Protein–RNA interactions for Protein: P07197

NEFM, Neurofilament medium polypeptide, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP07197 RNU6-215P-201ENST00000365169 102 ntBASIC3.51□□□□□ -1.85
NEFMP07197 Y_RNA.572-201ENST00000384757 98 ntBASIC3.51□□□□□ -1.85
NEFMP07197 MIR15B-201ENST00000385045 98 ntBASIC3.51□□□□□ -1.85
NEFMP07197 SNORD37.2-201ENST00000391075 66 ntBASIC3.51□□□□□ -1.85
NEFMP07197 SUMO1P4-201ENST00000429430 302 ntBASIC3.51□□□□□ -1.85
NEFMP07197 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.51□□□□□ -1.85
NEFMP07197 AL109933.2-201ENST00000452651 260 ntBASIC3.51□□□□□ -1.85
NEFMP07197 RPL36AP48-201ENST00000485521 314 ntBASIC3.51□□□□□ -1.85
NEFMP07197 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.51□□□□□ -1.85
NEFMP07197 MIR3646-201ENST00000578301 84 ntBASIC3.51□□□□□ -1.85
NEFMP07197 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.51□□□□□ -1.85
NEFMP07197 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.51□□□□□ -1.85
NEFMP07197 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
NEFMP07197 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NEFMP07197 Y_RNA.218-201ENST00000364218 104 ntBASIC3.5□□□□□ -1.85
NEFMP07197 Y_RNA.229-201ENST00000364347 113 ntBASIC3.5□□□□□ -1.85
NEFMP07197 RNU6-1305P-201ENST00000364353 104 ntBASIC3.5□□□□□ -1.85
NEFMP07197 RNU6-728P-201ENST00000365375 104 ntBASIC3.5□□□□□ -1.85
NEFMP07197 Y_RNA.420-201ENST00000384043 110 ntBASIC3.5□□□□□ -1.85
NEFMP07197 SNORD20-201ENST00000384550 80 ntBASIC3.5□□□□□ -1.85
NEFMP07197 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.5□□□□□ -1.85
NEFMP07197 MIR3162-201ENST00000581818 82 ntBASIC3.5□□□□□ -1.85
NEFMP07197 AL670379.2-201ENST00000604983 252 ntBASIC3.5□□□□□ -1.85
NEFMP07197 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.49□□□□□ -1.85
NEFMP07197 AL136360.1-201ENST00000503377 1900 ntBASIC3.49□□□□□ -1.85
NEFMP07197 RNA5SP354-201ENST00000391247 136 ntBASIC3.49□□□□□ -1.85
NEFMP07197 AC114982.1-201ENST00000469402 321 ntBASIC3.49□□□□□ -1.85
NEFMP07197 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.49□□□□□ -1.85
NEFMP07197 MIR4513-201ENST00000581077 86 ntBASIC3.49□□□□□ -1.85
NEFMP07197 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NEFMP07197 AL159152.1-201ENST00000635019 2587 ntBASIC3.49□□□□□ -1.85
NEFMP07197 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.48□□□□□ -1.85
NEFMP07197 SNORA20-201ENST00000384662 132 ntBASIC3.48□□□□□ -1.85
NEFMP07197 AL606845.1-201ENST00000404881 255 ntBASIC3.48□□□□□ -1.85
NEFMP07197 MIR1185-2-201ENST00000408687 86 ntBASIC3.48□□□□□ -1.85
NEFMP07197 HSPE1P21-201ENST00000438283 308 ntBASIC3.48□□□□□ -1.85
NEFMP07197 RNU6-1211P-201ENST00000459179 105 ntBASIC3.48□□□□□ -1.85
NEFMP07197 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.48□□□□□ -1.85
NEFMP07197 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.48□□□□□ -1.85
NEFMP07197 MIR548AY-201ENST00000617669 107 ntBASIC3.48□□□□□ -1.85
NEFMP07197 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
NEFMP07197 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
NEFMP07197 SNORD32B-201ENST00000364460 84 ntBASIC3.47□□□□□ -1.85
NEFMP07197 RNU6-407P-201ENST00000365280 104 ntBASIC3.47□□□□□ -1.85
NEFMP07197 RNY3P5-201ENST00000384127 102 ntBASIC3.47□□□□□ -1.85
NEFMP07197 RNU6-80P-201ENST00000384195 107 ntBASIC3.47□□□□□ -1.85
NEFMP07197 MIR29B2-201ENST00000385055 81 ntBASIC3.47□□□□□ -1.85
NEFMP07197 SNORA12-201ENST00000391162 147 ntBASIC3.47□□□□□ -1.85
NEFMP07197 MIR873-201ENST00000401120 77 ntBASIC3.47□□□□□ -1.85
NEFMP07197 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
NEFMP07197 HSPE1P13-201ENST00000451143 297 ntBASIC3.47□□□□□ -1.85
NEFMP07197 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.47□□□□□ -1.85
NEFMP07197 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.47□□□□□ -1.85
NEFMP07197 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.47□□□□□ -1.85
NEFMP07197 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NEFMP07197 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
NEFMP07197 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
NEFMP07197 RNU1-105P-201ENST00000363470 161 ntBASIC3.46□□□□□ -1.86
NEFMP07197 Y_RNA.542-201ENST00000384641 111 ntBASIC3.46□□□□□ -1.86
NEFMP07197 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
NEFMP07197 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.46□□□□□ -1.86
NEFMP07197 RPL23AP7-203ENST00000449021 469 ntBASIC3.46□□□□□ -1.86
NEFMP07197 RNU7-197P-201ENST00000458836 62 ntBASIC3.46□□□□□ -1.86
NEFMP07197 HMGN2P9-201ENST00000476875 229 ntBASIC3.46□□□□□ -1.86
NEFMP07197 RNA5SP282-201ENST00000516355 108 ntBASIC3.46□□□□□ -1.86
NEFMP07197 RNU5F-4P-201ENST00000516581 114 ntBASIC3.46□□□□□ -1.86
NEFMP07197 RNU6-919P-201ENST00000516731 104 ntBASIC3.46□□□□□ -1.86
NEFMP07197 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NEFMP07197 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NEFMP07197 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.46□□□□□ -1.86
NEFMP07197 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
NEFMP07197 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
NEFMP07197 RNU6-834P-201ENST00000362367 110 ntBASIC3.45□□□□□ -1.86
NEFMP07197 RNU6-271P-201ENST00000363858 105 ntBASIC3.45□□□□□ -1.86
NEFMP07197 DEFA7P-201ENST00000382676 285 ntBASIC3.45□□□□□ -1.86
NEFMP07197 MT-TT-201ENST00000387460 66 ntBASIC3.45□□□□□ -1.86
NEFMP07197 MIR300-201ENST00000401138 83 ntBASIC3.45□□□□□ -1.86
NEFMP07197 RNU4-43P-201ENST00000410628 137 ntBASIC3.45□□□□□ -1.86
NEFMP07197 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.45□□□□□ -1.86
NEFMP07197 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.45□□□□□ -1.86
NEFMP07197 RPS27P1-201ENST00000450552 247 ntBASIC3.45□□□□□ -1.86
NEFMP07197 AC108938.1-201ENST00000451204 136 ntBASIC3.45□□□□□ -1.86
NEFMP07197 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.45□□□□□ -1.86
NEFMP07197 RNU7-115P-201ENST00000516433 55 ntBASIC3.45□□□□□ -1.86
NEFMP07197 FO624990.1-201ENST00000636373 85 ntBASIC3.45□□□□□ -1.86
NEFMP07197 MIR6844-201ENST00000637122 62 ntBASIC3.45□□□□□ -1.86
NEFMP07197 AC068647.2-201ENST00000637380 353 ntBASIC3.45□□□□□ -1.86
NEFMP07197 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
NEFMP07197 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.45□□□□□ -1.86
NEFMP07197 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.44□□□□□ -1.86
NEFMP07197 U8.7-201ENST00000364940 136 ntBASIC3.44□□□□□ -1.86
NEFMP07197 Y_RNA.393-201ENST00000383936 102 ntBASIC3.44□□□□□ -1.86
NEFMP07197 Y_RNA.521-201ENST00000384560 114 ntBASIC3.44□□□□□ -1.86
NEFMP07197 MIR518C-201ENST00000384822 101 ntBASIC3.44□□□□□ -1.86
NEFMP07197 MIR592-201ENST00000384959 97 ntBASIC3.44□□□□□ -1.86
NEFMP07197 AC097463.2-201ENST00000421074 142 ntBASIC3.44□□□□□ -1.86
NEFMP07197 AL035461.1-201ENST00000421490 332 ntBASIC3.44□□□□□ -1.86
NEFMP07197 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.44□□□□□ -1.86
NEFMP07197 SNORA31.15-201ENST00000516771 132 ntBASIC3.44□□□□□ -1.86
NEFMP07197 RNU6-1234P-201ENST00000516877 103 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 171.4 ms