Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 RPL23AP36-201ENST00000413895 458 ntBASIC2.08□□□□□ -2.08
LDLRP01130 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.08□□□□□ -2.08
LDLRP01130 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.08□□□□□ -2.08
LDLRP01130 AC074198.2-201ENST00000508153 258 ntBASIC2.08□□□□□ -2.08
LDLRP01130 SNORA40.9-201ENST00000515895 93 ntBASIC2.08□□□□□ -2.08
LDLRP01130 RNU1-40P-201ENST00000516816 164 ntBASIC2.08□□□□□ -2.08
LDLRP01130 RNU1-97P-201ENST00000516872 164 ntBASIC2.08□□□□□ -2.08
LDLRP01130 RNA5SP54-201ENST00000516951 92 ntBASIC2.08□□□□□ -2.08
LDLRP01130 RNU2-31P-201ENST00000516954 155 ntBASIC2.08□□□□□ -2.08
LDLRP01130 RNU6-1212P-201ENST00000517023 104 ntBASIC2.08□□□□□ -2.08
LDLRP01130 AC022559.1-201ENST00000520905 205 ntBASIC2.08□□□□□ -2.08
LDLRP01130 AC024405.2-202ENST00000532731 184 ntBASIC2.08□□□□□ -2.08
LDLRP01130 NDUFA5P6-201ENST00000542110 379 ntBASIC2.08□□□□□ -2.08
LDLRP01130 AC233702.2-202ENST00000562547 291 ntBASIC2.08□□□□□ -2.08
LDLRP01130 MIR4282-201ENST00000583613 67 ntBASIC2.08□□□□□ -2.08
LDLRP01130 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.08□□□□□ -2.08
LDLRP01130 TCL6_2.1-201ENST00000615162 119 ntBASIC2.08□□□□□ -2.08
LDLRP01130 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
LDLRP01130 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
LDLRP01130 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.08□□□□□ -2.08
LDLRP01130 BX322639.1-202ENST00000423987 2213 ntBASIC2.07□□□□□ -2.08
LDLRP01130 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
LDLRP01130 RNU6-545P-201ENST00000362681 104 ntBASIC2.07□□□□□ -2.08
LDLRP01130 RNU6-873P-201ENST00000363833 107 ntBASIC2.07□□□□□ -2.08
LDLRP01130 Y_RNA.275-201ENST00000364726 110 ntBASIC2.07□□□□□ -2.08
LDLRP01130 RNA5SP138-201ENST00000365098 114 ntBASIC2.07□□□□□ -2.08
LDLRP01130 RNU6-1175P-201ENST00000365200 107 ntBASIC2.07□□□□□ -2.08
LDLRP01130 RNU6-438P-201ENST00000365561 103 ntBASIC2.07□□□□□ -2.08
LDLRP01130 RNU6-746P-201ENST00000384112 109 ntBASIC2.07□□□□□ -2.08
LDLRP01130 RNU6-187P-201ENST00000384139 106 ntBASIC2.07□□□□□ -2.08
LDLRP01130 AL033519.2-201ENST00000403958 392 ntBASIC2.07□□□□□ -2.08
LDLRP01130 MIR320B2-201ENST00000408479 138 ntBASIC2.07□□□□□ -2.08
LDLRP01130 AC004866.1-201ENST00000411748 78 ntBASIC2.07□□□□□ -2.08
LDLRP01130 AL356379.1-201ENST00000414105 126 ntBASIC2.07□□□□□ -2.08
LDLRP01130 COX6CP10-201ENST00000416832 224 ntBASIC2.07□□□□□ -2.08
LDLRP01130 MTCO1P5-201ENST00000433573 344 ntBASIC2.07□□□□□ -2.08
LDLRP01130 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.07□□□□□ -2.08
LDLRP01130 AC009237.7-201ENST00000447357 229 ntBASIC2.07□□□□□ -2.08
LDLRP01130 AC025033.1-201ENST00000463883 194 ntBASIC2.07□□□□□ -2.08
LDLRP01130 AC093259.1-201ENST00000509755 300 ntBASIC2.07□□□□□ -2.08
LDLRP01130 RNU7-110P-201ENST00000516891 62 ntBASIC2.07□□□□□ -2.08
LDLRP01130 RPL21P9-201ENST00000556149 474 ntBASIC2.07□□□□□ -2.08
LDLRP01130 AC007229.1-201ENST00000590455 412 ntBASIC2.07□□□□□ -2.08
LDLRP01130 AC008749.1-201ENST00000597650 306 ntBASIC2.07□□□□□ -2.08
LDLRP01130 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.07□□□□□ -2.08
LDLRP01130 AL590240.4-201ENST00000616908 390 ntBASIC2.07□□□□□ -2.08
LDLRP01130 AC009831.4-201ENST00000620744 325 ntBASIC2.07□□□□□ -2.08
LDLRP01130 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.07□□□□□ -2.08
LDLRP01130 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
LDLRP01130 UBE2WP1-201ENST00000362030 340 ntBASIC2.06□□□□□ -2.08
LDLRP01130 Y_RNA.136-201ENST00000363444 102 ntBASIC2.06□□□□□ -2.08
LDLRP01130 SNORA64-201ENST00000384674 134 ntBASIC2.06□□□□□ -2.08
LDLRP01130 SNORA53-201ENST00000391141 249 ntBASIC2.06□□□□□ -2.08
LDLRP01130 AL357139.1-201ENST00000407792 426 ntBASIC2.06□□□□□ -2.08
LDLRP01130 Y_RNA.595-201ENST00000410403 105 ntBASIC2.06□□□□□ -2.08
LDLRP01130 RN7SKP51-201ENST00000410781 304 ntBASIC2.06□□□□□ -2.08
LDLRP01130 EDDM3CP-201ENST00000415977 425 ntBASIC2.06□□□□□ -2.08
LDLRP01130 AC018634.1-201ENST00000437554 401 ntBASIC2.06□□□□□ -2.08
LDLRP01130 MRPS10P1-201ENST00000448483 130 ntBASIC2.06□□□□□ -2.08
LDLRP01130 RPL23AP7-203ENST00000449021 469 ntBASIC2.06□□□□□ -2.08
LDLRP01130 AL021397.1-201ENST00000451806 248 ntBASIC2.06□□□□□ -2.08
LDLRP01130 AC055731.1-201ENST00000474387 401 ntBASIC2.06□□□□□ -2.08
LDLRP01130 AC091959.1-201ENST00000495857 238 ntBASIC2.06□□□□□ -2.08
LDLRP01130 AC108729.3-201ENST00000513484 108 ntBASIC2.06□□□□□ -2.08
LDLRP01130 RNU6-861P-201ENST00000516745 106 ntBASIC2.06□□□□□ -2.08
LDLRP01130 AC087441.2-201ENST00000529141 262 ntBASIC2.06□□□□□ -2.08
LDLRP01130 AP002392.1-201ENST00000537692 208 ntBASIC2.06□□□□□ -2.08
LDLRP01130 MIR4498-201ENST00000577599 66 ntBASIC2.06□□□□□ -2.08
LDLRP01130 MIR3133-201ENST00000583157 78 ntBASIC2.06□□□□□ -2.08
LDLRP01130 AL162424.1-201ENST00000602325 221 ntBASIC2.06□□□□□ -2.08
LDLRP01130 MZT1P2-201ENST00000604387 248 ntBASIC2.06□□□□□ -2.08
LDLRP01130 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.06□□□□□ -2.08
LDLRP01130 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
LDLRP01130 MIR410-201ENST00000362222 80 ntBASIC2.05□□□□□ -2.08
LDLRP01130 Y_RNA.82-201ENST00000363000 102 ntBASIC2.05□□□□□ -2.08
LDLRP01130 Y_RNA.92-201ENST00000363043 102 ntBASIC2.05□□□□□ -2.08
LDLRP01130 Y_RNA.101-201ENST00000363154 102 ntBASIC2.05□□□□□ -2.08
LDLRP01130 RNU6-727P-201ENST00000363592 107 ntBASIC2.05□□□□□ -2.08
LDLRP01130 Y_RNA.230-201ENST00000364348 109 ntBASIC2.05□□□□□ -2.08
LDLRP01130 Y_RNA.235-201ENST00000364412 102 ntBASIC2.05□□□□□ -2.08
LDLRP01130 Y_RNA.306-201ENST00000365015 102 ntBASIC2.05□□□□□ -2.08
LDLRP01130 Y_RNA.312-201ENST00000365089 102 ntBASIC2.05□□□□□ -2.08
LDLRP01130 Y_RNA.322-201ENST00000365151 102 ntBASIC2.05□□□□□ -2.08
LDLRP01130 RNU4-52P-201ENST00000384209 138 ntBASIC2.05□□□□□ -2.08
LDLRP01130 RNU6-662P-201ENST00000384253 104 ntBASIC2.05□□□□□ -2.08
LDLRP01130 Y_RNA.506-201ENST00000384494 102 ntBASIC2.05□□□□□ -2.08
LDLRP01130 RNU6-125P-201ENST00000384505 107 ntBASIC2.05□□□□□ -2.08
LDLRP01130 SNORA26.9-201ENST00000391322 122 ntBASIC2.05□□□□□ -2.08
LDLRP01130 MIR1262-201ENST00000408276 93 ntBASIC2.05□□□□□ -2.08
LDLRP01130 MIR1287-201ENST00000408492 90 ntBASIC2.05□□□□□ -2.08
LDLRP01130 RNA5SP338-201ENST00000410495 85 ntBASIC2.05□□□□□ -2.08
LDLRP01130 RNU6-1199P-201ENST00000411249 104 ntBASIC2.05□□□□□ -2.08
LDLRP01130 ELOCP21-201ENST00000412558 336 ntBASIC2.05□□□□□ -2.08
LDLRP01130 AL137159.1-201ENST00000452808 512 ntBASIC2.05□□□□□ -2.08
LDLRP01130 SNORD2.1-201ENST00000458762 69 ntBASIC2.05□□□□□ -2.08
LDLRP01130 Y_RNA.650-201ENST00000459002 102 ntBASIC2.05□□□□□ -2.08
LDLRP01130 COX6CP14-201ENST00000469580 174 ntBASIC2.05□□□□□ -2.08
LDLRP01130 AC079804.2-201ENST00000490376 200 ntBASIC2.05□□□□□ -2.08
LDLRP01130 RNU6-1053P-201ENST00000515930 101 ntBASIC2.05□□□□□ -2.08
LDLRP01130 SNORA27.4-201ENST00000516650 95 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms