Protein–RNA interactions for Protein: B0FP48

UPK3BL1, Uroplakin-3b-like protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1B0FP48 RNU6-768P-201ENST00000384683 107 ntBASIC3.11□□□□□ -1.91
UPK3BL1B0FP48 MIR627-201ENST00000384979 97 ntBASIC3.11□□□□□ -1.91
UPK3BL1B0FP48 AC097462.1-201ENST00000514125 324 ntBASIC3.11□□□□□ -1.91
UPK3BL1B0FP48 RNA5SP217-201ENST00000515959 91 ntBASIC3.11□□□□□ -1.91
UPK3BL1B0FP48 RNU1-143P-201ENST00000516296 146 ntBASIC3.11□□□□□ -1.91
UPK3BL1B0FP48 NDUFA5P6-201ENST00000542110 379 ntBASIC3.11□□□□□ -1.91
UPK3BL1B0FP48 PRELID2P1-201ENST00000552837 301 ntBASIC3.11□□□□□ -1.91
UPK3BL1B0FP48 GTF3AP2-201ENST00000557014 266 ntBASIC3.11□□□□□ -1.91
UPK3BL1B0FP48 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.11□□□□□ -1.91
UPK3BL1B0FP48 U1.23-201ENST00000610293 146 ntBASIC3.11□□□□□ -1.91
UPK3BL1B0FP48 RNU1-68P-201ENST00000615382 146 ntBASIC3.11□□□□□ -1.91
UPK3BL1B0FP48 U4atac.1-201ENST00000618345 95 ntBASIC3.11□□□□□ -1.91
UPK3BL1B0FP48 U1.39-201ENST00000621562 146 ntBASIC3.11□□□□□ -1.91
UPK3BL1B0FP48 AP001340.1-201ENST00000624405 217 ntBASIC3.11□□□□□ -1.91
UPK3BL1B0FP48 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
UPK3BL1B0FP48 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
UPK3BL1B0FP48 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.11□□□□□ -1.91
UPK3BL1B0FP48 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.11□□□□□ -1.91
UPK3BL1B0FP48 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.11□□□□□ -1.91
UPK3BL1B0FP48 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.11□□□□□ -1.91
UPK3BL1B0FP48 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
UPK3BL1B0FP48 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
UPK3BL1B0FP48 SNORD56.3-201ENST00000363507 71 ntBASIC3.1□□□□□ -1.91
UPK3BL1B0FP48 SNORA54-201ENST00000384281 123 ntBASIC3.1□□□□□ -1.91
UPK3BL1B0FP48 SNORD67-201ENST00000390833 111 ntBASIC3.1□□□□□ -1.91
UPK3BL1B0FP48 Y_RNA.587-201ENST00000391210 103 ntBASIC3.1□□□□□ -1.91
UPK3BL1B0FP48 RNU2-48P-201ENST00000410694 191 ntBASIC3.1□□□□□ -1.91
UPK3BL1B0FP48 Y_RNA.629-201ENST00000411368 105 ntBASIC3.1□□□□□ -1.91
UPK3BL1B0FP48 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.1□□□□□ -1.91
UPK3BL1B0FP48 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.1□□□□□ -1.91
UPK3BL1B0FP48 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.1□□□□□ -1.91
UPK3BL1B0FP48 RNU6-856P-201ENST00000516959 98 ntBASIC3.1□□□□□ -1.91
UPK3BL1B0FP48 MIR378D2-201ENST00000580636 98 ntBASIC3.1□□□□□ -1.91
UPK3BL1B0FP48 MIR4438-201ENST00000585271 93 ntBASIC3.1□□□□□ -1.91
UPK3BL1B0FP48 U2.20-201ENST00000613956 192 ntBASIC3.1□□□□□ -1.91
UPK3BL1B0FP48 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.1□□□□□ -1.91
UPK3BL1B0FP48 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
UPK3BL1B0FP48 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
UPK3BL1B0FP48 ZNF702P-202ENST00000434269 1966 ntBASIC3.09□□□□□ -1.91
UPK3BL1B0FP48 Y_RNA.420-201ENST00000384043 110 ntBASIC3.09□□□□□ -1.91
UPK3BL1B0FP48 SNORA75.5-201ENST00000391291 81 ntBASIC3.09□□□□□ -1.91
UPK3BL1B0FP48 RPL32P35-201ENST00000415214 394 ntBASIC3.09□□□□□ -1.91
UPK3BL1B0FP48 TRIAP1P1-201ENST00000427062 225 ntBASIC3.09□□□□□ -1.91
UPK3BL1B0FP48 AL445687.1-201ENST00000439946 251 ntBASIC3.09□□□□□ -1.91
UPK3BL1B0FP48 AC092991.1-201ENST00000477176 376 ntBASIC3.09□□□□□ -1.91
UPK3BL1B0FP48 AC091826.1-201ENST00000514065 313 ntBASIC3.09□□□□□ -1.91
UPK3BL1B0FP48 RNU6-1146P-201ENST00000516282 102 ntBASIC3.09□□□□□ -1.91
UPK3BL1B0FP48 RNA5SP367-201ENST00000516557 118 ntBASIC3.09□□□□□ -1.91
UPK3BL1B0FP48 RNU7-172P-201ENST00000517125 64 ntBASIC3.09□□□□□ -1.91
UPK3BL1B0FP48 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.09□□□□□ -1.91
UPK3BL1B0FP48 U6.73-201ENST00000619194 103 ntBASIC3.09□□□□□ -1.91
UPK3BL1B0FP48 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.09□□□□□ -1.91
UPK3BL1B0FP48 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.92
UPK3BL1B0FP48 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.09□□□□□ -1.92
UPK3BL1B0FP48 Y_RNA.127-201ENST00000363386 109 ntBASIC3.08□□□□□ -1.92
UPK3BL1B0FP48 RNA5SP205-201ENST00000364653 136 ntBASIC3.08□□□□□ -1.92
UPK3BL1B0FP48 Y_RNA.542-201ENST00000384641 111 ntBASIC3.08□□□□□ -1.92
UPK3BL1B0FP48 RNU6-735P-201ENST00000410612 107 ntBASIC3.08□□□□□ -1.92
UPK3BL1B0FP48 Y_RNA.622-201ENST00000411091 108 ntBASIC3.08□□□□□ -1.92
UPK3BL1B0FP48 AL139132.1-201ENST00000431587 344 ntBASIC3.08□□□□□ -1.92
UPK3BL1B0FP48 RNU6-197P-201ENST00000516680 100 ntBASIC3.08□□□□□ -1.92
UPK3BL1B0FP48 AC093331.1-201ENST00000521474 169 ntBASIC3.08□□□□□ -1.92
UPK3BL1B0FP48 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.08□□□□□ -1.92
UPK3BL1B0FP48 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.08□□□□□ -1.92
UPK3BL1B0FP48 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
UPK3BL1B0FP48 AC093010.3-201ENST00000570269 15214 ntBASIC3.07□□□□□ -1.92
UPK3BL1B0FP48 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
UPK3BL1B0FP48 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
UPK3BL1B0FP48 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
UPK3BL1B0FP48 MIR22-201ENST00000362190 85 ntBASIC3.07□□□□□ -1.92
UPK3BL1B0FP48 Y_RNA.71-201ENST00000362892 104 ntBASIC3.07□□□□□ -1.92
UPK3BL1B0FP48 Y_RNA.203-201ENST00000364106 102 ntBASIC3.07□□□□□ -1.92
UPK3BL1B0FP48 RNU11-5P-201ENST00000391216 129 ntBASIC3.07□□□□□ -1.92
UPK3BL1B0FP48 MIR1253-201ENST00000408273 105 ntBASIC3.07□□□□□ -1.92
UPK3BL1B0FP48 RNA5SP184-201ENST00000411071 108 ntBASIC3.07□□□□□ -1.92
UPK3BL1B0FP48 SRIP3-201ENST00000413200 219 ntBASIC3.07□□□□□ -1.92
UPK3BL1B0FP48 EEF1A1P41-201ENST00000414667 207 ntBASIC3.07□□□□□ -1.92
UPK3BL1B0FP48 AC245102.2-201ENST00000448956 180 ntBASIC3.07□□□□□ -1.92
UPK3BL1B0FP48 AC023449.1-201ENST00000454464 154 ntBASIC3.07□□□□□ -1.92
UPK3BL1B0FP48 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.07□□□□□ -1.92
UPK3BL1B0FP48 RPS29P21-201ENST00000496272 170 ntBASIC3.07□□□□□ -1.92
UPK3BL1B0FP48 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC3.07□□□□□ -1.92
UPK3BL1B0FP48 RNU6-991P-201ENST00000516168 107 ntBASIC3.07□□□□□ -1.92
UPK3BL1B0FP48 RNA5SP153-201ENST00000516498 76 ntBASIC3.07□□□□□ -1.92
UPK3BL1B0FP48 RNU6-971P-201ENST00000516920 106 ntBASIC3.07□□□□□ -1.92
UPK3BL1B0FP48 RNU6-667P-201ENST00000517186 102 ntBASIC3.07□□□□□ -1.92
UPK3BL1B0FP48 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
UPK3BL1B0FP48 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
UPK3BL1B0FP48 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
UPK3BL1B0FP48 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
UPK3BL1B0FP48 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
UPK3BL1B0FP48 RNA5SP383-201ENST00000362934 120 ntBASIC3.06□□□□□ -1.92
UPK3BL1B0FP48 RNU1-96P-201ENST00000364163 162 ntBASIC3.06□□□□□ -1.92
UPK3BL1B0FP48 Y_RNA.251-201ENST00000364551 99 ntBASIC3.06□□□□□ -1.92
UPK3BL1B0FP48 RNA5SP125-201ENST00000364843 120 ntBASIC3.06□□□□□ -1.92
UPK3BL1B0FP48 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.06□□□□□ -1.92
UPK3BL1B0FP48 SNORD116-14-201ENST00000383894 92 ntBASIC3.06□□□□□ -1.92
UPK3BL1B0FP48 SNORD116-17-201ENST00000383929 92 ntBASIC3.06□□□□□ -1.92
UPK3BL1B0FP48 RNU6-484P-201ENST00000384016 107 ntBASIC3.06□□□□□ -1.92
UPK3BL1B0FP48 Y_RNA.432-201ENST00000384087 111 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms