Protein–RNA interactions for Protein: A6NJ46

NKX6-3, Homeobox protein Nkx-6.3, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3A6NJ46 PMCHL1-202ENST00000423102 261 ntBASIC1.47□□□□□ -2.17
NKX6-3A6NJ46 MTND4P19-201ENST00000446659 478 ntBASIC1.47□□□□□ -2.17
NKX6-3A6NJ46 Y_RNA.639-201ENST00000458981 102 ntBASIC1.47□□□□□ -2.17
NKX6-3A6NJ46 RNU7-99P-201ENST00000516271 62 ntBASIC1.47□□□□□ -2.17
NKX6-3A6NJ46 RNU6-970P-201ENST00000516312 107 ntBASIC1.47□□□□□ -2.17
NKX6-3A6NJ46 RNU6-155P-201ENST00000516347 100 ntBASIC1.47□□□□□ -2.17
NKX6-3A6NJ46 RNU6-548P-201ENST00000517083 115 ntBASIC1.47□□□□□ -2.17
NKX6-3A6NJ46 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.47□□□□□ -2.17
NKX6-3A6NJ46 AC024995.1-201ENST00000523014 93 ntBASIC1.47□□□□□ -2.17
NKX6-3A6NJ46 AL929325.1-201ENST00000603096 117 ntBASIC1.47□□□□□ -2.17
NKX6-3A6NJ46 AC006380.1-201ENST00000603598 186 ntBASIC1.47□□□□□ -2.17
NKX6-3A6NJ46 AC022217.4-201ENST00000604389 163 ntBASIC1.47□□□□□ -2.17
NKX6-3A6NJ46 AC095038.3-201ENST00000634439 195 ntBASIC1.47□□□□□ -2.17
NKX6-3A6NJ46 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
NKX6-3A6NJ46 MIR410-201ENST00000362222 80 ntBASIC1.46□□□□□ -2.18
NKX6-3A6NJ46 RNU1-22P-201ENST00000363334 158 ntBASIC1.46□□□□□ -2.18
NKX6-3A6NJ46 Y_RNA.216-201ENST00000364205 93 ntBASIC1.46□□□□□ -2.18
NKX6-3A6NJ46 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.46□□□□□ -2.18
NKX6-3A6NJ46 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.46□□□□□ -2.18
NKX6-3A6NJ46 Y_RNA.395-201ENST00000383945 109 ntBASIC1.46□□□□□ -2.18
NKX6-3A6NJ46 Y_RNA.424-201ENST00000384063 103 ntBASIC1.46□□□□□ -2.18
NKX6-3A6NJ46 RNU6-376P-201ENST00000384731 106 ntBASIC1.46□□□□□ -2.18
NKX6-3A6NJ46 RNU6-482P-201ENST00000391068 107 ntBASIC1.46□□□□□ -2.18
NKX6-3A6NJ46 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.46□□□□□ -2.18
NKX6-3A6NJ46 SDAD1P3-201ENST00000427380 333 ntBASIC1.46□□□□□ -2.18
NKX6-3A6NJ46 AC245047.3-201ENST00000429428 127 ntBASIC1.46□□□□□ -2.18
NKX6-3A6NJ46 RPS27P1-201ENST00000450552 247 ntBASIC1.46□□□□□ -2.18
NKX6-3A6NJ46 snoU13.27-201ENST00000459278 104 ntBASIC1.46□□□□□ -2.18
NKX6-3A6NJ46 AC097462.1-201ENST00000514125 324 ntBASIC1.46□□□□□ -2.18
NKX6-3A6NJ46 RNA5SP481-201ENST00000516814 122 ntBASIC1.46□□□□□ -2.18
NKX6-3A6NJ46 AC040926.1-201ENST00000530195 238 ntBASIC1.46□□□□□ -2.18
NKX6-3A6NJ46 MIR4709-201ENST00000577272 72 ntBASIC1.46□□□□□ -2.18
NKX6-3A6NJ46 MIR3198-2-201ENST00000577868 80 ntBASIC1.46□□□□□ -2.18
NKX6-3A6NJ46 MIR502-201ENST00000606349 86 ntBASIC1.46□□□□□ -2.18
NKX6-3A6NJ46 MIR8074-201ENST00000615081 81 ntBASIC1.46□□□□□ -2.18
NKX6-3A6NJ46 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.46□□□□□ -2.18
NKX6-3A6NJ46 AL138825.1-201ENST00000618587 192 ntBASIC1.46□□□□□ -2.18
NKX6-3A6NJ46 WWP1P1-201ENST00000466609 2769 ntBASIC1.46□□□□□ -2.18
NKX6-3A6NJ46 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.46□□□□□ -2.18
NKX6-3A6NJ46 AC005592.1-201ENST00000566527 1640 ntBASIC1.45□□□□□ -2.18
NKX6-3A6NJ46 MIR126-201ENST00000362291 85 ntBASIC1.45□□□□□ -2.18
NKX6-3A6NJ46 RNU6-661P-201ENST00000362409 107 ntBASIC1.45□□□□□ -2.18
NKX6-3A6NJ46 Y_RNA.148-201ENST00000363557 117 ntBASIC1.45□□□□□ -2.18
NKX6-3A6NJ46 Y_RNA.267-201ENST00000364679 109 ntBASIC1.45□□□□□ -2.18
NKX6-3A6NJ46 SNORD14.1-201ENST00000365609 90 ntBASIC1.45□□□□□ -2.18
NKX6-3A6NJ46 RNU6-203P-201ENST00000384038 104 ntBASIC1.45□□□□□ -2.18
NKX6-3A6NJ46 Y_RNA.458-201ENST00000384240 102 ntBASIC1.45□□□□□ -2.18
NKX6-3A6NJ46 Y_RNA.471-201ENST00000384312 102 ntBASIC1.45□□□□□ -2.18
NKX6-3A6NJ46 MIR1267-201ENST00000408723 78 ntBASIC1.45□□□□□ -2.18
NKX6-3A6NJ46 RPEP5-201ENST00000441137 268 ntBASIC1.45□□□□□ -2.18
NKX6-3A6NJ46 RPS29P11-201ENST00000496507 171 ntBASIC1.45□□□□□ -2.18
NKX6-3A6NJ46 AC025465.3-201ENST00000510570 311 ntBASIC1.45□□□□□ -2.18
NKX6-3A6NJ46 RNU6-397P-201ENST00000516226 104 ntBASIC1.45□□□□□ -2.18
NKX6-3A6NJ46 SNORA25.15-201ENST00000516487 89 ntBASIC1.45□□□□□ -2.18
NKX6-3A6NJ46 SNORA40.14-201ENST00000516543 86 ntBASIC1.45□□□□□ -2.18
NKX6-3A6NJ46 RNU6-1153P-201ENST00000516760 105 ntBASIC1.45□□□□□ -2.18
NKX6-3A6NJ46 RNU2-12P-201ENST00000517216 168 ntBASIC1.45□□□□□ -2.18
NKX6-3A6NJ46 MIR4255-201ENST00000579351 72 ntBASIC1.45□□□□□ -2.18
NKX6-3A6NJ46 AL390123.1-201ENST00000603216 237 ntBASIC1.45□□□□□ -2.18
NKX6-3A6NJ46 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.45□□□□□ -2.18
NKX6-3A6NJ46 MIR8063-201ENST00000621930 81 ntBASIC1.45□□□□□ -2.18
NKX6-3A6NJ46 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
NKX6-3A6NJ46 Y_RNA.143-201ENST00000363520 106 ntBASIC1.44□□□□□ -2.18
NKX6-3A6NJ46 RNU6-271P-201ENST00000363858 105 ntBASIC1.44□□□□□ -2.18
NKX6-3A6NJ46 SNORD115-30-201ENST00000364117 82 ntBASIC1.44□□□□□ -2.18
NKX6-3A6NJ46 Y_RNA.243-201ENST00000364481 109 ntBASIC1.44□□□□□ -2.18
NKX6-3A6NJ46 RNU6-1175P-201ENST00000365200 107 ntBASIC1.44□□□□□ -2.18
NKX6-3A6NJ46 Y_RNA.446-201ENST00000384178 104 ntBASIC1.44□□□□□ -2.18
NKX6-3A6NJ46 RNU6-937P-201ENST00000384325 106 ntBASIC1.44□□□□□ -2.18
NKX6-3A6NJ46 MIR30A-201ENST00000385092 71 ntBASIC1.44□□□□□ -2.18
NKX6-3A6NJ46 MIR873-201ENST00000401120 77 ntBASIC1.44□□□□□ -2.18
NKX6-3A6NJ46 MRPL35P1-201ENST00000404272 572 ntBASIC1.44□□□□□ -2.18
NKX6-3A6NJ46 Y_RNA.631-201ENST00000459607 101 ntBASIC1.44□□□□□ -2.18
NKX6-3A6NJ46 RPS26P45-201ENST00000471748 340 ntBASIC1.44□□□□□ -2.18
NKX6-3A6NJ46 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.44□□□□□ -2.18
NKX6-3A6NJ46 SNORA31.10-201ENST00000516482 106 ntBASIC1.44□□□□□ -2.18
NKX6-3A6NJ46 RPL21P9-201ENST00000556149 474 ntBASIC1.44□□□□□ -2.18
NKX6-3A6NJ46 MIR3683-201ENST00000580847 82 ntBASIC1.44□□□□□ -2.18
NKX6-3A6NJ46 AC124312.5-201ENST00000604451 268 ntBASIC1.44□□□□□ -2.18
NKX6-3A6NJ46 Y_RNA.772-201ENST00000606692 102 ntBASIC1.44□□□□□ -2.18
NKX6-3A6NJ46 AL021879.1-201ENST00000611756 288 ntBASIC1.44□□□□□ -2.18
NKX6-3A6NJ46 AC006435.5-201ENST00000624486 112 ntBASIC1.44□□□□□ -2.18
NKX6-3A6NJ46 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.44□□□□□ -2.18
NKX6-3A6NJ46 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.44□□□□□ -2.18
NKX6-3A6NJ46 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
NKX6-3A6NJ46 RNU6-505P-201ENST00000384427 107 ntBASIC1.43□□□□□ -2.18
NKX6-3A6NJ46 RNU6-440P-201ENST00000390882 105 ntBASIC1.43□□□□□ -2.18
NKX6-3A6NJ46 RNU6-360P-201ENST00000390944 104 ntBASIC1.43□□□□□ -2.18
NKX6-3A6NJ46 AL031003.1-201ENST00000404229 172 ntBASIC1.43□□□□□ -2.18
NKX6-3A6NJ46 RNU4-30P-201ENST00000410245 143 ntBASIC1.43□□□□□ -2.18
NKX6-3A6NJ46 RNU2-54P-201ENST00000410299 190 ntBASIC1.43□□□□□ -2.18
NKX6-3A6NJ46 AC112492.4-201ENST00000456549 352 ntBASIC1.43□□□□□ -2.18
NKX6-3A6NJ46 AC091021.1-201ENST00000468051 388 ntBASIC1.43□□□□□ -2.18
NKX6-3A6NJ46 RPS26P55-201ENST00000471178 356 ntBASIC1.43□□□□□ -2.18
NKX6-3A6NJ46 SNORA25.10-201ENST00000515926 124 ntBASIC1.43□□□□□ -2.18
NKX6-3A6NJ46 RNU6-1291P-201ENST00000516591 104 ntBASIC1.43□□□□□ -2.18
NKX6-3A6NJ46 RNU7-110P-201ENST00000516891 62 ntBASIC1.43□□□□□ -2.18
NKX6-3A6NJ46 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
NKX6-3A6NJ46 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.43□□□□□ -2.18
NKX6-3A6NJ46 AC016925.2-201ENST00000605108 242 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 144.4 ms