Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 EPS15P1-201ENST00000448836 336 ntBASIC-1.04□□□□□ -2.58
CHKB-CPT1BH3BT56 MIR18B-201ENST00000454574 71 ntBASIC-1.04□□□□□ -2.58
CHKB-CPT1BH3BT56 RNU7-62P-201ENST00000458856 62 ntBASIC-1.04□□□□□ -2.58
CHKB-CPT1BH3BT56 AC116353.2-201ENST00000505332 712 ntBASIC-1.04□□□□□ -2.58
CHKB-CPT1BH3BT56 AC116562.3-201ENST00000506136 177 ntBASIC-1.04□□□□□ -2.58
CHKB-CPT1BH3BT56 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-1.04□□□□□ -2.58
CHKB-CPT1BH3BT56 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC-1.04□□□□□ -2.58
CHKB-CPT1BH3BT56 NAMPTP3-201ENST00000569273 224 ntBASIC-1.04□□□□□ -2.58
CHKB-CPT1BH3BT56 Y_RNA.22-201ENST00000362492 102 ntBASIC-1.05□□□□□ -2.58
CHKB-CPT1BH3BT56 RNU6-116P-201ENST00000384042 109 ntBASIC-1.05□□□□□ -2.58
CHKB-CPT1BH3BT56 RNU6-376P-201ENST00000384731 106 ntBASIC-1.05□□□□□ -2.58
CHKB-CPT1BH3BT56 MIR329-1-201ENST00000385028 80 ntBASIC-1.05□□□□□ -2.58
CHKB-CPT1BH3BT56 AC137499.1-201ENST00000427602 88 ntBASIC-1.05□□□□□ -2.58
CHKB-CPT1BH3BT56 MTCO2P11-201ENST00000431069 680 ntBASIC-1.05□□□□□ -2.58
CHKB-CPT1BH3BT56 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-1.05□□□□□ -2.58
CHKB-CPT1BH3BT56 PRDX4P1-201ENST00000507189 574 ntBASIC-1.05□□□□□ -2.58
CHKB-CPT1BH3BT56 AC046134.1-201ENST00000514454 666 ntBASIC-1.05□□□□□ -2.58
CHKB-CPT1BH3BT56 MTND3P13-201ENST00000574391 343 ntBASIC-1.05□□□□□ -2.58
CHKB-CPT1BH3BT56 MIR4493-201ENST00000584016 73 ntBASIC-1.05□□□□□ -2.58
CHKB-CPT1BH3BT56 AC125232.2-201ENST00000592457 143 ntBASIC-1.05□□□□□ -2.58
CHKB-CPT1BH3BT56 MTND5P32-201ENST00000560711 1802 ntBASIC-1.05□□□□□ -2.58
CHKB-CPT1BH3BT56 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-1.06□□□□□ -2.58
CHKB-CPT1BH3BT56 RNU6-1286P-201ENST00000383871 107 ntBASIC-1.06□□□□□ -2.58
CHKB-CPT1BH3BT56 RNU5A-6P-201ENST00000384136 116 ntBASIC-1.06□□□□□ -2.58
CHKB-CPT1BH3BT56 Y_RNA.477-201ENST00000384352 108 ntBASIC-1.06□□□□□ -2.58
CHKB-CPT1BH3BT56 MIR1257-201ENST00000408490 117 ntBASIC-1.06□□□□□ -2.58
CHKB-CPT1BH3BT56 AC244250.2-201ENST00000418731 148 ntBASIC-1.06□□□□□ -2.58
CHKB-CPT1BH3BT56 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-1.06□□□□□ -2.58
CHKB-CPT1BH3BT56 RNU7-185P-201ENST00000459215 60 ntBASIC-1.06□□□□□ -2.58
CHKB-CPT1BH3BT56 RNU6-135P-201ENST00000516769 101 ntBASIC-1.06□□□□□ -2.58
CHKB-CPT1BH3BT56 SNORA25.17-201ENST00000517184 124 ntBASIC-1.06□□□□□ -2.58
CHKB-CPT1BH3BT56 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC-1.06□□□□□ -2.58
CHKB-CPT1BH3BT56 AC121247.2-201ENST00000604776 136 ntBASIC-1.06□□□□□ -2.58
