Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 MIR218-1-201ENST00000384999 110 ntBASIC3.1□□□□□ -1.91
VAMP4O75379 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
VAMP4O75379 SUMO1P4-201ENST00000429430 302 ntBASIC3.1□□□□□ -1.91
VAMP4O75379 AL161788.1-201ENST00000441805 169 ntBASIC3.1□□□□□ -1.91
VAMP4O75379 RNU7-141P-201ENST00000459304 62 ntBASIC3.1□□□□□ -1.91
VAMP4O75379 RNU6-498P-201ENST00000459468 107 ntBASIC3.1□□□□□ -1.91
VAMP4O75379 RPL36AP21-201ENST00000490372 323 ntBASIC3.1□□□□□ -1.91
VAMP4O75379 AC026436.1-201ENST00000510537 270 ntBASIC3.1□□□□□ -1.91
VAMP4O75379 MTND5P41-201ENST00000517498 206 ntBASIC3.1□□□□□ -1.91
VAMP4O75379 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.1□□□□□ -1.91
VAMP4O75379 MIR3117-201ENST00000584034 78 ntBASIC3.1□□□□□ -1.91
VAMP4O75379 AC103810.6-201ENST00000606708 136 ntBASIC3.1□□□□□ -1.91
VAMP4O75379 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.1□□□□□ -1.91
VAMP4O75379 Y_RNA.802-201ENST00000614892 130 ntBASIC3.1□□□□□ -1.91
VAMP4O75379 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
VAMP4O75379 Y_RNA.8-201ENST00000362353 102 ntBASIC3.09□□□□□ -1.91
VAMP4O75379 Y_RNA.182-201ENST00000363880 111 ntBASIC3.09□□□□□ -1.91
VAMP4O75379 SNORA25.6-201ENST00000364121 118 ntBASIC3.09□□□□□ -1.91
VAMP4O75379 Y_RNA.293-201ENST00000364908 93 ntBASIC3.09□□□□□ -1.91
VAMP4O75379 RNU6-275P-201ENST00000364910 107 ntBASIC3.09□□□□□ -1.91
VAMP4O75379 RNU6-546P-201ENST00000383991 107 ntBASIC3.09□□□□□ -1.91
VAMP4O75379 SNORA19-201ENST00000384737 128 ntBASIC3.09□□□□□ -1.91
VAMP4O75379 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.09□□□□□ -1.91
VAMP4O75379 RPS12P2-201ENST00000439728 269 ntBASIC3.09□□□□□ -1.91
VAMP4O75379 HMGN2P18-201ENST00000450680 270 ntBASIC3.09□□□□□ -1.91
VAMP4O75379 CYP2C59P-201ENST00000457790 269 ntBASIC3.09□□□□□ -1.91
VAMP4O75379 AC090515.1-201ENST00000465295 476 ntBASIC3.09□□□□□ -1.91
VAMP4O75379 RNU2-34P-201ENST00000516534 121 ntBASIC3.09□□□□□ -1.91
VAMP4O75379 AC022616.8-201ENST00000533569 253 ntBASIC3.09□□□□□ -1.91
VAMP4O75379 MIR4744-201ENST00000581563 82 ntBASIC3.09□□□□□ -1.91
VAMP4O75379 AC067747.1-201ENST00000608026 250 ntBASIC3.09□□□□□ -1.91
VAMP4O75379 AC006435.5-201ENST00000624486 112 ntBASIC3.09□□□□□ -1.91
VAMP4O75379 MIR1291-201ENST00000627649 87 ntBASIC3.09□□□□□ -1.91
VAMP4O75379 MIR1248-201ENST00000629190 106 ntBASIC3.09□□□□□ -1.91
VAMP4O75379 AC132825.6-201ENST00000638861 357 ntBASIC3.09□□□□□ -1.91
VAMP4O75379 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.91
VAMP4O75379 AC080128.1-201ENST00000474389 1917 ntBASIC3.09□□□□□ -1.92
VAMP4O75379 RNU6-704P-201ENST00000364162 103 ntBASIC3.08□□□□□ -1.92
VAMP4O75379 RNU4-84P-201ENST00000364200 139 ntBASIC3.08□□□□□ -1.92
VAMP4O75379 SNORD113-1-201ENST00000365321 69 ntBASIC3.08□□□□□ -1.92
VAMP4O75379 RNA5SP240-201ENST00000365355 128 ntBASIC3.08□□□□□ -1.92
VAMP4O75379 RNU6-438P-201ENST00000365561 103 ntBASIC3.08□□□□□ -1.92
VAMP4O75379 SNORD14D-201ENST00000384390 87 ntBASIC3.08□□□□□ -1.92
VAMP4O75379 EBAG9P1-201ENST00000418955 543 ntBASIC3.08□□□□□ -1.92
VAMP4O75379 AL445687.1-201ENST00000439946 251 ntBASIC3.08□□□□□ -1.92
VAMP4O75379 TMSB4XP3-201ENST00000445144 114 ntBASIC3.08□□□□□ -1.92
VAMP4O75379 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.08□□□□□ -1.92
VAMP4O75379 AC025647.1-201ENST00000517879 253 ntBASIC3.08□□□□□ -1.92
VAMP4O75379 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.08□□□□□ -1.92
VAMP4O75379 AC090616.3-201ENST00000582184 217 ntBASIC3.08□□□□□ -1.92
VAMP4O75379 AL356280.1-201ENST00000603614 379 ntBASIC3.08□□□□□ -1.92
VAMP4O75379 MTND1P7-201ENST00000632801 297 ntBASIC3.08□□□□□ -1.92
VAMP4O75379 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
VAMP4O75379 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.08□□□□□ -1.92
VAMP4O75379 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
VAMP4O75379 Y_RNA.124-201ENST00000363339 93 ntBASIC3.07□□□□□ -1.92
VAMP4O75379 RNU6-1205P-201ENST00000363625 106 ntBASIC3.07□□□□□ -1.92
VAMP4O75379 RNU6-461P-201ENST00000364195 107 ntBASIC3.07□□□□□ -1.92
VAMP4O75379 snoU2_19.4-201ENST00000364329 80 ntBASIC3.07□□□□□ -1.92
VAMP4O75379 Y_RNA.357-201ENST00000365487 109 ntBASIC3.07□□□□□ -1.92
VAMP4O75379 RNU6-57P-201ENST00000411348 103 ntBASIC3.07□□□□□ -1.92
VAMP4O75379 RPL39P40-201ENST00000445481 146 ntBASIC3.07□□□□□ -1.92
VAMP4O75379 RN7SL636P-201ENST00000497504 294 ntBASIC3.07□□□□□ -1.92
VAMP4O75379 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.07□□□□□ -1.92
VAMP4O75379 Y_RNA.797-201ENST00000515977 94 ntBASIC3.07□□□□□ -1.92
VAMP4O75379 RNU6-346P-201ENST00000516288 111 ntBASIC3.07□□□□□ -1.92
VAMP4O75379 RNU7-115P-201ENST00000516433 55 ntBASIC3.07□□□□□ -1.92
VAMP4O75379 RNU6-1337P-201ENST00000516525 95 ntBASIC3.07□□□□□ -1.92
VAMP4O75379 MIR5194-201ENST00000582634 120 ntBASIC3.07□□□□□ -1.92
VAMP4O75379 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
VAMP4O75379 Y_RNA.172-201ENST00000363765 102 ntBASIC3.06□□□□□ -1.92
VAMP4O75379 RNU6-1323P-201ENST00000384025 107 ntBASIC3.06□□□□□ -1.92
VAMP4O75379 RNU6-578P-201ENST00000390980 103 ntBASIC3.06□□□□□ -1.92
VAMP4O75379 RNU2-32P-201ENST00000411193 191 ntBASIC3.06□□□□□ -1.92
VAMP4O75379 AC008134.1-201ENST00000420943 193 ntBASIC3.06□□□□□ -1.92
VAMP4O75379 AC018634.1-201ENST00000437554 401 ntBASIC3.06□□□□□ -1.92
VAMP4O75379 AC016717.1-201ENST00000448918 286 ntBASIC3.06□□□□□ -1.92
VAMP4O75379 RPS26P55-201ENST00000471178 356 ntBASIC3.06□□□□□ -1.92
VAMP4O75379 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.06□□□□□ -1.92
VAMP4O75379 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.06□□□□□ -1.92
VAMP4O75379 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.06□□□□□ -1.92
VAMP4O75379 AC004832.4-201ENST00000608952 331 ntBASIC3.06□□□□□ -1.92
VAMP4O75379 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.06□□□□□ -1.92
VAMP4O75379 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.06□□□□□ -1.92
VAMP4O75379 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.06□□□□□ -1.92
VAMP4O75379 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
VAMP4O75379 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
VAMP4O75379 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
VAMP4O75379 Y_RNA.24-201ENST00000362508 103 ntBASIC3.05□□□□□ -1.92
VAMP4O75379 RNU4-10P-201ENST00000364383 140 ntBASIC3.05□□□□□ -1.92
VAMP4O75379 U8.7-201ENST00000364940 136 ntBASIC3.05□□□□□ -1.92
VAMP4O75379 MIR616-201ENST00000385293 97 ntBASIC3.05□□□□□ -1.92
VAMP4O75379 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
VAMP4O75379 AC010154.1-201ENST00000425857 269 ntBASIC3.05□□□□□ -1.92
VAMP4O75379 CR769767.1-201ENST00000436337 346 ntBASIC3.05□□□□□ -1.92
VAMP4O75379 AC104389.3-201ENST00000445629 235 ntBASIC3.05□□□□□ -1.92
VAMP4O75379 AC234781.5-201ENST00000508429 271 ntBASIC3.05□□□□□ -1.92
VAMP4O75379 RNU6-965P-201ENST00000516721 96 ntBASIC3.05□□□□□ -1.92
VAMP4O75379 SNORA48.11-201ENST00000517015 89 ntBASIC3.05□□□□□ -1.92
VAMP4O75379 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 157.1 ms