Protein–RNA interactions for Protein: P04049

RAF1, RAF proto-oncogene serine/threonine-protein kinase, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1P04049 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.79□□□□□ -2.12
RAF1P04049 MIR3169-201ENST00000578032 83 ntBASIC1.79□□□□□ -2.12
RAF1P04049 PRR13P7-201ENST00000605538 430 ntBASIC1.79□□□□□ -2.12
RAF1P04049 AL162730.1-201ENST00000605734 292 ntBASIC1.79□□□□□ -2.12
RAF1P04049 AC008555.8-201ENST00000623602 2168 ntBASIC1.79□□□□□ -2.12
RAF1P04049 RNU6-238P-201ENST00000363313 106 ntBASIC1.78□□□□□ -2.12
RAF1P04049 RNU6-1175P-201ENST00000365200 107 ntBASIC1.78□□□□□ -2.12
RAF1P04049 Y_RNA.574-201ENST00000384766 95 ntBASIC1.78□□□□□ -2.12
RAF1P04049 RNA5SP489-201ENST00000410986 109 ntBASIC1.78□□□□□ -2.12
RAF1P04049 RNU6-1199P-201ENST00000411249 104 ntBASIC1.78□□□□□ -2.12
RAF1P04049 RPL21P38-201ENST00000418090 167 ntBASIC1.78□□□□□ -2.12
RAF1P04049 AL158823.1-201ENST00000418441 478 ntBASIC1.78□□□□□ -2.12
RAF1P04049 MTND3P2-201ENST00000438452 342 ntBASIC1.78□□□□□ -2.12
RAF1P04049 RNA5SP57-201ENST00000459463 123 ntBASIC1.78□□□□□ -2.12
RAF1P04049 AC025465.3-201ENST00000510570 311 ntBASIC1.78□□□□□ -2.12
RAF1P04049 RNA5SP182-201ENST00000516064 82 ntBASIC1.78□□□□□ -2.12
RAF1P04049 RNU2-34P-201ENST00000516534 121 ntBASIC1.78□□□□□ -2.12
RAF1P04049 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.78□□□□□ -2.12
RAF1P04049 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.78□□□□□ -2.12
RAF1P04049 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.78□□□□□ -2.12
RAF1P04049 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.78□□□□□ -2.12
RAF1P04049 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.78□□□□□ -2.12
RAF1P04049 MIR376A1-201ENST00000616574 68 ntBASIC1.78□□□□□ -2.12
RAF1P04049 Y_RNA.47-201ENST00000362697 108 ntBASIC1.77□□□□□ -2.13
RAF1P04049 Y_RNA.226-201ENST00000364337 114 ntBASIC1.77□□□□□ -2.13
RAF1P04049 SNORA72.2-201ENST00000365028 127 ntBASIC1.77□□□□□ -2.13
RAF1P04049 RNU4-30P-201ENST00000410245 143 ntBASIC1.77□□□□□ -2.13
RAF1P04049 RNU5A-5P-201ENST00000411054 116 ntBASIC1.77□□□□□ -2.13
RAF1P04049 AC016909.1-201ENST00000415916 166 ntBASIC1.77□□□□□ -2.13
RAF1P04049 RPL23AP6-201ENST00000446637 472 ntBASIC1.77□□□□□ -2.13
RAF1P04049 RNU1-131P-201ENST00000458943 161 ntBASIC1.77□□□□□ -2.13
RAF1P04049 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.77□□□□□ -2.13
RAF1P04049 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.77□□□□□ -2.13
RAF1P04049 RNU6-1143P-201ENST00000516125 104 ntBASIC1.77□□□□□ -2.13
RAF1P04049 RNU6-856P-201ENST00000516959 98 ntBASIC1.77□□□□□ -2.13
RAF1P04049 RNU2-12P-201ENST00000517216 168 ntBASIC1.77□□□□□ -2.13
RAF1P04049 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.77□□□□□ -2.13
RAF1P04049 MIR4299-201ENST00000577899 72 ntBASIC1.77□□□□□ -2.13
RAF1P04049 AC022441.3-201ENST00000605737 136 ntBASIC1.77□□□□□ -2.13
RAF1P04049 AC011373.1-201ENST00000607270 237 ntBASIC1.77□□□□□ -2.13
RAF1P04049 U1.36-201ENST00000620684 176 ntBASIC1.77□□□□□ -2.13
RAF1P04049 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
RAF1P04049 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
RAF1P04049 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
RAF1P04049 snoU2_19.2-201ENST00000363024 80 ntBASIC1.76□□□□□ -2.13
RAF1P04049 SNORD113-8-201ENST00000363497 74 ntBASIC1.76□□□□□ -2.13
RAF1P04049 Y_RNA.176-201ENST00000363815 109 ntBASIC1.76□□□□□ -2.13
RAF1P04049 Y_RNA.286-201ENST00000364813 102 ntBASIC1.76□□□□□ -2.13
RAF1P04049 Y_RNA.446-201ENST00000384178 104 ntBASIC1.76□□□□□ -2.13
RAF1P04049 RNU6-102P-201ENST00000384485 104 ntBASIC1.76□□□□□ -2.13
RAF1P04049 MIR215-201ENST00000384858 110 ntBASIC1.76□□□□□ -2.13
RAF1P04049 MIR676-201ENST00000390702 67 ntBASIC1.76□□□□□ -2.13
RAF1P04049 RNU2-54P-201ENST00000410299 190 ntBASIC1.76□□□□□ -2.13
RAF1P04049 AC060773.1-201ENST00000421698 310 ntBASIC1.76□□□□□ -2.13
RAF1P04049 MTCYBP9-201ENST00000431021 303 ntBASIC1.76□□□□□ -2.13
RAF1P04049 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.76□□□□□ -2.13
RAF1P04049 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.76□□□□□ -2.13
RAF1P04049 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.76□□□□□ -2.13
RAF1P04049 MTCO2P24-201ENST00000515611 426 ntBASIC1.76□□□□□ -2.13
RAF1P04049 RNU7-110P-201ENST00000516891 62 ntBASIC1.76□□□□□ -2.13
RAF1P04049 AC025647.1-201ENST00000517879 253 ntBASIC1.76□□□□□ -2.13
RAF1P04049 AP003733.2-201ENST00000529409 171 ntBASIC1.76□□□□□ -2.13
RAF1P04049 MIR3122-201ENST00000577243 73 ntBASIC1.76□□□□□ -2.13
RAF1P04049 AL773524.1-201ENST00000614065 229 ntBASIC1.76□□□□□ -2.13
RAF1P04049 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.76□□□□□ -2.13
RAF1P04049 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
RAF1P04049 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
RAF1P04049 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
RAF1P04049 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
RAF1P04049 Y_RNA.149-201ENST00000363558 117 ntBASIC1.75□□□□□ -2.13
RAF1P04049 SNORA8-201ENST00000384574 139 ntBASIC1.75□□□□□ -2.13
RAF1P04049 Y_RNA.602-201ENST00000410535 92 ntBASIC1.75□□□□□ -2.13
RAF1P04049 CYCSP49-201ENST00000420810 319 ntBASIC1.75□□□□□ -2.13
RAF1P04049 AL445685.2-201ENST00000422551 342 ntBASIC1.75□□□□□ -2.13
RAF1P04049 HMGN2P19-201ENST00000425149 265 ntBASIC1.75□□□□□ -2.13
RAF1P04049 SNORD65B-201ENST00000459126 73 ntBASIC1.75□□□□□ -2.13
RAF1P04049 HMGB3P17-201ENST00000504195 649 ntBASIC1.75□□□□□ -2.13
RAF1P04049 RNVU1-2-201ENST00000516326 135 ntBASIC1.75□□□□□ -2.13
RAF1P04049 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.75□□□□□ -2.13
RAF1P04049 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.75□□□□□ -2.13
RAF1P04049 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.75□□□□□ -2.13
RAF1P04049 AC006001.4-201ENST00000622243 395 ntBASIC1.75□□□□□ -2.13
RAF1P04049 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.75□□□□□ -2.13
RAF1P04049 U6.115-201ENST00000636045 103 ntBASIC1.75□□□□□ -2.13
RAF1P04049 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.75□□□□□ -2.13
RAF1P04049 AL159152.1-201ENST00000635019 2587 ntBASIC1.75□□□□□ -2.13
RAF1P04049 SNORD81.1-201ENST00000363064 77 ntBASIC1.74□□□□□ -2.13
RAF1P04049 Y_RNA.243-201ENST00000364481 109 ntBASIC1.74□□□□□ -2.13
RAF1P04049 SNORA40.18-201ENST00000391200 128 ntBASIC1.74□□□□□ -2.13
RAF1P04049 AL355796.1-201ENST00000406706 323 ntBASIC1.74□□□□□ -2.13
RAF1P04049 RNU2-2P-201ENST00000410396 191 ntBASIC1.74□□□□□ -2.13
RAF1P04049 AL390729.2-201ENST00000416137 156 ntBASIC1.74□□□□□ -2.13
RAF1P04049 AC244636.1-201ENST00000421152 228 ntBASIC1.74□□□□□ -2.13
RAF1P04049 AC108667.1-201ENST00000428618 249 ntBASIC1.74□□□□□ -2.13
RAF1P04049 HSPE1P25-201ENST00000455484 251 ntBASIC1.74□□□□□ -2.13
RAF1P04049 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.74□□□□□ -2.13
RAF1P04049 SEPT14P8-201ENST00000508026 178 ntBASIC1.74□□□□□ -2.13
RAF1P04049 RNU6-496P-201ENST00000516145 99 ntBASIC1.74□□□□□ -2.13
RAF1P04049 RNU6-155P-201ENST00000516347 100 ntBASIC1.74□□□□□ -2.13
RAF1P04049 SUMO2P18-201ENST00000518873 252 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 141.9 ms