CHKB-CPT1BH3BT56 uc_338.4-201ENST00000616635 176 ntBASIC-1.06□□□□□ -2.58
CHKB-CPT1BH3BT56 RNU6-179P-201ENST00000363350 107 ntBASIC-1.07□□□□□ -2.58
CHKB-CPT1BH3BT56 Y_RNA.170-201ENST00000363746 110 ntBASIC-1.07□□□□□ -2.58
CHKB-CPT1BH3BT56 RNU4-1-201ENST00000363925 141 ntBASIC-1.07□□□□□ -2.58
CHKB-CPT1BH3BT56 RNU6-245P-201ENST00000384020 107 ntBASIC-1.07□□□□□ -2.58
CHKB-CPT1BH3BT56 Y_RNA.480-201ENST00000384364 102 ntBASIC-1.07□□□□□ -2.58
CHKB-CPT1BH3BT56 FCF1P9-201ENST00000412546 282 ntBASIC-1.07□□□□□ -2.58
CHKB-CPT1BH3BT56 AL359672.1-201ENST00000442302 409 ntBASIC-1.07□□□□□ -2.58
CHKB-CPT1BH3BT56 Y_RNA.638-201ENST00000459374 113 ntBASIC-1.07□□□□□ -2.58
CHKB-CPT1BH3BT56 MTCO2P29-201ENST00000465212 189 ntBASIC-1.07□□□□□ -2.58
CHKB-CPT1BH3BT56 RNU6-334P-201ENST00000517072 102 ntBASIC-1.07□□□□□ -2.58
CHKB-CPT1BH3BT56 MIR4802-201ENST00000581881 80 ntBASIC-1.07□□□□□ -2.58
CHKB-CPT1BH3BT56 TUG1_4.1-201ENST00000619464 181 ntBASIC-1.07□□□□□ -2.58
CHKB-CPT1BH3BT56 AC137590.2-201ENST00000619709 240 ntBASIC-1.07□□□□□ -2.58
CHKB-CPT1BH3BT56 RNU6-1229P-201ENST00000364295 107 ntBASIC-1.08□□□□□ -2.58
CHKB-CPT1BH3BT56 SNORA63C-201ENST00000364578 129 ntBASIC-1.08□□□□□ -2.58
CHKB-CPT1BH3BT56 Y_RNA.270-201ENST00000364693 104 ntBASIC-1.08□□□□□ -2.58
CHKB-CPT1BH3BT56 SNORD115-7-201ENST00000365306 82 ntBASIC-1.08□□□□□ -2.58
CHKB-CPT1BH3BT56 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-1.08□□□□□ -2.58
CHKB-CPT1BH3BT56 MIR224-201ENST00000384889 81 ntBASIC-1.08□□□□□ -2.58
CHKB-CPT1BH3BT56 MIR563-201ENST00000385080 79 ntBASIC-1.08□□□□□ -2.58
CHKB-CPT1BH3BT56 MIR613-201ENST00000385248 95 ntBASIC-1.08□□□□□ -2.58
CHKB-CPT1BH3BT56 MT-TQ-201ENST00000387372 72 ntBASIC-1.08□□□□□ -2.58
CHKB-CPT1BH3BT56 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC-1.08□□□□□ -2.58
CHKB-CPT1BH3BT56 RNU6-1178P-201ENST00000516674 107 ntBASIC-1.08□□□□□ -2.58
CHKB-CPT1BH3BT56 5S_rRNA.15-201ENST00000611169 127 ntBASIC-1.08□□□□□ -2.58
CHKB-CPT1BH3BT56 RNU6-1048P-201ENST00000364054 107 ntBASIC-1.09□□□□□ -2.58
CHKB-CPT1BH3BT56 RNU6-1322P-201ENST00000364309 107 ntBASIC-1.09□□□□□ -2.58
CHKB-CPT1BH3BT56 MIR215-201ENST00000384858 110 ntBASIC-1.09□□□□□ -2.58
CHKB-CPT1BH3BT56 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-1.09□□□□□ -2.58
CHKB-CPT1BH3BT56 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-1.09□□□□□ -2.58
CHKB-CPT1BH3BT56 AF186996.7-201ENST00000492781 209 ntBASIC-1.09□□□□□ -2.58
CHKB-CPT1BH3BT56 AC091959.1-201ENST00000495857 238 ntBASIC-1.09□□□□□ -2.58
CHKB-CPT1BH3BT56 Y_RNA.666-201ENST00000516187 112 ntBASIC-1.09□□□□□ -2.58
CHKB-CPT1BH3BT56 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-1.09□□□□□ -2.58
CHKB-CPT1BH3BT56 AC138749.4-201ENST00000563970 127 ntBASIC-1.09□□□□□ -2.58
CHKB-CPT1BH3BT56 AC006600.1-201ENST00000572529 153 ntBASIC-1.09□□□□□ -2.58
CHKB-CPT1BH3BT56 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-1.09□□□□□ -2.58
CHKB-CPT1BH3BT56 MIR4677-201ENST00000584153 80 ntBASIC-1.09□□□□□ -2.58
CHKB-CPT1BH3BT56 U7.6-201ENST00000610841 64 ntBASIC-1.09□□□□□ -2.58
CHKB-CPT1BH3BT56 AC022418.1-201ENST00000624118 445 ntBASIC-1.09□□□□□ -2.58
CHKB-CPT1BH3BT56 AC010332.2-201ENST00000613083 1904 ntBASIC-1.09□□□□□ -2.58
CHKB-CPT1BH3BT56 RNU6-227P-201ENST00000362865 103 ntBASIC-1.1□□□□□ -2.59
CHKB-CPT1BH3BT56 RNA5SP205-201ENST00000364653 136 ntBASIC-1.1□□□□□ -2.59
CHKB-CPT1BH3BT56 SNORA51.10-201ENST00000384418 136 ntBASIC-1.1□□□□□ -2.59
CHKB-CPT1BH3BT56 Y_RNA.552-201ENST00000384665 112 ntBASIC-1.1□□□□□ -2.59
CHKB-CPT1BH3BT56 SNORD28-201ENST00000384706 75 ntBASIC-1.1□□□□□ -2.59
CHKB-CPT1BH3BT56 MIR570-201ENST00000384917 97 ntBASIC-1.1□□□□□ -2.59
CHKB-CPT1BH3BT56 RNU6-550P-201ENST00000391057 101 ntBASIC-1.1□□□□□ -2.59
CHKB-CPT1BH3BT56 MIR873-201ENST00000401120 77 ntBASIC-1.1□□□□□ -2.59
CHKB-CPT1BH3BT56 RNU4-63P-201ENST00000411313 118 ntBASIC-1.1□□□□□ -2.59
CHKB-CPT1BH3BT56 AC092447.3-201ENST00000426027 686 ntBASIC-1.1□□□□□ -2.59
CHKB-CPT1BH3BT56 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-1.1□□□□□ -2.59
CHKB-CPT1BH3BT56 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-1.1□□□□□ -2.59
CHKB-CPT1BH3BT56 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-1.1□□□□□ -2.59
CHKB-CPT1BH3BT56 MTND4P18-201ENST00000447010 465 ntBASIC-1.1□□□□□ -2.59
CHKB-CPT1BH3BT56 MTATP6P15-201ENST00000527233 835 ntBASIC-1.1□□□□□ -2.59
CHKB-CPT1BH3BT56 MTND4P33-201ENST00000556706 766 ntBASIC-1.1□□□□□ -2.59
CHKB-CPT1BH3BT56 MIR5706-201ENST00000579841 80 ntBASIC-1.1□□□□□ -2.59
CHKB-CPT1BH3BT56 BNIP3P39-201ENST00000601077 554 ntBASIC-1.1□□□□□ -2.59
CHKB-CPT1BH3BT56 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-1.1□□□□□ -2.59
CHKB-CPT1BH3BT56 AC006386.1-201ENST00000619436 415 ntBASIC-1.1□□□□□ -2.59
CHKB-CPT1BH3BT56 MTND1P7-201ENST00000632801 297 ntBASIC-1.1□□□□□ -2.59
CHKB-CPT1BH3BT56 Y_RNA.148-201ENST00000363557 117 ntBASIC-1.11□□□□□ -2.59
CHKB-CPT1BH3BT56 SNORA20B-201ENST00000384220 132 ntBASIC-1.11□□□□□ -2.59
CHKB-CPT1BH3BT56 MIR604-201ENST00000384880 94 ntBASIC-1.11□□□□□ -2.59
CHKB-CPT1BH3BT56 MTCO3P40-201ENST00000392516 676 ntBASIC-1.11□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms