PGBD3P0DP91 RNU6-12P-201ENST00000384604 107 ntBASIC3.99□□□□□ -1.77
CSB-PGBD3P0DP91 RNU6-41P-201ENST00000384741 107 ntBASIC3.99□□□□□ -1.77
CSB-PGBD3P0DP91 MIR548A1-201ENST00000385041 97 ntBASIC3.99□□□□□ -1.77
CSB-PGBD3P0DP91 AL121890.1-201ENST00000435457 205 ntBASIC3.99□□□□□ -1.77
CSB-PGBD3P0DP91 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.99□□□□□ -1.77
CSB-PGBD3P0DP91 RPS26P45-201ENST00000471748 340 ntBASIC3.99□□□□□ -1.77
CSB-PGBD3P0DP91 ATP5EP1-201ENST00000510257 156 ntBASIC3.99□□□□□ -1.77
CSB-PGBD3P0DP91 RNU6-1231P-201ENST00000517185 103 ntBASIC3.99□□□□□ -1.77
CSB-PGBD3P0DP91 AL021707.8-201ENST00000609428 183 ntBASIC3.99□□□□□ -1.77
CSB-PGBD3P0DP91 uc_338.28-201ENST00000612082 187 ntBASIC3.99□□□□□ -1.77
CSB-PGBD3P0DP91 AL121890.5-201ENST00000620848 304 ntBASIC3.99□□□□□ -1.77
CSB-PGBD3P0DP91 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CSB-PGBD3P0DP91 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.99□□□□□ -1.77
CSB-PGBD3P0DP91 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.99□□□□□ -1.77
CSB-PGBD3P0DP91 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CSB-PGBD3P0DP91 RNU6-1323P-201ENST00000384025 107 ntBASIC3.98□□□□□ -1.77
CSB-PGBD3P0DP91 MIR873-201ENST00000401120 77 ntBASIC3.98□□□□□ -1.77
CSB-PGBD3P0DP91 AL139095.1-201ENST00000404326 391 ntBASIC3.98□□□□□ -1.77
CSB-PGBD3P0DP91 RNY4P30-201ENST00000410216 95 ntBASIC3.98□□□□□ -1.77
CSB-PGBD3P0DP91 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.98□□□□□ -1.77
CSB-PGBD3P0DP91 AL161788.1-201ENST00000441805 169 ntBASIC3.98□□□□□ -1.77
CSB-PGBD3P0DP91 CYP2C59P-201ENST00000457790 269 ntBASIC3.98□□□□□ -1.77
CSB-PGBD3P0DP91 RNU6-437P-201ENST00000459408 95 ntBASIC3.98□□□□□ -1.77
CSB-PGBD3P0DP91 RPL23AP54-201ENST00000495129 419 ntBASIC3.98□□□□□ -1.77
CSB-PGBD3P0DP91 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.98□□□□□ -1.77
CSB-PGBD3P0DP91 MIR4435-1-201ENST00000582552 80 ntBASIC3.98□□□□□ -1.77
CSB-PGBD3P0DP91 AC104984.5-201ENST00000586878 94 ntBASIC3.98□□□□□ -1.77
CSB-PGBD3P0DP91 MIR6715A-201ENST00000615929 79 ntBASIC3.98□□□□□ -1.77
CSB-PGBD3P0DP91 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CSB-PGBD3P0DP91 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.98□□□□□ -1.77
CSB-PGBD3P0DP91 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.98□□□□□ -1.77
CSB-PGBD3P0DP91 RNU6-309P-201ENST00000364573 106 ntBASIC3.97□□□□□ -1.77
CSB-PGBD3P0DP91 SNORD31B-201ENST00000364977 69 ntBASIC3.97□□□□□ -1.77
CSB-PGBD3P0DP91 DYNLT3P1-201ENST00000378574 347 ntBASIC3.97□□□□□ -1.77
CSB-PGBD3P0DP91 RNU6-546P-201ENST00000383991 107 ntBASIC3.97□□□□□ -1.77
CSB-PGBD3P0DP91 Y_RNA.432-201ENST00000384087 111 ntBASIC3.97□□□□□ -1.77
CSB-PGBD3P0DP91 AC087499.2-201ENST00000432861 149 ntBASIC3.97□□□□□ -1.77
CSB-PGBD3P0DP91 AL109933.2-201ENST00000452651 260 ntBASIC3.97□□□□□ -1.77
CSB-PGBD3P0DP91 AC021205.2-201ENST00000480069 347 ntBASIC3.97□□□□□ -1.77
CSB-PGBD3P0DP91 Y_RNA.690-201ENST00000516603 95 ntBASIC3.97□□□□□ -1.77
CSB-PGBD3P0DP91 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.97□□□□□ -1.77
CSB-PGBD3P0DP91 AC131055.1-201ENST00000584626 316 ntBASIC3.97□□□□□ -1.77
CSB-PGBD3P0DP91 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.97□□□□□ -1.77
CSB-PGBD3P0DP91 SNORD114-7-201ENST00000362520 77 ntBASIC3.96□□□□□ -1.78
CSB-PGBD3P0DP91 Y_RNA.116-201ENST00000363292 103 ntBASIC3.96□□□□□ -1.78
CSB-PGBD3P0DP91 RNU4-41P-201ENST00000364426 143 ntBASIC3.96□□□□□ -1.78
CSB-PGBD3P0DP91 RNU2-32P-201ENST00000411193 191 ntBASIC3.96□□□□□ -1.78
CSB-PGBD3P0DP91 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
CSB-PGBD3P0DP91 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.96□□□□□ -1.78
CSB-PGBD3P0DP91 AL031737.1-201ENST00000450125 223 ntBASIC3.96□□□□□ -1.78
CSB-PGBD3P0DP91 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.96□□□□□ -1.78
CSB-PGBD3P0DP91 RNU7-57P-201ENST00000459540 60 ntBASIC3.96□□□□□ -1.78
CSB-PGBD3P0DP91 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.96□□□□□ -1.78
CSB-PGBD3P0DP91 Y_RNA.677-201ENST00000516401 85 ntBASIC3.96□□□□□ -1.78
CSB-PGBD3P0DP91 AC091178.2-201ENST00000584401 117 ntBASIC3.96□□□□□ -1.78
CSB-PGBD3P0DP91 AL049861.1-201ENST00000603130 150 ntBASIC3.96□□□□□ -1.78
CSB-PGBD3P0DP91 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.96□□□□□ -1.78
CSB-PGBD3P0DP91 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
CSB-PGBD3P0DP91 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CSB-PGBD3P0DP91 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
CSB-PGBD3P0DP91 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
CSB-PGBD3P0DP91 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms