Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC104260.1-201ENST00000616660 539 ntBASIC0.86□□□□□ -2.27
HLA-DPB1P04440 AC027335.2-201ENST00000624030 375 ntBASIC0.86□□□□□ -2.27
HLA-DPB1P04440 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.86□□□□□ -2.27
HLA-DPB1P04440 SNORA1B-201ENST00000362535 133 ntBASIC0.85□□□□□ -2.27
HLA-DPB1P04440 Y_RNA.267-201ENST00000364679 109 ntBASIC0.85□□□□□ -2.27
HLA-DPB1P04440 RNU6-593P-201ENST00000364716 112 ntBASIC0.85□□□□□ -2.27
HLA-DPB1P04440 RNU6-424P-201ENST00000384367 105 ntBASIC0.85□□□□□ -2.27
HLA-DPB1P04440 SNORA25-201ENST00000384384 134 ntBASIC0.85□□□□□ -2.27
HLA-DPB1P04440 MTCYBP10-201ENST00000424905 650 ntBASIC0.85□□□□□ -2.27
HLA-DPB1P04440 RAB28P5-201ENST00000427490 651 ntBASIC0.85□□□□□ -2.27
HLA-DPB1P04440 AC093850.1-201ENST00000454121 251 ntBASIC0.85□□□□□ -2.27
HLA-DPB1P04440 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.85□□□□□ -2.27
HLA-DPB1P04440 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.85□□□□□ -2.27
HLA-DPB1P04440 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.85□□□□□ -2.27
HLA-DPB1P04440 RNU6-917P-201ENST00000516294 104 ntBASIC0.85□□□□□ -2.27
HLA-DPB1P04440 RNU7-40P-201ENST00000516397 64 ntBASIC0.85□□□□□ -2.27
HLA-DPB1P04440 RNU6-1291P-201ENST00000516591 104 ntBASIC0.85□□□□□ -2.27
HLA-DPB1P04440 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.85□□□□□ -2.27
HLA-DPB1P04440 MIR1244-1-201ENST00000612829 85 ntBASIC0.85□□□□□ -2.27
HLA-DPB1P04440 MIR1244-3-201ENST00000635744 85 ntBASIC0.85□□□□□ -2.27
HLA-DPB1P04440 U6.115-201ENST00000636045 103 ntBASIC0.85□□□□□ -2.27
HLA-DPB1P04440 MIR1244-2-201ENST00000636449 85 ntBASIC0.85□□□□□ -2.27
HLA-DPB1P04440 MIR1244-4-202ENST00000636813 85 ntBASIC0.85□□□□□ -2.27
HLA-DPB1P04440 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
HLA-DPB1P04440 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.84□□□□□ -2.27
HLA-DPB1P04440 RNU4-14P-201ENST00000410858 122 ntBASIC0.84□□□□□ -2.27
HLA-DPB1P04440 RPL37P10-201ENST00000412884 288 ntBASIC0.84□□□□□ -2.27
HLA-DPB1P04440 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.84□□□□□ -2.27
HLA-DPB1P04440 AC092423.1-201ENST00000430165 186 ntBASIC0.84□□□□□ -2.27
HLA-DPB1P04440 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.84□□□□□ -2.27
HLA-DPB1P04440 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.84□□□□□ -2.27
HLA-DPB1P04440 AC107399.1-201ENST00000451226 265 ntBASIC0.84□□□□□ -2.27
HLA-DPB1P04440 PCNPP5-201ENST00000452246 481 ntBASIC0.84□□□□□ -2.27
HLA-DPB1P04440 AC048334.1-201ENST00000477975 159 ntBASIC0.84□□□□□ -2.27
HLA-DPB1P04440 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.84□□□□□ -2.27
HLA-DPB1P04440 AC074133.1-201ENST00000515696 183 ntBASIC0.84□□□□□ -2.27
HLA-DPB1P04440 SNORA40.9-201ENST00000515895 93 ntBASIC0.84□□□□□ -2.27
HLA-DPB1P04440 RNU6-120P-201ENST00000516077 103 ntBASIC0.84□□□□□ -2.27
HLA-DPB1P04440 RNU6-358P-201ENST00000516564 75 ntBASIC0.84□□□□□ -2.27
HLA-DPB1P04440 AL162424.1-201ENST00000602325 221 ntBASIC0.84□□□□□ -2.27
HLA-DPB1P04440 BX284668.6-201ENST00000606899 438 ntBASIC0.84□□□□□ -2.27
HLA-DPB1P04440 MIR410-201ENST00000362222 80 ntBASIC0.83□□□□□ -2.28
HLA-DPB1P04440 Y_RNA.265-201ENST00000364677 108 ntBASIC0.83□□□□□ -2.28
HLA-DPB1P04440 RNU6-117P-201ENST00000365415 107 ntBASIC0.83□□□□□ -2.28
HLA-DPB1P04440 Y_RNA.482-201ENST00000384377 111 ntBASIC0.83□□□□□ -2.28
HLA-DPB1P04440 Y_RNA.498-201ENST00000384460 102 ntBASIC0.83□□□□□ -2.28
HLA-DPB1P04440 MIR653-201ENST00000385279 96 ntBASIC0.83□□□□□ -2.28
HLA-DPB1P04440 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.83□□□□□ -2.28
HLA-DPB1P04440 MTND1P34-201ENST00000438556 671 ntBASIC0.83□□□□□ -2.28
HLA-DPB1P04440 AL137792.2-201ENST00000443484 235 ntBASIC0.83□□□□□ -2.28
HLA-DPB1P04440 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC0.83□□□□□ -2.28
HLA-DPB1P04440 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.83□□□□□ -2.28
HLA-DPB1P04440 RNU6-625P-201ENST00000459412 107 ntBASIC0.83□□□□□ -2.28
HLA-DPB1P04440 MTND4P17-201ENST00000470444 350 ntBASIC0.83□□□□□ -2.28
HLA-DPB1P04440 SNORA31.2-201ENST00000516019 134 ntBASIC0.83□□□□□ -2.28
HLA-DPB1P04440 RN7SKP49-201ENST00000516675 260 ntBASIC0.83□□□□□ -2.28
HLA-DPB1P04440 RNU6-63P-201ENST00000516690 95 ntBASIC0.83□□□□□ -2.28
HLA-DPB1P04440 RNU6-341P-201ENST00000516973 96 ntBASIC0.83□□□□□ -2.28
HLA-DPB1P04440 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.83□□□□□ -2.28
HLA-DPB1P04440 AC011712.1-201ENST00000588959 234 ntBASIC0.83□□□□□ -2.28
HLA-DPB1P04440 AL513534.2-201ENST00000603836 250 ntBASIC0.83□□□□□ -2.28
HLA-DPB1P04440 SNORA28-201ENST00000606769 126 ntBASIC0.83□□□□□ -2.28
HLA-DPB1P04440 MIR3674-201ENST00000636576 68 ntBASIC0.83□□□□□ -2.28
HLA-DPB1P04440 MIRLET7C-201ENST00000362160 84 ntBASIC0.82□□□□□ -2.28
HLA-DPB1P04440 RNU6-199P-201ENST00000362954 107 ntBASIC0.82□□□□□ -2.28
HLA-DPB1P04440 RNY1P10-201ENST00000363268 113 ntBASIC0.82□□□□□ -2.28
HLA-DPB1P04440 Y_RNA.363-201ENST00000365529 113 ntBASIC0.82□□□□□ -2.28
HLA-DPB1P04440 SNORA70.7-201ENST00000384159 133 ntBASIC0.82□□□□□ -2.28
HLA-DPB1P04440 RNU6-136P-201ENST00000384663 107 ntBASIC0.82□□□□□ -2.28
HLA-DPB1P04440 RNU6-376P-201ENST00000384731 106 ntBASIC0.82□□□□□ -2.28
HLA-DPB1P04440 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
HLA-DPB1P04440 SNORA75.4-201ENST00000391278 119 ntBASIC0.82□□□□□ -2.28
HLA-DPB1P04440 MTCYBP4-201ENST00000401524 249 ntBASIC0.82□□□□□ -2.28
HLA-DPB1P04440 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.82□□□□□ -2.28
HLA-DPB1P04440 RNU5A-5P-201ENST00000411054 116 ntBASIC0.82□□□□□ -2.28
HLA-DPB1P04440 RPS23P4-201ENST00000487908 423 ntBASIC0.82□□□□□ -2.28
HLA-DPB1P04440 AC105758.1-201ENST00000506038 399 ntBASIC0.82□□□□□ -2.28
HLA-DPB1P04440 SNORD116-28-201ENST00000516123 91 ntBASIC0.82□□□□□ -2.28
HLA-DPB1P04440 RNU2-56P-201ENST00000516826 190 ntBASIC0.82□□□□□ -2.28
HLA-DPB1P04440 RNU7-30P-201ENST00000516835 62 ntBASIC0.82□□□□□ -2.28
HLA-DPB1P04440 CYCSP23-201ENST00000519781 313 ntBASIC0.82□□□□□ -2.28
HLA-DPB1P04440 RPL21P9-201ENST00000556149 474 ntBASIC0.82□□□□□ -2.28
HLA-DPB1P04440 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.82□□□□□ -2.28
HLA-DPB1P04440 AC055872.1-201ENST00000570978 278 ntBASIC0.82□□□□□ -2.28
HLA-DPB1P04440 MIR4781-201ENST00000585250 76 ntBASIC0.82□□□□□ -2.28
HLA-DPB1P04440 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.82□□□□□ -2.28
HLA-DPB1P04440 AL117336.2-201ENST00000602435 335 ntBASIC0.82□□□□□ -2.28
HLA-DPB1P04440 AC005828.6-201ENST00000606610 232 ntBASIC0.82□□□□□ -2.28
HLA-DPB1P04440 GHRLOS.1-201ENST00000610995 70 ntBASIC0.82□□□□□ -2.28
HLA-DPB1P04440 AC092794.2-201ENST00000620933 563 ntBASIC0.82□□□□□ -2.28
HLA-DPB1P04440 AC027514.1-201ENST00000588561 1603 ntBASIC0.82□□□□□ -2.28
HLA-DPB1P04440 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
HLA-DPB1P04440 Y_RNA.72-201ENST00000362894 103 ntBASIC0.81□□□□□ -2.28
HLA-DPB1P04440 RNU6-99P-201ENST00000364721 107 ntBASIC0.81□□□□□ -2.28
HLA-DPB1P04440 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
HLA-DPB1P04440 RNU6-910P-201ENST00000390844 107 ntBASIC0.81□□□□□ -2.28
HLA-DPB1P04440 MIR873-201ENST00000401120 77 ntBASIC0.81□□□□□ -2.28
HLA-DPB1P04440 SNORD12B-201ENST00000410433 91 ntBASIC0.81□□□□□ -2.28
HLA-DPB1P04440 FCF1P9-201ENST00000412546 282 ntBASIC0.81□□□□□ -2.28
HLA-DPB1P04440 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 143.6 ms