Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXA2O43364 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXA2O43364 AC093908.1-201ENST00000623125 8092 ntBASIC3.95□□□□□ -1.78
HOXA2O43364 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXA2O43364 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.94□□□□□ -1.78
HOXA2O43364 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXA2O43364 Y_RNA.220-201ENST00000364244 109 ntBASIC3.94□□□□□ -1.78
HOXA2O43364 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.94□□□□□ -1.78
HOXA2O43364 RNU7-70P-201ENST00000516941 66 ntBASIC3.94□□□□□ -1.78
HOXA2O43364 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXA2O43364 MIR5009-201ENST00000578736 100 ntBASIC3.94□□□□□ -1.78
HOXA2O43364 MIR376A2-201ENST00000636782 80 ntBASIC3.94□□□□□ -1.78
HOXA2O43364 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HOXA2O43364 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXA2O43364 AL596211.1-201ENST00000569873 2277 ntBASIC3.93□□□□□ -1.78
HOXA2O43364 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HOXA2O43364 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
HOXA2O43364 SNORA2.2-201ENST00000365473 135 ntBASIC3.93□□□□□ -1.78
HOXA2O43364 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.93□□□□□ -1.78
HOXA2O43364 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.93□□□□□ -1.78
HOXA2O43364 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.93□□□□□ -1.78
HOXA2O43364 AC004486.1-201ENST00000546846 233 ntBASIC3.93□□□□□ -1.78
HOXA2O43364 SNORA50A-202ENST00000629536 136 ntBASIC3.93□□□□□ -1.78
HOXA2O43364 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HOXA2O43364 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HOXA2O43364 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
HOXA2O43364 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HOXA2O43364 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.93□□□□□ -1.78
HOXA2O43364 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HOXA2O43364 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.92□□□□□ -1.78
HOXA2O43364 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HOXA2O43364 RNU6-1189P-201ENST00000383958 107 ntBASIC3.92□□□□□ -1.78
HOXA2O43364 MIR548O-201ENST00000408583 114 ntBASIC3.92□□□□□ -1.78
HOXA2O43364 FTH1P12-201ENST00000432137 551 ntBASIC3.92□□□□□ -1.78
HOXA2O43364 AC006483.1-201ENST00000487308 313 ntBASIC3.92□□□□□ -1.78
HOXA2O43364 AC068339.1-201ENST00000526965 141 ntBASIC3.92□□□□□ -1.78
HOXA2O43364 AP003355.3-201ENST00000623465 114 ntBASIC3.92□□□□□ -1.78
HOXA2O43364 MIR2052-201ENST00000636055 55 ntBASIC3.92□□□□□ -1.78
HOXA2O43364 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.92□□□□□ -1.78
HOXA2O43364 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HOXA2O43364 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HOXA2O43364 MIR488-201ENST00000365739 83 ntBASIC3.91□□□□□ -1.78
HOXA2O43364 MIR590-201ENST00000385008 97 ntBASIC3.91□□□□□ -1.78
HOXA2O43364 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
HOXA2O43364 RNU6-1328P-201ENST00000410938 106 ntBASIC3.91□□□□□ -1.78
HOXA2O43364 AL357552.1-201ENST00000445254 415 ntBASIC3.91□□□□□ -1.78
HOXA2O43364 RPS29P12-201ENST00000460178 152 ntBASIC3.91□□□□□ -1.78
HOXA2O43364 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.91□□□□□ -1.78
HOXA2O43364 RNU1-142P-201ENST00000516682 145 ntBASIC3.91□□□□□ -1.78
HOXA2O43364 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.91□□□□□ -1.78
HOXA2O43364 AC091544.4-201ENST00000555268 342 ntBASIC3.91□□□□□ -1.78
HOXA2O43364 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.91□□□□□ -1.78
HOXA2O43364 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.91□□□□□ -1.78
HOXA2O43364 AC021443.1-201ENST00000604478 211 ntBASIC3.91□□□□□ -1.78
HOXA2O43364 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.91□□□□□ -1.78
HOXA2O43364 MIR7515-201ENST00000637837 67 ntBASIC3.91□□□□□ -1.78
HOXA2O43364 ZNF720P1-201ENST00000562403 1939 ntBASIC3.91□□□□□ -1.78
HOXA2O43364 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HOXA2O43364 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.9□□□□□ -1.78
HOXA2O43364 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
HOXA2O43364 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.9□□□□□ -1.79
HOXA2O43364 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HOXA2O43364 MIR340-201ENST00000362125 95 ntBASIC3.9□□□□□ -1.79
HOXA2O43364 RNU1-23P-201ENST00000363361 144 ntBASIC3.9□□□□□ -1.79
HOXA2O43364 RNU1-33P-201ENST00000364249 162 ntBASIC3.9□□□□□ -1.79
HOXA2O43364 MIR522-201ENST00000385071 87 ntBASIC3.9□□□□□ -1.79
HOXA2O43364 MIR95-201ENST00000385072 81 ntBASIC3.9□□□□□ -1.79
HOXA2O43364 AC004552.1-201ENST00000419089 348 ntBASIC3.9□□□□□ -1.79
HOXA2O43364 RPS26P3-201ENST00000470205 348 ntBASIC3.9□□□□□ -1.79
HOXA2O43364 AC090543.2-201ENST00000483963 348 ntBASIC3.9□□□□□ -1.79
HOXA2O43364 AC004057.1-201ENST00000485827 348 ntBASIC3.9□□□□□ -1.79
HOXA2O43364 RN7SKP209-201ENST00000516888 304 ntBASIC3.9□□□□□ -1.79
HOXA2O43364 SNORA48.11-201ENST00000517015 89 ntBASIC3.9□□□□□ -1.79
HOXA2O43364 RNU6-158P-201ENST00000517104 100 ntBASIC3.9□□□□□ -1.79
HOXA2O43364 AP002004.2-201ENST00000531656 154 ntBASIC3.9□□□□□ -1.79
HOXA2O43364 AC008011.1-201ENST00000545989 227 ntBASIC3.9□□□□□ -1.79
HOXA2O43364 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HOXA2O43364 AL442128.1-201ENST00000615151 90 ntBASIC3.9□□□□□ -1.79
HOXA2O43364 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.9□□□□□ -1.79
HOXA2O43364 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HOXA2O43364 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
HOXA2O43364 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HOXA2O43364 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.9□□□□□ -1.79
HOXA2O43364 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.9□□□□□ -1.79
HOXA2O43364 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HOXA2O43364 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
HOXA2O43364 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HOXA2O43364 Y_RNA.78-201ENST00000362970 110 ntBASIC3.89□□□□□ -1.79
HOXA2O43364 RNU6-442P-201ENST00000383968 104 ntBASIC3.89□□□□□ -1.79
HOXA2O43364 MIR490-201ENST00000384865 128 ntBASIC3.89□□□□□ -1.79
HOXA2O43364 RNA5SP467-201ENST00000391274 118 ntBASIC3.89□□□□□ -1.79
HOXA2O43364 U8.17-201ENST00000391292 132 ntBASIC3.89□□□□□ -1.79
HOXA2O43364 AL353689.1-201ENST00000438895 199 ntBASIC3.89□□□□□ -1.79
HOXA2O43364 TRBV12-2-201ENST00000489763 344 ntBASIC3.89□□□□□ -1.79
HOXA2O43364 RNU6-830P-201ENST00000516353 107 ntBASIC3.89□□□□□ -1.79
HOXA2O43364 RNU6-109P-201ENST00000516364 107 ntBASIC3.89□□□□□ -1.79
HOXA2O43364 RNU6-184P-201ENST00000516514 107 ntBASIC3.89□□□□□ -1.79
HOXA2O43364 AP003327.1-201ENST00000529684 127 ntBASIC3.89□□□□□ -1.79
HOXA2O43364 MIR3186-201ENST00000577404 85 ntBASIC3.89□□□□□ -1.79
HOXA2O43364 MIR3200-201ENST00000580767 85 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms