Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 SNORD48-201ENST00000364953 64 ntBASIC1.94□□□□□ -2.1
COL2A1P02458 Y_RNA.374-201ENST00000365606 101 ntBASIC1.94□□□□□ -2.1
COL2A1P02458 CD24P4-201ENST00000382840 243 ntBASIC1.94□□□□□ -2.1
COL2A1P02458 RNU6-211P-201ENST00000384047 107 ntBASIC1.94□□□□□ -2.1
COL2A1P02458 RNU6-217P-201ENST00000384164 104 ntBASIC1.94□□□□□ -2.1
COL2A1P02458 RNU6-1035P-201ENST00000384477 107 ntBASIC1.94□□□□□ -2.1
COL2A1P02458 MIR1290-201ENST00000408735 78 ntBASIC1.94□□□□□ -2.1
COL2A1P02458 RNU6-394P-201ENST00000410735 107 ntBASIC1.94□□□□□ -2.1
COL2A1P02458 RNA5SP489-201ENST00000410986 109 ntBASIC1.94□□□□□ -2.1
COL2A1P02458 MTATP6P29-201ENST00000415057 132 ntBASIC1.94□□□□□ -2.1
COL2A1P02458 AC019205.3-201ENST00000424573 156 ntBASIC1.94□□□□□ -2.1
COL2A1P02458 TMSB4XP3-201ENST00000445144 114 ntBASIC1.94□□□□□ -2.1
COL2A1P02458 UQCRBP2-201ENST00000447827 297 ntBASIC1.94□□□□□ -2.1
COL2A1P02458 U8.19-201ENST00000459095 133 ntBASIC1.94□□□□□ -2.1
COL2A1P02458 snoU13.28-201ENST00000459235 104 ntBASIC1.94□□□□□ -2.1
COL2A1P02458 AP001324.2-201ENST00000461163 319 ntBASIC1.94□□□□□ -2.1
COL2A1P02458 RPS27AP10-201ENST00000496103 208 ntBASIC1.94□□□□□ -2.1
COL2A1P02458 RNU6-107P-201ENST00000516643 102 ntBASIC1.94□□□□□ -2.1
COL2A1P02458 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.94□□□□□ -2.1
COL2A1P02458 HMGN2P15-201ENST00000585707 270 ntBASIC1.94□□□□□ -2.1
COL2A1P02458 DEFB117-201ENST00000602356 141 ntBASIC1.94□□□□□ -2.1
COL2A1P02458 AL713866.2-201ENST00000603579 219 ntBASIC1.94□□□□□ -2.1
COL2A1P02458 AC072026.1-201ENST00000605023 201 ntBASIC1.94□□□□□ -2.1
COL2A1P02458 AC010999.1-201ENST00000611856 324 ntBASIC1.94□□□□□ -2.1
COL2A1P02458 MIR6734-201ENST00000621166 68 ntBASIC1.94□□□□□ -2.1
COL2A1P02458 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.94□□□□□ -2.1
COL2A1P02458 AC134026.1-201ENST00000623249 2239 ntBASIC1.94□□□□□ -2.1
COL2A1P02458 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.94□□□□□ -2.1
COL2A1P02458 SNORD115-32-201ENST00000364079 82 ntBASIC1.94□□□□□ -2.1
COL2A1P02458 RNU6-704P-201ENST00000364162 103 ntBASIC1.94□□□□□ -2.1
COL2A1P02458 RNU1-109P-201ENST00000383960 147 ntBASIC1.94□□□□□ -2.1
COL2A1P02458 RNU6-1027P-201ENST00000383998 107 ntBASIC1.94□□□□□ -2.1
COL2A1P02458 RNU6-1077P-201ENST00000410506 102 ntBASIC1.94□□□□□ -2.1
COL2A1P02458 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.94□□□□□ -2.1
COL2A1P02458 AC244670.1-201ENST00000436879 112 ntBASIC1.94□□□□□ -2.1
COL2A1P02458 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.94□□□□□ -2.1
COL2A1P02458 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.94□□□□□ -2.1
COL2A1P02458 UBBP3-201ENST00000445497 241 ntBASIC1.94□□□□□ -2.1
COL2A1P02458 Z96811.1-201ENST00000445880 108 ntBASIC1.94□□□□□ -2.1
COL2A1P02458 RNU6-625P-201ENST00000459412 107 ntBASIC1.94□□□□□ -2.1
COL2A1P02458 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.94□□□□□ -2.1
COL2A1P02458 RNA5SP220-201ENST00000516298 104 ntBASIC1.94□□□□□ -2.1
COL2A1P02458 RNU6-1212P-201ENST00000517023 104 ntBASIC1.94□□□□□ -2.1
COL2A1P02458 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.94□□□□□ -2.1
COL2A1P02458 AP002001.1-203ENST00000534002 267 ntBASIC1.94□□□□□ -2.1
COL2A1P02458 AK6P2-201ENST00000549020 471 ntBASIC1.94□□□□□ -2.1
COL2A1P02458 CR383656.8-201ENST00000549046 145 ntBASIC1.94□□□□□ -2.1
COL2A1P02458 AC018448.1-201ENST00000552843 316 ntBASIC1.94□□□□□ -2.1
COL2A1P02458 AL078603.1-201ENST00000603824 313 ntBASIC1.94□□□□□ -2.1
COL2A1P02458 RNU2-4P-201ENST00000606190 192 ntBASIC1.94□□□□□ -2.1
COL2A1P02458 MIR3529-201ENST00000637713 78 ntBASIC1.94□□□□□ -2.1
COL2A1P02458 AC100821.1-201ENST00000523153 2479 ntBASIC1.93□□□□□ -2.1
COL2A1P02458 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
COL2A1P02458 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
COL2A1P02458 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
COL2A1P02458 RNU6-529P-201ENST00000363383 104 ntBASIC1.93□□□□□ -2.1
COL2A1P02458 Y_RNA.179-201ENST00000363844 90 ntBASIC1.93□□□□□ -2.1
COL2A1P02458 RNU6-324P-201ENST00000363957 106 ntBASIC1.93□□□□□ -2.1
COL2A1P02458 Y_RNA.304-201ENST00000365011 112 ntBASIC1.93□□□□□ -2.1
COL2A1P02458 Y_RNA.354-201ENST00000365448 111 ntBASIC1.93□□□□□ -2.1
COL2A1P02458 SNORD116-18-201ENST00000383961 92 ntBASIC1.93□□□□□ -2.1
COL2A1P02458 AL591034.1-201ENST00000407447 340 ntBASIC1.93□□□□□ -2.1
COL2A1P02458 RNU5E-9P-201ENST00000411164 104 ntBASIC1.93□□□□□ -2.1
COL2A1P02458 RNA5SP492-201ENST00000411330 114 ntBASIC1.93□□□□□ -2.1
COL2A1P02458 RN7SKP101-201ENST00000411376 320 ntBASIC1.93□□□□□ -2.1
COL2A1P02458 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.93□□□□□ -2.1
COL2A1P02458 BTF3P11-201ENST00000426582 477 ntBASIC1.93□□□□□ -2.1
COL2A1P02458 AIG1P1-201ENST00000503376 148 ntBASIC1.93□□□□□ -2.1
COL2A1P02458 ATP5EP1-201ENST00000510257 156 ntBASIC1.93□□□□□ -2.1
COL2A1P02458 RNU5F-8P-201ENST00000515941 111 ntBASIC1.93□□□□□ -2.1
COL2A1P02458 RNU6-155P-201ENST00000516347 100 ntBASIC1.93□□□□□ -2.1
COL2A1P02458 AC021739.1-201ENST00000559631 174 ntBASIC1.93□□□□□ -2.1
COL2A1P02458 MIR548AI-201ENST00000579940 88 ntBASIC1.93□□□□□ -2.1
COL2A1P02458 MIR4423-201ENST00000580922 80 ntBASIC1.93□□□□□ -2.1
COL2A1P02458 MIR4282-201ENST00000583613 67 ntBASIC1.93□□□□□ -2.1
COL2A1P02458 MIR3199-2-201ENST00000636243 86 ntBASIC1.93□□□□□ -2.1
COL2A1P02458 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
COL2A1P02458 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
COL2A1P02458 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
COL2A1P02458 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.92□□□□□ -2.1
COL2A1P02458 RNU6-50P-201ENST00000362356 103 ntBASIC1.92□□□□□ -2.1
COL2A1P02458 RNU6-1290P-201ENST00000362957 109 ntBASIC1.92□□□□□ -2.1
COL2A1P02458 RNU6-1048P-201ENST00000364054 107 ntBASIC1.92□□□□□ -2.1
COL2A1P02458 SNORD87-201ENST00000364849 89 ntBASIC1.92□□□□□ -2.1
COL2A1P02458 Y_RNA.329-201ENST00000365209 107 ntBASIC1.92□□□□□ -2.1
COL2A1P02458 Y_RNA.572-201ENST00000384757 98 ntBASIC1.92□□□□□ -2.1
COL2A1P02458 RNU6-1199P-201ENST00000411249 104 ntBASIC1.92□□□□□ -2.1
COL2A1P02458 AC012306.1-201ENST00000423267 114 ntBASIC1.92□□□□□ -2.1
COL2A1P02458 RPL23AP95-201ENST00000426806 265 ntBASIC1.92□□□□□ -2.1
COL2A1P02458 MTATP6P7-201ENST00000453315 681 ntBASIC1.92□□□□□ -2.1
COL2A1P02458 RNA5SP310-201ENST00000459084 116 ntBASIC1.92□□□□□ -2.1
COL2A1P02458 RNA5SP82-201ENST00000516707 92 ntBASIC1.92□□□□□ -2.1
COL2A1P02458 RNU6-1282P-201ENST00000516735 96 ntBASIC1.92□□□□□ -2.1
COL2A1P02458 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC1.92□□□□□ -2.1
COL2A1P02458 AC022441.3-201ENST00000605737 136 ntBASIC1.92□□□□□ -2.1
COL2A1P02458 AL008718.3-201ENST00000610217 321 ntBASIC1.92□□□□□ -2.1
COL2A1P02458 MIR6134-201ENST00000617606 109 ntBASIC1.92□□□□□ -2.1
COL2A1P02458 U6.106-201ENST00000636360 105 ntBASIC1.92□□□□□ -2.1
COL2A1P02458 AC068700.1-201ENST00000565862 3754 ntBASIC1.92□□□□□ -2.1
COL2A1P02458 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms