Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 RNA5SP364-201ENST00000516938 78 ntBASIC1.73□□□□□ -2.13
CLDN1O95832 RNU2-19P-201ENST00000517288 84 ntBASIC1.73□□□□□ -2.13
CLDN1O95832 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.73□□□□□ -2.13
CLDN1O95832 MIR3169-201ENST00000578032 83 ntBASIC1.73□□□□□ -2.13
CLDN1O95832 MIR3684-201ENST00000579779 74 ntBASIC1.73□□□□□ -2.13
CLDN1O95832 MIR4303-201ENST00000581299 66 ntBASIC1.73□□□□□ -2.13
CLDN1O95832 AC005176.2-201ENST00000596933 147 ntBASIC1.73□□□□□ -2.13
CLDN1O95832 AC130454.1-201ENST00000622948 401 ntBASIC1.73□□□□□ -2.13
CLDN1O95832 AC091932.3-201ENST00000624223 323 ntBASIC1.73□□□□□ -2.13
CLDN1O95832 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
CLDN1O95832 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
CLDN1O95832 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.72□□□□□ -2.13
CLDN1O95832 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.72□□□□□ -2.13
CLDN1O95832 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CLDN1O95832 Y_RNA.143-201ENST00000363520 106 ntBASIC1.72□□□□□ -2.13
CLDN1O95832 Y_RNA.243-201ENST00000364481 109 ntBASIC1.72□□□□□ -2.13
CLDN1O95832 RNA5SP160-201ENST00000364866 120 ntBASIC1.72□□□□□ -2.13
CLDN1O95832 Y_RNA.540-201ENST00000384638 111 ntBASIC1.72□□□□□ -2.13
CLDN1O95832 AL627390.1-201ENST00000396055 340 ntBASIC1.72□□□□□ -2.13
CLDN1O95832 RNU2-54P-201ENST00000410299 190 ntBASIC1.72□□□□□ -2.13
CLDN1O95832 RNU5A-5P-201ENST00000411054 116 ntBASIC1.72□□□□□ -2.13
CLDN1O95832 RNU6-1199P-201ENST00000411249 104 ntBASIC1.72□□□□□ -2.13
CLDN1O95832 RNU6-57P-201ENST00000411348 103 ntBASIC1.72□□□□□ -2.13
CLDN1O95832 AC008134.1-201ENST00000420943 193 ntBASIC1.72□□□□□ -2.13
CLDN1O95832 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.72□□□□□ -2.13
CLDN1O95832 LINC01399-202ENST00000458450 244 ntBASIC1.72□□□□□ -2.13
CLDN1O95832 AC008749.1-201ENST00000597650 306 ntBASIC1.72□□□□□ -2.13
CLDN1O95832 SNRPGP19-201ENST00000603826 189 ntBASIC1.72□□□□□ -2.13
CLDN1O95832 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.72□□□□□ -2.13
CLDN1O95832 SDR42E1P4-201ENST00000620894 481 ntBASIC1.72□□□□□ -2.13
CLDN1O95832 AC127459.3-201ENST00000624328 466 ntBASIC1.72□□□□□ -2.13
CLDN1O95832 AC022513.1-201ENST00000624512 117 ntBASIC1.72□□□□□ -2.13
CLDN1O95832 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.72□□□□□ -2.13
CLDN1O95832 AL159152.1-201ENST00000635019 2587 ntBASIC1.71□□□□□ -2.14
CLDN1O95832 RNU1-58P-201ENST00000362413 163 ntBASIC1.71□□□□□ -2.14
CLDN1O95832 Y_RNA.26-201ENST00000362539 101 ntBASIC1.71□□□□□ -2.14
CLDN1O95832 Y_RNA.101-201ENST00000363154 102 ntBASIC1.71□□□□□ -2.14
CLDN1O95832 RNU6-770P-201ENST00000363929 105 ntBASIC1.71□□□□□ -2.14
CLDN1O95832 SNORD115-30-201ENST00000364117 82 ntBASIC1.71□□□□□ -2.14
CLDN1O95832 Y_RNA.459-201ENST00000384251 102 ntBASIC1.71□□□□□ -2.14
CLDN1O95832 RNU6-937P-201ENST00000384325 106 ntBASIC1.71□□□□□ -2.14
CLDN1O95832 Y_RNA.518-201ENST00000384552 113 ntBASIC1.71□□□□□ -2.14
CLDN1O95832 MIR518A2-201ENST00000384966 87 ntBASIC1.71□□□□□ -2.14
CLDN1O95832 Y_RNA.581-201ENST00000391017 97 ntBASIC1.71□□□□□ -2.14
CLDN1O95832 RNA5SP338-201ENST00000410495 85 ntBASIC1.71□□□□□ -2.14
CLDN1O95832 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.71□□□□□ -2.14
CLDN1O95832 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.71□□□□□ -2.14
CLDN1O95832 SUMO1P2-201ENST00000452524 304 ntBASIC1.71□□□□□ -2.14
CLDN1O95832 MTATP8P1-201ENST00000467115 207 ntBASIC1.71□□□□□ -2.14
