Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.41□□□□□ -2.02
PRPF3O43395 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
PRPF3O43395 SNORA27.1-201ENST00000362604 124 ntBASIC2.4□□□□□ -2.03
PRPF3O43395 RNU6-862P-201ENST00000362804 105 ntBASIC2.4□□□□□ -2.03
PRPF3O43395 SNORA20B-201ENST00000384220 132 ntBASIC2.4□□□□□ -2.03
PRPF3O43395 Y_RNA.602-201ENST00000410535 92 ntBASIC2.4□□□□□ -2.03
PRPF3O43395 RNU6-1199P-201ENST00000411249 104 ntBASIC2.4□□□□□ -2.03
PRPF3O43395 RPL21P38-201ENST00000418090 167 ntBASIC2.4□□□□□ -2.03
PRPF3O43395 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.4□□□□□ -2.03
PRPF3O43395 HSPE1P13-201ENST00000451143 297 ntBASIC2.4□□□□□ -2.03
PRPF3O43395 RNU7-99P-201ENST00000516271 62 ntBASIC2.4□□□□□ -2.03
PRPF3O43395 RNU6-966P-201ENST00000516479 104 ntBASIC2.4□□□□□ -2.03
PRPF3O43395 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.4□□□□□ -2.03
PRPF3O43395 SUB1P4-201ENST00000566062 339 ntBASIC2.4□□□□□ -2.03
PRPF3O43395 MIR4287-201ENST00000579398 78 ntBASIC2.4□□□□□ -2.03
PRPF3O43395 MIR6840-201ENST00000611937 71 ntBASIC2.4□□□□□ -2.03
PRPF3O43395 ZNF702P-202ENST00000434269 1966 ntBASIC2.4□□□□□ -2.03
PRPF3O43395 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.39□□□□□ -2.03
PRPF3O43395 Y_RNA.47-201ENST00000362697 108 ntBASIC2.39□□□□□ -2.03
PRPF3O43395 SNORD115-30-201ENST00000364117 82 ntBASIC2.39□□□□□ -2.03
PRPF3O43395 Y_RNA.222-201ENST00000364264 102 ntBASIC2.39□□□□□ -2.03
PRPF3O43395 Y_RNA.287-201ENST00000364853 94 ntBASIC2.39□□□□□ -2.03
PRPF3O43395 Y_RNA.512-201ENST00000384518 102 ntBASIC2.39□□□□□ -2.03
PRPF3O43395 SNORA8-201ENST00000384574 139 ntBASIC2.39□□□□□ -2.03
PRPF3O43395 RNU6-950P-201ENST00000384651 107 ntBASIC2.39□□□□□ -2.03
PRPF3O43395 RNU6-417P-201ENST00000384712 107 ntBASIC2.39□□□□□ -2.03
PRPF3O43395 MIR17-201ENST00000385012 84 ntBASIC2.39□□□□□ -2.03
PRPF3O43395 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
PRPF3O43395 RNA5SP323-201ENST00000391094 133 ntBASIC2.39□□□□□ -2.03
PRPF3O43395 MTND3P2-201ENST00000438452 342 ntBASIC2.39□□□□□ -2.03
PRPF3O43395 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.39□□□□□ -2.03
PRPF3O43395 RPL23AP3-201ENST00000453844 468 ntBASIC2.39□□□□□ -2.03
PRPF3O43395 AC098869.1-201ENST00000481627 292 ntBASIC2.39□□□□□ -2.03
PRPF3O43395 RNU6-1278P-201ENST00000516130 107 ntBASIC2.39□□□□□ -2.03
PRPF3O43395 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.39□□□□□ -2.03
PRPF3O43395 DEFB122-202ENST00000569013 197 ntBASIC2.39□□□□□ -2.03
PRPF3O43395 MIR4438-201ENST00000585271 93 ntBASIC2.39□□□□□ -2.03
PRPF3O43395 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.39□□□□□ -2.03
PRPF3O43395 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.39□□□□□ -2.03
PRPF3O43395 AC022513.1-201ENST00000624512 117 ntBASIC2.39□□□□□ -2.03
PRPF3O43395 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.39□□□□□ -2.03
PRPF3O43395 AC092881.1-201ENST00000638218 2733 ntBASIC2.39□□□□□ -2.03
PRPF3O43395 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.38□□□□□ -2.03
PRPF3O43395 RNA5SP37-201ENST00000365420 130 ntBASIC2.38□□□□□ -2.03
PRPF3O43395 MIR520A-201ENST00000384862 85 ntBASIC2.38□□□□□ -2.03
PRPF3O43395 AL139156.1-201ENST00000412785 841 ntBASIC2.38□□□□□ -2.03
PRPF3O43395 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
PRPF3O43395 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.38□□□□□ -2.03
PRPF3O43395 snoU13.23-201ENST00000458863 104 ntBASIC2.38□□□□□ -2.03
PRPF3O43395 RPS27P22-201ENST00000478056 241 ntBASIC2.38□□□□□ -2.03
PRPF3O43395 HMGB3P17-201ENST00000504195 649 ntBASIC2.38□□□□□ -2.03
PRPF3O43395 MTCO2P24-201ENST00000515611 426 ntBASIC2.38□□□□□ -2.03
PRPF3O43395 RNA5SP481-201ENST00000516814 122 ntBASIC2.38□□□□□ -2.03
PRPF3O43395 AC027419.1-201ENST00000522976 328 ntBASIC2.38□□□□□ -2.03
PRPF3O43395 RPL21P9-201ENST00000556149 474 ntBASIC2.38□□□□□ -2.03
PRPF3O43395 AC010615.1-201ENST00000594254 1764 ntBASIC2.38□□□□□ -2.03
PRPF3O43395 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.37□□□□□ -2.03
PRPF3O43395 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.37□□□□□ -2.03
PRPF3O43395 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
PRPF3O43395 RNU6-324P-201ENST00000363957 106 ntBASIC2.37□□□□□ -2.03
PRPF3O43395 Y_RNA.286-201ENST00000364813 102 ntBASIC2.37□□□□□ -2.03
PRPF3O43395 RNU6-102P-201ENST00000384485 104 ntBASIC2.37□□□□□ -2.03
PRPF3O43395 Y_RNA.581-201ENST00000391017 97 ntBASIC2.37□□□□□ -2.03
PRPF3O43395 AL355796.1-201ENST00000406706 323 ntBASIC2.37□□□□□ -2.03
PRPF3O43395 U3.40-201ENST00000408706 208 ntBASIC2.37□□□□□ -2.03
PRPF3O43395 RNU2-2P-201ENST00000410396 191 ntBASIC2.37□□□□□ -2.03
PRPF3O43395 AC009310.1-201ENST00000414414 451 ntBASIC2.37□□□□□ -2.03
PRPF3O43395 MTCYBP9-201ENST00000431021 303 ntBASIC2.37□□□□□ -2.03
PRPF3O43395 AL445646.1-201ENST00000431784 216 ntBASIC2.37□□□□□ -2.03
PRPF3O43395 FTH1P12-201ENST00000432137 551 ntBASIC2.37□□□□□ -2.03
PRPF3O43395 AC099677.2-201ENST00000436385 175 ntBASIC2.37□□□□□ -2.03
PRPF3O43395 RPL23AP7-203ENST00000449021 469 ntBASIC2.37□□□□□ -2.03
PRPF3O43395 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.37□□□□□ -2.03
PRPF3O43395 RPS29P21-201ENST00000496272 170 ntBASIC2.37□□□□□ -2.03
PRPF3O43395 RNA5SP20-201ENST00000515976 84 ntBASIC2.37□□□□□ -2.03
PRPF3O43395 RNU6-496P-201ENST00000516145 99 ntBASIC2.37□□□□□ -2.03
PRPF3O43395 MIR5094-201ENST00000578766 85 ntBASIC2.37□□□□□ -2.03
PRPF3O43395 MIR4648-201ENST00000580107 72 ntBASIC2.37□□□□□ -2.03
PRPF3O43395 AL773524.1-201ENST00000614065 229 ntBASIC2.37□□□□□ -2.03
PRPF3O43395 RNU4-90P-201ENST00000362773 141 ntBASIC2.36□□□□□ -2.03
PRPF3O43395 snoU2_19.2-201ENST00000363024 80 ntBASIC2.36□□□□□ -2.03
PRPF3O43395 MIR215-201ENST00000384858 110 ntBASIC2.36□□□□□ -2.03
PRPF3O43395 AL031003.1-201ENST00000404229 172 ntBASIC2.36□□□□□ -2.03
PRPF3O43395 AC244636.1-201ENST00000421152 228 ntBASIC2.36□□□□□ -2.03
PRPF3O43395 AC096920.1-201ENST00000423991 241 ntBASIC2.36□□□□□ -2.03
PRPF3O43395 RPL23AP6-201ENST00000446637 472 ntBASIC2.36□□□□□ -2.03
PRPF3O43395 AL021397.1-201ENST00000451806 248 ntBASIC2.36□□□□□ -2.03
PRPF3O43395 HSPE1P25-201ENST00000455484 251 ntBASIC2.36□□□□□ -2.03
PRPF3O43395 AC025033.1-201ENST00000463883 194 ntBASIC2.36□□□□□ -2.03
PRPF3O43395 RPS26P55-201ENST00000471178 356 ntBASIC2.36□□□□□ -2.03
PRPF3O43395 RPS26P45-201ENST00000471748 340 ntBASIC2.36□□□□□ -2.03
PRPF3O43395 HMGN1P10-201ENST00000474557 553 ntBASIC2.36□□□□□ -2.03
PRPF3O43395 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.36□□□□□ -2.03
PRPF3O43395 AC010900.2-201ENST00000604508 210 ntBASIC2.36□□□□□ -2.03
PRPF3O43395 MIR8062-201ENST00000621515 85 ntBASIC2.36□□□□□ -2.03
PRPF3O43395 AP000553.5-201ENST00000641933 54 ntBASIC2.36□□□□□ -2.03
PRPF3O43395 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
PRPF3O43395 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
PRPF3O43395 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PRPF3O43395 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms