Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.62□□□□□ -2.15
O00370 Y_RNA.4-201ENST00000362333 112 ntBASIC1.62□□□□□ -2.15
O00370 RNU6-112P-201ENST00000363599 104 ntBASIC1.62□□□□□ -2.15
O00370 RNU6-324P-201ENST00000363957 106 ntBASIC1.62□□□□□ -2.15
O00370 RNU6-1019P-201ENST00000364424 107 ntBASIC1.62□□□□□ -2.15
O00370 Y_RNA.238-201ENST00000364441 102 ntBASIC1.62□□□□□ -2.15
O00370 RNU6-450P-201ENST00000364654 107 ntBASIC1.62□□□□□ -2.15
O00370 RNU6-338P-201ENST00000383888 105 ntBASIC1.62□□□□□ -2.15
O00370 RNU6-20P-201ENST00000384106 107 ntBASIC1.62□□□□□ -2.15
O00370 SNORA20B-201ENST00000384220 132 ntBASIC1.62□□□□□ -2.15
O00370 RNU6-474P-201ENST00000384243 107 ntBASIC1.62□□□□□ -2.15
O00370 MIR520A-201ENST00000384862 85 ntBASIC1.62□□□□□ -2.15
O00370 RPL23AP36-201ENST00000413895 458 ntBASIC1.62□□□□□ -2.15
O00370 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.62□□□□□ -2.15
O00370 snoU13.9-201ENST00000458927 103 ntBASIC1.62□□□□□ -2.15
O00370 Y_RNA.639-201ENST00000458981 102 ntBASIC1.62□□□□□ -2.15
O00370 Y_RNA.631-201ENST00000459607 101 ntBASIC1.62□□□□□ -2.15
O00370 AC108729.3-201ENST00000513484 108 ntBASIC1.62□□□□□ -2.15
O00370 RNU6-1012P-201ENST00000516606 109 ntBASIC1.62□□□□□ -2.15
O00370 RNU6-1153P-201ENST00000516760 105 ntBASIC1.62□□□□□ -2.15
O00370 RNA5SP437-201ENST00000517249 129 ntBASIC1.62□□□□□ -2.15
O00370 AC040926.1-201ENST00000530195 238 ntBASIC1.62□□□□□ -2.15
O00370 SUB1P4-201ENST00000566062 339 ntBASIC1.62□□□□□ -2.15
O00370 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.62□□□□□ -2.15
O00370 AL390123.1-201ENST00000603216 237 ntBASIC1.62□□□□□ -2.15
O00370 AC091925.1-201ENST00000623204 462 ntBASIC1.62□□□□□ -2.15
O00370 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.62□□□□□ -2.15
O00370 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.62□□□□□ -2.15
O00370 AC005592.1-201ENST00000566527 1640 ntBASIC1.62□□□□□ -2.15
O00370 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
O00370 Y_RNA.112-201ENST00000363250 102 ntBASIC1.61□□□□□ -2.15
O00370 RNU6-626P-201ENST00000363354 107 ntBASIC1.61□□□□□ -2.15
O00370 RNU6-414P-201ENST00000363705 104 ntBASIC1.61□□□□□ -2.15
O00370 Y_RNA.216-201ENST00000364205 93 ntBASIC1.61□□□□□ -2.15
O00370 RNU6-454P-201ENST00000364292 107 ntBASIC1.61□□□□□ -2.15
O00370 RNA5SP109-201ENST00000391010 116 ntBASIC1.61□□□□□ -2.15
O00370 SNORA67.5-201ENST00000391036 107 ntBASIC1.61□□□□□ -2.15
O00370 AL355796.1-201ENST00000406706 323 ntBASIC1.61□□□□□ -2.15
O00370 EBAG9P1-201ENST00000418955 543 ntBASIC1.61□□□□□ -2.15
O00370 SDAD1P3-201ENST00000427380 333 ntBASIC1.61□□□□□ -2.15
O00370 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.61□□□□□ -2.15
O00370 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.61□□□□□ -2.15
O00370 AC073910.1-201ENST00000445047 438 ntBASIC1.61□□□□□ -2.15
O00370 MTND4P19-201ENST00000446659 478 ntBASIC1.61□□□□□ -2.15
O00370 MRPS10P1-201ENST00000448483 130 ntBASIC1.61□□□□□ -2.15
O00370 RNU7-34P-201ENST00000459394 64 ntBASIC1.61□□□□□ -2.15
O00370 RPL26P26-201ENST00000480251 434 ntBASIC1.61□□□□□ -2.15
O00370 AL163195.1-201ENST00000496941 348 ntBASIC1.61□□□□□ -2.15
O00370 AC025465.3-201ENST00000510570 311 ntBASIC1.61□□□□□ -2.15
O00370 RNU6-155P-201ENST00000516347 100 ntBASIC1.61□□□□□ -2.15
O00370 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.61□□□□□ -2.15
O00370 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.61□□□□□ -2.15
O00370 Y_RNA.124-201ENST00000363339 93 ntBASIC1.6□□□□□ -2.15
O00370 Y_RNA.148-201ENST00000363557 117 ntBASIC1.6□□□□□ -2.15
O00370 RNU6-60P-201ENST00000364792 103 ntBASIC1.6□□□□□ -2.15
O00370 SNORD14.1-201ENST00000365609 90 ntBASIC1.6□□□□□ -2.15
O00370 RNU6-1310P-201ENST00000384153 107 ntBASIC1.6□□□□□ -2.15
O00370 Y_RNA.471-201ENST00000384312 102 ntBASIC1.6□□□□□ -2.15
O00370 MIR515-2-201ENST00000384883 83 ntBASIC1.6□□□□□ -2.15
O00370 MIR515-1-201ENST00000384884 83 ntBASIC1.6□□□□□ -2.15
O00370 MIR517C-201ENST00000385103 95 ntBASIC1.6□□□□□ -2.15
O00370 MIR548P-201ENST00000408336 84 ntBASIC1.6□□□□□ -2.15
O00370 PMCHL1-202ENST00000423102 261 ntBASIC1.6□□□□□ -2.15
O00370 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.6□□□□□ -2.15
O00370 HSPE1P9-201ENST00000440046 311 ntBASIC1.6□□□□□ -2.15
O00370 RNU6-397P-201ENST00000516226 104 ntBASIC1.6□□□□□ -2.15
O00370 RNU6-988P-201ENST00000519081 107 ntBASIC1.6□□□□□ -2.15
O00370 MIR4498-201ENST00000577599 66 ntBASIC1.6□□□□□ -2.15
O00370 SNORD53B-201ENST00000577887 78 ntBASIC1.6□□□□□ -2.15
O00370 MIR4303-201ENST00000581299 66 ntBASIC1.6□□□□□ -2.15
O00370 AC006380.1-201ENST00000603598 186 ntBASIC1.6□□□□□ -2.15
O00370 AC073413.2-201ENST00000604332 360 ntBASIC1.6□□□□□ -2.15
O00370 AL645939.4-201ENST00000604495 135 ntBASIC1.6□□□□□ -2.15
O00370 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.6□□□□□ -2.15
O00370 U6.115-201ENST00000636045 103 ntBASIC1.6□□□□□ -2.15
O00370 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
O00370 RNU4-13P-201ENST00000364019 141 ntBASIC1.59□□□□□ -2.15
O00370 SNORA4.2-201ENST00000365313 147 ntBASIC1.59□□□□□ -2.15
O00370 Y_RNA.395-201ENST00000383945 109 ntBASIC1.59□□□□□ -2.15
O00370 RNU6-296P-201ENST00000384608 107 ntBASIC1.59□□□□□ -2.15
O00370 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.59□□□□□ -2.15
O00370 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.59□□□□□ -2.15
O00370 RPL36AP21-201ENST00000490372 323 ntBASIC1.59□□□□□ -2.15
O00370 AC010598.1-201ENST00000510378 103 ntBASIC1.59□□□□□ -2.15
O00370 SNORA25.10-201ENST00000515926 124 ntBASIC1.59□□□□□ -2.15
O00370 SNORA40.14-201ENST00000516543 86 ntBASIC1.59□□□□□ -2.15
O00370 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
O00370 AC124312.5-201ENST00000604451 268 ntBASIC1.59□□□□□ -2.15
O00370 Y_RNA.772-201ENST00000606692 102 ntBASIC1.59□□□□□ -2.15
O00370 WWP1P1-201ENST00000466609 2769 ntBASIC1.59□□□□□ -2.15
O00370 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
O00370 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
O00370 MIR378A-201ENST00000362177 66 ntBASIC1.58□□□□□ -2.16
O00370 Y_RNA.101-201ENST00000363154 102 ntBASIC1.58□□□□□ -2.16
O00370 SNORA22B-201ENST00000383876 138 ntBASIC1.58□□□□□ -2.16
O00370 Y_RNA.389-201ENST00000383924 113 ntBASIC1.58□□□□□ -2.16
O00370 Y_RNA.526-201ENST00000384572 110 ntBASIC1.58□□□□□ -2.16
O00370 RNU6-376P-201ENST00000384731 106 ntBASIC1.58□□□□□ -2.16
O00370 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.58□□□□□ -2.16
O00370 SNORA67.6-201ENST00000391093 99 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 180.1 ms