CLDN1O95832 MTCO2P24-201ENST00000515611 426 ntBASIC1.71□□□□□ -2.14
CLDN1O95832 RNU6-966P-201ENST00000516479 104 ntBASIC1.71□□□□□ -2.14
CLDN1O95832 RNU6-107P-201ENST00000516643 102 ntBASIC1.71□□□□□ -2.14
CLDN1O95832 SNORA40.15-201ENST00000516884 107 ntBASIC1.71□□□□□ -2.14
CLDN1O95832 SUMO2P18-201ENST00000518873 252 ntBASIC1.71□□□□□ -2.14
CLDN1O95832 MIR4287-201ENST00000579398 78 ntBASIC1.71□□□□□ -2.14
CLDN1O95832 AC078899.2-201ENST00000595282 212 ntBASIC1.71□□□□□ -2.14
CLDN1O95832 AL162730.1-201ENST00000605734 292 ntBASIC1.71□□□□□ -2.14
CLDN1O95832 MIR8081-201ENST00000611533 95 ntBASIC1.71□□□□□ -2.14
CLDN1O95832 AC004467.1-201ENST00000615678 330 ntBASIC1.71□□□□□ -2.14
CLDN1O95832 MIR376A1-201ENST00000616574 68 ntBASIC1.71□□□□□ -2.14
CLDN1O95832 AL590240.4-201ENST00000616908 390 ntBASIC1.71□□□□□ -2.14
CLDN1O95832 uc_338.20-201ENST00000621563 178 ntBASIC1.71□□□□□ -2.14
CLDN1O95832 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
CLDN1O95832 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.71□□□□□ -2.14
CLDN1O95832 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
CLDN1O95832 SNORD114-7-201ENST00000362520 77 ntBASIC1.7□□□□□ -2.14
CLDN1O95832 RNA5SP493-201ENST00000364115 91 ntBASIC1.7□□□□□ -2.14
CLDN1O95832 Y_RNA.222-201ENST00000364264 102 ntBASIC1.7□□□□□ -2.14
CLDN1O95832 RNU6-806P-201ENST00000365147 105 ntBASIC1.7□□□□□ -2.14
CLDN1O95832 RNU6-1175P-201ENST00000365200 107 ntBASIC1.7□□□□□ -2.14
CLDN1O95832 Y_RNA.574-201ENST00000384766 95 ntBASIC1.7□□□□□ -2.14
CLDN1O95832 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
CLDN1O95832 RNA5SP465-201ENST00000391195 109 ntBASIC1.7□□□□□ -2.14
CLDN1O95832 AL117342.1-201ENST00000404861 406 ntBASIC1.7□□□□□ -2.14
CLDN1O95832 MIR1276-201ENST00000408707 83 ntBASIC1.7□□□□□ -2.14
CLDN1O95832 RNA5SP475-201ENST00000410568 110 ntBASIC1.7□□□□□ -2.14
CLDN1O95832 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.7□□□□□ -2.14
CLDN1O95832 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.7□□□□□ -2.14
CLDN1O95832 AC060773.1-201ENST00000421698 310 ntBASIC1.7□□□□□ -2.14
CLDN1O95832 MTCYBP9-201ENST00000431021 303 ntBASIC1.7□□□□□ -2.14
CLDN1O95832 RNA5SP233-201ENST00000459153 113 ntBASIC1.7□□□□□ -2.14
CLDN1O95832 RNU6-496P-201ENST00000516145 99 ntBASIC1.7□□□□□ -2.14
CLDN1O95832 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.7□□□□□ -2.14
CLDN1O95832 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.7□□□□□ -2.14
CLDN1O95832 DNAJC19P9-201ENST00000555084 351 ntBASIC1.7□□□□□ -2.14
CLDN1O95832 MIR4529-201ENST00000578110 78 ntBASIC1.7□□□□□ -2.14
CLDN1O95832 AC084768.2-201ENST00000622736 221 ntBASIC1.7□□□□□ -2.14
CLDN1O95832 AC006435.5-201ENST00000624486 112 ntBASIC1.7□□□□□ -2.14
CLDN1O95832 U6.115-201ENST00000636045 103 ntBASIC1.7□□□□□ -2.14
CLDN1O95832 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
CLDN1O95832 Y_RNA.19-201ENST00000362462 99 ntBASIC1.69□□□□□ -2.14
CLDN1O95832 RNU6-1309P-201ENST00000363305 108 ntBASIC1.69□□□□□ -2.14
CLDN1O95832 Y_RNA.446-201ENST00000384178 104 ntBASIC1.69□□□□□ -2.14
CLDN1O95832 MIR676-201ENST00000390702 67 ntBASIC1.69□□□□□ -2.14
CLDN1O95832 MTND3P2-201ENST00000438452 342 ntBASIC1.69□□□□□ -2.14
CLDN1O95832 AC005042.3-201ENST00000453230 174 ntBASIC1.69□□□□□ -2.14
CLDN1O95832 HSPE1P25-201ENST00000455484 251 ntBASIC1.69□□□□□ -2.14
CLDN1O95832 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.69□□□□□ -2.14
CLDN1O95832 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.69□□□□□ -2.14
CLDN1O95832 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms