Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 MIR486-1-201ENST00000612171 68 ntBASIC3.74□□□□□ -1.81
H3BM21 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.74□□□□□ -1.81
H3BM21 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.74□□□□□ -1.81
H3BM21 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.74□□□□□ -1.81
H3BM21 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.74□□□□□ -1.81
H3BM21 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
H3BM21 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
H3BM21 Y_RNA.377-201ENST00000365644 108 ntBASIC3.73□□□□□ -1.81
H3BM21 SNORD58A-201ENST00000383875 65 ntBASIC3.73□□□□□ -1.81
H3BM21 RNU6-748P-201ENST00000384648 107 ntBASIC3.73□□□□□ -1.81
H3BM21 AC093578.1-201ENST00000415219 368 ntBASIC3.73□□□□□ -1.81
H3BM21 AC004223.1-201ENST00000479840 271 ntBASIC3.73□□□□□ -1.81
H3BM21 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.73□□□□□ -1.81
H3BM21 RNU6-1231P-201ENST00000517185 103 ntBASIC3.73□□□□□ -1.81
H3BM21 MIR5047-201ENST00000579212 100 ntBASIC3.73□□□□□ -1.81
H3BM21 ELOCP29-201ENST00000588193 334 ntBASIC3.73□□□□□ -1.81
H3BM21 AL137849.1-201ENST00000604767 169 ntBASIC3.73□□□□□ -1.81
H3BM21 U7.4-201ENST00000614961 63 ntBASIC3.73□□□□□ -1.81
H3BM21 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.73□□□□□ -1.81
H3BM21 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.72□□□□□ -1.81
H3BM21 RNU6-679P-201ENST00000391003 106 ntBASIC3.72□□□□□ -1.81
H3BM21 SNORA7.5-201ENST00000410672 110 ntBASIC3.72□□□□□ -1.81
H3BM21 ARF4P2-201ENST00000430209 526 ntBASIC3.72□□□□□ -1.81
H3BM21 HMGN2P31-201ENST00000432430 273 ntBASIC3.72□□□□□ -1.81
H3BM21 AC125388.1-201ENST00000459631 156 ntBASIC3.72□□□□□ -1.81
H3BM21 AL049873.1-201ENST00000480540 376 ntBASIC3.72□□□□□ -1.81
H3BM21 HMGN1P7-201ENST00000491722 313 ntBASIC3.72□□□□□ -1.81
H3BM21 RPS29P21-201ENST00000496272 170 ntBASIC3.72□□□□□ -1.81
H3BM21 AC104619.4-201ENST00000510773 249 ntBASIC3.72□□□□□ -1.81
H3BM21 RNU6-1096P-201ENST00000517089 102 ntBASIC3.72□□□□□ -1.81
H3BM21 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.72□□□□□ -1.81
H3BM21 AC000403.1-201ENST00000613696 3585 ntBASIC3.72□□□□□ -1.81
H3BM21 AC007496.3-201ENST00000624987 3443 ntBASIC3.72□□□□□ -1.81
H3BM21 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
H3BM21 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
H3BM21 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
H3BM21 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
H3BM21 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
H3BM21 FAM35BP-202ENST00000497389 3337 ntBASIC3.71□□□□□ -1.82
H3BM21 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.71□□□□□ -1.82
H3BM21 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
H3BM21 SNORD32B-201ENST00000364460 84 ntBASIC3.71□□□□□ -1.82
H3BM21 SNORA14A-201ENST00000364773 135 ntBASIC3.71□□□□□ -1.82
H3BM21 Y_RNA.430-201ENST00000384081 110 ntBASIC3.71□□□□□ -1.82
H3BM21 SNORA9-201ENST00000384215 133 ntBASIC3.71□□□□□ -1.82
H3BM21 MIR483-201ENST00000385070 76 ntBASIC3.71□□□□□ -1.82
H3BM21 U8.15-201ENST00000390947 134 ntBASIC3.71□□□□□ -1.82
H3BM21 HSPE1P26-201ENST00000405341 275 ntBASIC3.71□□□□□ -1.82
H3BM21 RHEBP3-201ENST00000411920 351 ntBASIC3.71□□□□□ -1.82
H3BM21 RNU7-14P-201ENST00000459331 62 ntBASIC3.71□□□□□ -1.82
H3BM21 RAC1P2-201ENST00000511164 579 ntBASIC3.71□□□□□ -1.82
H3BM21 RNU6-928P-201ENST00000516876 104 ntBASIC3.71□□□□□ -1.82
H3BM21 MIR4438-201ENST00000585271 93 ntBASIC3.71□□□□□ -1.82
H3BM21 AC012493.2-201ENST00000595083 291 ntBASIC3.71□□□□□ -1.82
H3BM21 AC022217.4-201ENST00000604389 163 ntBASIC3.71□□□□□ -1.82
H3BM21 FAS-AS1.1-201ENST00000615327 126 ntBASIC3.71□□□□□ -1.82
H3BM21 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
H3BM21 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
H3BM21 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
H3BM21 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
H3BM21 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
H3BM21 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
H3BM21 RNA5SP72-201ENST00000364442 117 ntBASIC3.7□□□□□ -1.82
H3BM21 Y_RNA.242-201ENST00000364473 110 ntBASIC3.7□□□□□ -1.82
H3BM21 MIR218-2-201ENST00000385006 110 ntBASIC3.7□□□□□ -1.82
H3BM21 Z98941.1-201ENST00000407764 100 ntBASIC3.7□□□□□ -1.82
H3BM21 RNU2-37P-201ENST00000410695 177 ntBASIC3.7□□□□□ -1.82
H3BM21 SNORA71B-202ENST00000439232 272 ntBASIC3.7□□□□□ -1.82
H3BM21 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.7□□□□□ -1.82
H3BM21 AC010401.1-201ENST00000463867 348 ntBASIC3.7□□□□□ -1.82
H3BM21 RPS23P4-201ENST00000487908 423 ntBASIC3.7□□□□□ -1.82
H3BM21 RNA5SP208-201ENST00000516156 78 ntBASIC3.7□□□□□ -1.82
H3BM21 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
H3BM21 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.7□□□□□ -1.82
H3BM21 SNORA62.6-201ENST00000606322 83 ntBASIC3.7□□□□□ -1.82
H3BM21 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
H3BM21 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.7□□□□□ -1.82
H3BM21 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.7□□□□□ -1.82
H3BM21 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.7□□□□□ -1.82
H3BM21 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
H3BM21 AC010680.1-201ENST00000590024 3590 ntBASIC3.69□□□□□ -1.82
H3BM21 RNU4-16P-201ENST00000364737 141 ntBASIC3.69□□□□□ -1.82
H3BM21 RNU6-438P-201ENST00000365561 103 ntBASIC3.69□□□□□ -1.82
H3BM21 RNU6-1201P-201ENST00000384227 107 ntBASIC3.69□□□□□ -1.82
H3BM21 ATP5A1P2-201ENST00000412323 255 ntBASIC3.69□□□□□ -1.82
H3BM21 AC016909.1-201ENST00000415916 166 ntBASIC3.69□□□□□ -1.82
H3BM21 SNORD105B-201ENST00000458770 79 ntBASIC3.69□□□□□ -1.82
H3BM21 AP001486.1-201ENST00000463339 476 ntBASIC3.69□□□□□ -1.82
H3BM21 AC106707.2-201ENST00000484182 374 ntBASIC3.69□□□□□ -1.82
H3BM21 TRBV12-2-201ENST00000489763 344 ntBASIC3.69□□□□□ -1.82
H3BM21 RPL23AP63-201ENST00000498752 471 ntBASIC3.69□□□□□ -1.82
H3BM21 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.69□□□□□ -1.82
H3BM21 RNU6-539P-201ENST00000516665 103 ntBASIC3.69□□□□□ -1.82
H3BM21 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.69□□□□□ -1.82
H3BM21 AC007179.3-201ENST00000604976 235 ntBASIC3.69□□□□□ -1.82
H3BM21 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
H3BM21 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
H3BM21 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
H3BM21 Y_RNA.253-201ENST00000364562 112 ntBASIC3.68□□□□□ -1.82
H3BM21 Y_RNA.340-201ENST00000365330 92 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms