Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 AC084768.2-201ENST00000622736 221 ntBASIC1.52□□□□□ -2.17
TRBV4-1A0A0J9YWV2 Y_RNA.124-201ENST00000363339 93 ntBASIC1.51□□□□□ -2.17
TRBV4-1A0A0J9YWV2 Y_RNA.158-201ENST00000363651 101 ntBASIC1.51□□□□□ -2.17
TRBV4-1A0A0J9YWV2 RNU6-1175P-201ENST00000365200 107 ntBASIC1.51□□□□□ -2.17
TRBV4-1A0A0J9YWV2 RNU6-407P-201ENST00000365280 104 ntBASIC1.51□□□□□ -2.17
TRBV4-1A0A0J9YWV2 RNU6-117P-201ENST00000365415 107 ntBASIC1.51□□□□□ -2.17
TRBV4-1A0A0J9YWV2 AC117470.1-201ENST00000381974 330 ntBASIC1.51□□□□□ -2.17
TRBV4-1A0A0J9YWV2 Y_RNA.439-201ENST00000384119 94 ntBASIC1.51□□□□□ -2.17
TRBV4-1A0A0J9YWV2 RNU2-7P-201ENST00000410794 178 ntBASIC1.51□□□□□ -2.17
TRBV4-1A0A0J9YWV2 RNU5A-5P-201ENST00000411054 116 ntBASIC1.51□□□□□ -2.17
TRBV4-1A0A0J9YWV2 AL390729.2-201ENST00000416137 156 ntBASIC1.51□□□□□ -2.17
TRBV4-1A0A0J9YWV2 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.51□□□□□ -2.17
TRBV4-1A0A0J9YWV2 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.51□□□□□ -2.17
TRBV4-1A0A0J9YWV2 AC005534.2-201ENST00000431047 433 ntBASIC1.51□□□□□ -2.17
TRBV4-1A0A0J9YWV2 AC073910.1-201ENST00000445047 438 ntBASIC1.51□□□□□ -2.17
TRBV4-1A0A0J9YWV2 Y_RNA.715-201ENST00000517082 110 ntBASIC1.51□□□□□ -2.17
TRBV4-1A0A0J9YWV2 Y_RNA.721-201ENST00000517207 102 ntBASIC1.51□□□□□ -2.17
TRBV4-1A0A0J9YWV2 AL356055.1-201ENST00000602528 446 ntBASIC1.51□□□□□ -2.17
TRBV4-1A0A0J9YWV2 AC124312.5-201ENST00000604451 268 ntBASIC1.51□□□□□ -2.17
TRBV4-1A0A0J9YWV2 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.51□□□□□ -2.17
TRBV4-1A0A0J9YWV2 RNU6-439P-201ENST00000384188 106 ntBASIC1.5□□□□□ -2.17
TRBV4-1A0A0J9YWV2 RNA5SP109-201ENST00000391010 116 ntBASIC1.5□□□□□ -2.17
TRBV4-1A0A0J9YWV2 AL031003.1-201ENST00000404229 172 ntBASIC1.5□□□□□ -2.17
TRBV4-1A0A0J9YWV2 MIR1252-201ENST00000408861 65 ntBASIC1.5□□□□□ -2.17
TRBV4-1A0A0J9YWV2 RNU6-436P-201ENST00000516171 114 ntBASIC1.5□□□□□ -2.17
TRBV4-1A0A0J9YWV2 RNU6-1153P-201ENST00000516760 105 ntBASIC1.5□□□□□ -2.17
TRBV4-1A0A0J9YWV2 RNU7-172P-201ENST00000517125 64 ntBASIC1.5□□□□□ -2.17
TRBV4-1A0A0J9YWV2 AC091544.4-201ENST00000555268 342 ntBASIC1.5□□□□□ -2.17
TRBV4-1A0A0J9YWV2 AC018630.2-201ENST00000534866 2403 ntBASIC1.5□□□□□ -2.17
TRBV4-1A0A0J9YWV2 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
TRBV4-1A0A0J9YWV2 Y_RNA.202-201ENST00000364083 110 ntBASIC1.49□□□□□ -2.17
TRBV4-1A0A0J9YWV2 SNORA4.2-201ENST00000365313 147 ntBASIC1.49□□□□□ -2.17
TRBV4-1A0A0J9YWV2 RPL21P1-201ENST00000399532 476 ntBASIC1.49□□□□□ -2.17
TRBV4-1A0A0J9YWV2 RNU2-61P-201ENST00000411069 191 ntBASIC1.49□□□□□ -2.17
TRBV4-1A0A0J9YWV2 RN7SKP101-201ENST00000411376 320 ntBASIC1.49□□□□□ -2.17
TRBV4-1A0A0J9YWV2 HSPE1P13-201ENST00000451143 297 ntBASIC1.49□□□□□ -2.17
TRBV4-1A0A0J9YWV2 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.49□□□□□ -2.17
TRBV4-1A0A0J9YWV2 RNU7-94P-201ENST00000459576 63 ntBASIC1.49□□□□□ -2.17
TRBV4-1A0A0J9YWV2 UBE2DNL-203ENST00000474922 222 ntBASIC1.49□□□□□ -2.17
TRBV4-1A0A0J9YWV2 RPS29P21-201ENST00000496272 170 ntBASIC1.49□□□□□ -2.17
TRBV4-1A0A0J9YWV2 SNORA70.12-201ENST00000516084 153 ntBASIC1.49□□□□□ -2.17
TRBV4-1A0A0J9YWV2 RNU6-155P-201ENST00000516347 100 ntBASIC1.49□□□□□ -2.17
TRBV4-1A0A0J9YWV2 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.49□□□□□ -2.17
TRBV4-1A0A0J9YWV2 MIR4680-201ENST00000580906 66 ntBASIC1.49□□□□□ -2.17
TRBV4-1A0A0J9YWV2 AC073413.2-201ENST00000604332 360 ntBASIC1.49□□□□□ -2.17
TRBV4-1A0A0J9YWV2 MIR8081-201ENST00000611533 95 ntBASIC1.49□□□□□ -2.17
TRBV4-1A0A0J9YWV2 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.49□□□□□ -2.17
TRBV4-1A0A0J9YWV2 U8.2-201ENST00000363156 134 ntBASIC1.48□□□□□ -2.17
TRBV4-1A0A0J9YWV2 Y_RNA.143-201ENST00000363520 106 ntBASIC1.48□□□□□ -2.17
TRBV4-1A0A0J9YWV2 RNU6-450P-201ENST00000364654 107 ntBASIC1.48□□□□□ -2.17
TRBV4-1A0A0J9YWV2 SNORA33.2-201ENST00000365413 134 ntBASIC1.48□□□□□ -2.17
TRBV4-1A0A0J9YWV2 Y_RNA.380-201ENST00000365663 111 ntBASIC1.48□□□□□ -2.17
TRBV4-1A0A0J9YWV2 Y_RNA.389-201ENST00000383924 113 ntBASIC1.48□□□□□ -2.17
TRBV4-1A0A0J9YWV2 RNU6-505P-201ENST00000384427 107 ntBASIC1.48□□□□□ -2.17
TRBV4-1A0A0J9YWV2 MIR583-201ENST00000384846 75 ntBASIC1.48□□□□□ -2.17
TRBV4-1A0A0J9YWV2 RNU6-101P-201ENST00000410323 104 ntBASIC1.48□□□□□ -2.17
TRBV4-1A0A0J9YWV2 AC005042.3-201ENST00000453230 174 ntBASIC1.48□□□□□ -2.17
TRBV4-1A0A0J9YWV2 HMGN2P23-201ENST00000456759 269 ntBASIC1.48□□□□□ -2.17
TRBV4-1A0A0J9YWV2 snoU13.27-201ENST00000459278 104 ntBASIC1.48□□□□□ -2.17
TRBV4-1A0A0J9YWV2 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.48□□□□□ -2.17
TRBV4-1A0A0J9YWV2 RPL36AP21-201ENST00000490372 323 ntBASIC1.48□□□□□ -2.17
TRBV4-1A0A0J9YWV2 AC025465.3-201ENST00000510570 311 ntBASIC1.48□□□□□ -2.17
TRBV4-1A0A0J9YWV2 SNORA31.10-201ENST00000516482 106 ntBASIC1.48□□□□□ -2.17
TRBV4-1A0A0J9YWV2 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.48□□□□□ -2.17
TRBV4-1A0A0J9YWV2 AC136932.1-201ENST00000574771 208 ntBASIC1.48□□□□□ -2.17
TRBV4-1A0A0J9YWV2 AC091178.2-201ENST00000584401 117 ntBASIC1.48□□□□□ -2.17
TRBV4-1A0A0J9YWV2 RAC1P9-201ENST00000604990 392 ntBASIC1.48□□□□□ -2.17
TRBV4-1A0A0J9YWV2 AC016925.2-201ENST00000605108 242 ntBASIC1.48□□□□□ -2.17
TRBV4-1A0A0J9YWV2 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.48□□□□□ -2.17
TRBV4-1A0A0J9YWV2 AC040896.1-201ENST00000613819 479 ntBASIC1.48□□□□□ -2.17
TRBV4-1A0A0J9YWV2 AC127459.3-201ENST00000624328 466 ntBASIC1.48□□□□□ -2.17
TRBV4-1A0A0J9YWV2 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
TRBV4-1A0A0J9YWV2 SNORD81.1-201ENST00000363064 77 ntBASIC1.47□□□□□ -2.17
TRBV4-1A0A0J9YWV2 Y_RNA.455-201ENST00000384230 98 ntBASIC1.47□□□□□ -2.17
TRBV4-1A0A0J9YWV2 RNU6-937P-201ENST00000384325 106 ntBASIC1.47□□□□□ -2.17
TRBV4-1A0A0J9YWV2 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
TRBV4-1A0A0J9YWV2 RNU11-5P-201ENST00000391216 129 ntBASIC1.47□□□□□ -2.17
TRBV4-1A0A0J9YWV2 RPL23AP36-201ENST00000413895 458 ntBASIC1.47□□□□□ -2.17
TRBV4-1A0A0J9YWV2 AL161935.2-201ENST00000414627 60 ntBASIC1.47□□□□□ -2.17
TRBV4-1A0A0J9YWV2 AC010154.1-201ENST00000425857 269 ntBASIC1.47□□□□□ -2.17
TRBV4-1A0A0J9YWV2 FTH1P12-201ENST00000432137 551 ntBASIC1.47□□□□□ -2.17
TRBV4-1A0A0J9YWV2 JTBP1-201ENST00000441314 247 ntBASIC1.47□□□□□ -2.17
TRBV4-1A0A0J9YWV2 RNU6-1278P-201ENST00000516130 107 ntBASIC1.47□□□□□ -2.17
TRBV4-1A0A0J9YWV2 RNU6-250P-201ENST00000516958 103 ntBASIC1.47□□□□□ -2.17
TRBV4-1A0A0J9YWV2 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.47□□□□□ -2.17
TRBV4-1A0A0J9YWV2 AC011373.1-201ENST00000607270 237 ntBASIC1.47□□□□□ -2.17
TRBV4-1A0A0J9YWV2 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.47□□□□□ -2.17
TRBV4-1A0A0J9YWV2 MIR8074-201ENST00000615081 81 ntBASIC1.47□□□□□ -2.17
TRBV4-1A0A0J9YWV2 MIR6079-201ENST00000635807 62 ntBASIC1.47□□□□□ -2.17
TRBV4-1A0A0J9YWV2 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
TRBV4-1A0A0J9YWV2 Y_RNA.183-201ENST00000363882 113 ntBASIC1.46□□□□□ -2.18
TRBV4-1A0A0J9YWV2 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.46□□□□□ -2.18
TRBV4-1A0A0J9YWV2 MIR30A-201ENST00000385092 71 ntBASIC1.46□□□□□ -2.18
TRBV4-1A0A0J9YWV2 MIR634-201ENST00000385208 97 ntBASIC1.46□□□□□ -2.18
TRBV4-1A0A0J9YWV2 AC245047.3-201ENST00000429428 127 ntBASIC1.46□□□□□ -2.18
TRBV4-1A0A0J9YWV2 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.46□□□□□ -2.18
TRBV4-1A0A0J9YWV2 SNORA44.1-201ENST00000517031 108 ntBASIC1.46□□□□□ -2.18
TRBV4-1A0A0J9YWV2 RNU6-1137P-201ENST00000517073 99 ntBASIC1.46□□□□□ -2.18
TRBV4-1A0A0J9YWV2 RNU6-897P-201ENST00000517135 105 ntBASIC1.46□□□□□ -2.18
TRBV4-1A0A0J9YWV2 CBX3P4-201ENST00000538909 354 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 166 ms