Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 SNORA31.24-201ENST00000517232 57 ntBASIC1.47□□□□□ -2.17
CCDC188H7C350 RNU7-128P-201ENST00000517247 62 ntBASIC1.47□□□□□ -2.17
CCDC188H7C350 SUMO2P16-201ENST00000519475 264 ntBASIC1.47□□□□□ -2.17
CCDC188H7C350 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.47□□□□□ -2.17
CCDC188H7C350 AL442163.3-201ENST00000554110 156 ntBASIC1.47□□□□□ -2.17
CCDC188H7C350 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
CCDC188H7C350 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
CCDC188H7C350 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.46□□□□□ -2.18
CCDC188H7C350 RNY3P11-201ENST00000364153 102 ntBASIC1.46□□□□□ -2.18
CCDC188H7C350 MIR499A-201ENST00000384903 122 ntBASIC1.46□□□□□ -2.18
CCDC188H7C350 MIR758-201ENST00000390227 88 ntBASIC1.46□□□□□ -2.18
CCDC188H7C350 SNORA17.3-201ENST00000391159 129 ntBASIC1.46□□□□□ -2.18
CCDC188H7C350 AL355796.1-201ENST00000406706 323 ntBASIC1.46□□□□□ -2.18
CCDC188H7C350 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.46□□□□□ -2.18
CCDC188H7C350 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.46□□□□□ -2.18
CCDC188H7C350 SNRPGP13-201ENST00000442212 177 ntBASIC1.46□□□□□ -2.18
CCDC188H7C350 RNU6-902P-201ENST00000517212 91 ntBASIC1.46□□□□□ -2.18
CCDC188H7C350 AC015688.6-201ENST00000577737 104 ntBASIC1.46□□□□□ -2.18
CCDC188H7C350 SNORD53B-201ENST00000577887 78 ntBASIC1.46□□□□□ -2.18
CCDC188H7C350 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.46□□□□□ -2.18
CCDC188H7C350 SNORA28-201ENST00000606769 126 ntBASIC1.46□□□□□ -2.18
CCDC188H7C350 AL365434.2-201ENST00000607979 234 ntBASIC1.46□□□□□ -2.18
CCDC188H7C350 MIR6079-201ENST00000635807 62 ntBASIC1.46□□□□□ -2.18
CCDC188H7C350 RNU1-22P-201ENST00000363334 158 ntBASIC1.45□□□□□ -2.18
CCDC188H7C350 RNU6-1283P-201ENST00000365314 105 ntBASIC1.45□□□□□ -2.18
CCDC188H7C350 Y_RNA.474-201ENST00000384341 102 ntBASIC1.45□□□□□ -2.18
CCDC188H7C350 Y_RNA.508-201ENST00000384502 114 ntBASIC1.45□□□□□ -2.18
CCDC188H7C350 SNORA67.6-201ENST00000391093 99 ntBASIC1.45□□□□□ -2.18
CCDC188H7C350 RNY4P36-201ENST00000391116 96 ntBASIC1.45□□□□□ -2.18
CCDC188H7C350 RN7SKP51-201ENST00000410781 304 ntBASIC1.45□□□□□ -2.18
CCDC188H7C350 MTCO2P27-201ENST00000420740 428 ntBASIC1.45□□□□□ -2.18
CCDC188H7C350 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.45□□□□□ -2.18
CCDC188H7C350 AC092473.1-201ENST00000441098 221 ntBASIC1.45□□□□□ -2.18
CCDC188H7C350 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.45□□□□□ -2.18
CCDC188H7C350 PGBD4P5-201ENST00000445958 426 ntBASIC1.45□□□□□ -2.18
CCDC188H7C350 FCF1P4-201ENST00000448326 183 ntBASIC1.45□□□□□ -2.18
CCDC188H7C350 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.45□□□□□ -2.18
CCDC188H7C350 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.45□□□□□ -2.18
CCDC188H7C350 SNORA31.10-201ENST00000516482 106 ntBASIC1.45□□□□□ -2.18
CCDC188H7C350 AC023442.1-201ENST00000531247 422 ntBASIC1.45□□□□□ -2.18
CCDC188H7C350 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.45□□□□□ -2.18
CCDC188H7C350 AC006380.1-201ENST00000603598 186 ntBASIC1.45□□□□□ -2.18
CCDC188H7C350 AL359821.1-201ENST00000605519 182 ntBASIC1.45□□□□□ -2.18
CCDC188H7C350 SNORA27.1-201ENST00000362604 124 ntBASIC1.44□□□□□ -2.18
CCDC188H7C350 MIR562-201ENST00000384894 95 ntBASIC1.44□□□□□ -2.18
CCDC188H7C350 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.44□□□□□ -2.18
CCDC188H7C350 BTF3P4-201ENST00000418852 495 ntBASIC1.44□□□□□ -2.18
CCDC188H7C350 RPS27P16-201ENST00000425758 201 ntBASIC1.44□□□□□ -2.18
CCDC188H7C350 AC099799.1-201ENST00000439809 192 ntBASIC1.44□□□□□ -2.18
CCDC188H7C350 AC027119.1-201ENST00000440877 241 ntBASIC1.44□□□□□ -2.18
CCDC188H7C350 RPS29P23-201ENST00000458635 123 ntBASIC1.44□□□□□ -2.18
CCDC188H7C350 AL162424.1-201ENST00000602325 221 ntBASIC1.44□□□□□ -2.18
CCDC188H7C350 AC084781.2-201ENST00000615568 161 ntBASIC1.44□□□□□ -2.18
CCDC188H7C350 AL078604.3-201ENST00000615580 211 ntBASIC1.44□□□□□ -2.18
CCDC188H7C350 AC087588.2-201ENST00000617667 426 ntBASIC1.44□□□□□ -2.18
CCDC188H7C350 SNORD3E-202ENST00000627253 216 ntBASIC1.44□□□□□ -2.18
CCDC188H7C350 U6.115-201ENST00000636045 103 ntBASIC1.44□□□□□ -2.18
CCDC188H7C350 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
CCDC188H7C350 AL161722.3-201ENST00000605789 2983 ntBASIC1.43□□□□□ -2.18
CCDC188H7C350 MIR302D-201ENST00000362275 68 ntBASIC1.43□□□□□ -2.18
CCDC188H7C350 RNU6-457P-201ENST00000363999 107 ntBASIC1.43□□□□□ -2.18
CCDC188H7C350 RNU4-13P-201ENST00000364019 141 ntBASIC1.43□□□□□ -2.18
CCDC188H7C350 Y_RNA.269-201ENST00000364685 89 ntBASIC1.43□□□□□ -2.18
CCDC188H7C350 Y_RNA.356-201ENST00000365475 113 ntBASIC1.43□□□□□ -2.18
CCDC188H7C350 SNORD78.2-201ENST00000391076 69 ntBASIC1.43□□□□□ -2.18
CCDC188H7C350 MIR873-201ENST00000401120 77 ntBASIC1.43□□□□□ -2.18
CCDC188H7C350 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.43□□□□□ -2.18
CCDC188H7C350 AP1B1P2-201ENST00000416196 106 ntBASIC1.43□□□□□ -2.18
CCDC188H7C350 MRPS18CP6-201ENST00000423587 223 ntBASIC1.43□□□□□ -2.18
CCDC188H7C350 SUMO1P2-201ENST00000452524 304 ntBASIC1.43□□□□□ -2.18
CCDC188H7C350 AC091021.1-201ENST00000468051 388 ntBASIC1.43□□□□□ -2.18
CCDC188H7C350 AL163540.1-201ENST00000485382 386 ntBASIC1.43□□□□□ -2.18
CCDC188H7C350 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.43□□□□□ -2.18
CCDC188H7C350 AC099513.1-201ENST00000490423 301 ntBASIC1.43□□□□□ -2.18
CCDC188H7C350 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.43□□□□□ -2.18
CCDC188H7C350 U2.1-201ENST00000618978 145 ntBASIC1.43□□□□□ -2.18
CCDC188H7C350 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
CCDC188H7C350 RNU6-490P-201ENST00000362985 107 ntBASIC1.42□□□□□ -2.18
CCDC188H7C350 RNU6-60P-201ENST00000364792 103 ntBASIC1.42□□□□□ -2.18
CCDC188H7C350 Y_RNA.355-201ENST00000365462 98 ntBASIC1.42□□□□□ -2.18
CCDC188H7C350 MIR194-1-201ENST00000384892 85 ntBASIC1.42□□□□□ -2.18
CCDC188H7C350 RNU6-1009P-201ENST00000390996 107 ntBASIC1.42□□□□□ -2.18
CCDC188H7C350 AC015922.2-201ENST00000435593 184 ntBASIC1.42□□□□□ -2.18
CCDC188H7C350 AC233266.1-201ENST00000454518 96 ntBASIC1.42□□□□□ -2.18
CCDC188H7C350 AL161670.1-201ENST00000554348 137 ntBASIC1.42□□□□□ -2.18
CCDC188H7C350 AC068338.1-201ENST00000565567 176 ntBASIC1.42□□□□□ -2.18
CCDC188H7C350 AL355375.2-201ENST00000574825 175 ntBASIC1.42□□□□□ -2.18
CCDC188H7C350 MIR4801-201ENST00000582704 82 ntBASIC1.42□□□□□ -2.18
CCDC188H7C350 AC242852.1-201ENST00000612151 96 ntBASIC1.42□□□□□ -2.18
CCDC188H7C350 MIR8070-201ENST00000616510 88 ntBASIC1.42□□□□□ -2.18
CCDC188H7C350 AC073349.3-201ENST00000617616 186 ntBASIC1.42□□□□□ -2.18
CCDC188H7C350 AC244015.1-201ENST00000622301 99 ntBASIC1.42□□□□□ -2.18
CCDC188H7C350 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
CCDC188H7C350 RNU6-324P-201ENST00000363957 106 ntBASIC1.41□□□□□ -2.18
CCDC188H7C350 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.41□□□□□ -2.18
CCDC188H7C350 RNU6-1040P-201ENST00000383974 107 ntBASIC1.41□□□□□ -2.18
CCDC188H7C350 Y_RNA.428-201ENST00000384078 102 ntBASIC1.41□□□□□ -2.18
CCDC188H7C350 MIR518E-201ENST00000385252 88 ntBASIC1.41□□□□□ -2.18
CCDC188H7C350 AC096644.2-201ENST00000429278 159 ntBASIC1.41□□□□□ -2.18
CCDC188H7C350 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 160.7 ms