Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
PCDHA9Q9Y5H5 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
PCDHA9Q9Y5H5 AC068700.1-201ENST00000565862 3754 ntBASIC2.76□□□□□ -1.97
PCDHA9Q9Y5H5 SNORA9.2-201ENST00000365361 133 ntBASIC2.76□□□□□ -1.97
PCDHA9Q9Y5H5 Y_RNA.571-201ENST00000384753 98 ntBASIC2.76□□□□□ -1.97
PCDHA9Q9Y5H5 RNA5SP511-201ENST00000410487 115 ntBASIC2.76□□□□□ -1.97
PCDHA9Q9Y5H5 HMGN2P34-201ENST00000437647 269 ntBASIC2.76□□□□□ -1.97
PCDHA9Q9Y5H5 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.76□□□□□ -1.97
PCDHA9Q9Y5H5 RN7SL499P-201ENST00000481141 276 ntBASIC2.76□□□□□ -1.97
PCDHA9Q9Y5H5 AC117454.1-201ENST00000491120 168 ntBASIC2.76□□□□□ -1.97
PCDHA9Q9Y5H5 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.76□□□□□ -1.97
PCDHA9Q9Y5H5 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.76□□□□□ -1.97
PCDHA9Q9Y5H5 RNU7-172P-201ENST00000517125 64 ntBASIC2.76□□□□□ -1.97
PCDHA9Q9Y5H5 AC107016.2-201ENST00000547968 190 ntBASIC2.76□□□□□ -1.97
PCDHA9Q9Y5H5 AC015720.1-201ENST00000565251 277 ntBASIC2.76□□□□□ -1.97
PCDHA9Q9Y5H5 POLR3GP1-201ENST00000594073 261 ntBASIC2.76□□□□□ -1.97
PCDHA9Q9Y5H5 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
PCDHA9Q9Y5H5 Y_RNA.238-201ENST00000364441 102 ntBASIC2.75□□□□□ -1.97
PCDHA9Q9Y5H5 MIR512-1-201ENST00000384913 84 ntBASIC2.75□□□□□ -1.97
PCDHA9Q9Y5H5 RNU6-381P-201ENST00000391259 108 ntBASIC2.75□□□□□ -1.97
PCDHA9Q9Y5H5 AL603908.1-201ENST00000406098 201 ntBASIC2.75□□□□□ -1.97
PCDHA9Q9Y5H5 SNORA36B-201ENST00000410438 131 ntBASIC2.75□□□□□ -1.97
PCDHA9Q9Y5H5 RN7SKP164-201ENST00000516138 266 ntBASIC2.75□□□□□ -1.97
PCDHA9Q9Y5H5 RNA5SP341-201ENST00000516261 117 ntBASIC2.75□□□□□ -1.97
PCDHA9Q9Y5H5 RNU6-63P-201ENST00000516690 95 ntBASIC2.75□□□□□ -1.97
PCDHA9Q9Y5H5 AC127455.1-201ENST00000565496 145 ntBASIC2.75□□□□□ -1.97
PCDHA9Q9Y5H5 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.75□□□□□ -1.97
PCDHA9Q9Y5H5 AC096644.4-201ENST00000563417 2912 ntBASIC2.75□□□□□ -1.97
PCDHA9Q9Y5H5 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.74□□□□□ -1.97
PCDHA9Q9Y5H5 SNORA38-201ENST00000363946 132 ntBASIC2.74□□□□□ -1.97
PCDHA9Q9Y5H5 SNORA70.4-201ENST00000365509 134 ntBASIC2.74□□□□□ -1.97
PCDHA9Q9Y5H5 RNU6-851P-201ENST00000384565 107 ntBASIC2.74□□□□□ -1.97
PCDHA9Q9Y5H5 RNU11-5P-201ENST00000391216 129 ntBASIC2.74□□□□□ -1.97
PCDHA9Q9Y5H5 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.74□□□□□ -1.97
PCDHA9Q9Y5H5 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.74□□□□□ -1.97
PCDHA9Q9Y5H5 SCGB1D5P-201ENST00000515134 247 ntBASIC2.74□□□□□ -1.97
PCDHA9Q9Y5H5 RPPH1-2P-201ENST00000516688 293 ntBASIC2.74□□□□□ -1.97
PCDHA9Q9Y5H5 LARP7P3-201ENST00000579888 337 ntBASIC2.74□□□□□ -1.97
PCDHA9Q9Y5H5 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.74□□□□□ -1.97
PCDHA9Q9Y5H5 MIR338-201ENST00000636369 67 ntBASIC2.74□□□□□ -1.97
PCDHA9Q9Y5H5 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
PCDHA9Q9Y5H5 RNU6-103P-201ENST00000363686 107 ntBASIC2.73□□□□□ -1.97
PCDHA9Q9Y5H5 RNU4-13P-201ENST00000364019 141 ntBASIC2.73□□□□□ -1.97
PCDHA9Q9Y5H5 RNU6-417P-201ENST00000384712 107 ntBASIC2.73□□□□□ -1.97
PCDHA9Q9Y5H5 MIR29C-201ENST00000385231 88 ntBASIC2.73□□□□□ -1.97
PCDHA9Q9Y5H5 RNA5SP492-201ENST00000411330 114 ntBASIC2.73□□□□□ -1.97
PCDHA9Q9Y5H5 AC022018.1-201ENST00000430685 241 ntBASIC2.73□□□□□ -1.97
PCDHA9Q9Y5H5 ATP5J2P3-201ENST00000451550 258 ntBASIC2.73□□□□□ -1.97
PCDHA9Q9Y5H5 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.73□□□□□ -1.97
PCDHA9Q9Y5H5 RPS29P21-201ENST00000496272 170 ntBASIC2.73□□□□□ -1.97
PCDHA9Q9Y5H5 RNU6-1041P-201ENST00000516254 102 ntBASIC2.73□□□□□ -1.97
PCDHA9Q9Y5H5 RNU7-99P-201ENST00000516271 62 ntBASIC2.73□□□□□ -1.97
PCDHA9Q9Y5H5 RNU6-1212P-201ENST00000517023 104 ntBASIC2.73□□□□□ -1.97
PCDHA9Q9Y5H5 MIR4724-201ENST00000579485 89 ntBASIC2.73□□□□□ -1.97
PCDHA9Q9Y5H5 MIR4325-201ENST00000583049 90 ntBASIC2.73□□□□□ -1.97
PCDHA9Q9Y5H5 AC007229.1-201ENST00000590455 412 ntBASIC2.73□□□□□ -1.97
PCDHA9Q9Y5H5 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.73□□□□□ -1.97
PCDHA9Q9Y5H5 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
PCDHA9Q9Y5H5 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.72□□□□□ -1.97
PCDHA9Q9Y5H5 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
PCDHA9Q9Y5H5 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
PCDHA9Q9Y5H5 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PCDHA9Q9Y5H5 RNU6-674P-201ENST00000363831 107 ntBASIC2.72□□□□□ -1.97
PCDHA9Q9Y5H5 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.72□□□□□ -1.97
PCDHA9Q9Y5H5 SNORA72-201ENST00000384339 132 ntBASIC2.72□□□□□ -1.97
PCDHA9Q9Y5H5 RNU1-148P-201ENST00000384472 162 ntBASIC2.72□□□□□ -1.97
PCDHA9Q9Y5H5 EBAG9P1-201ENST00000418955 543 ntBASIC2.72□□□□□ -1.97
PCDHA9Q9Y5H5 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.72□□□□□ -1.97
PCDHA9Q9Y5H5 RPL39P40-201ENST00000445481 146 ntBASIC2.72□□□□□ -1.97
PCDHA9Q9Y5H5 RNU6-1219P-201ENST00000516143 112 ntBASIC2.72□□□□□ -1.97
PCDHA9Q9Y5H5 MRPS18CP4-201ENST00000535821 231 ntBASIC2.72□□□□□ -1.97
PCDHA9Q9Y5H5 MIR3126-201ENST00000577443 74 ntBASIC2.72□□□□□ -1.97
PCDHA9Q9Y5H5 AL162274.2-201ENST00000614406 332 ntBASIC2.72□□□□□ -1.97
PCDHA9Q9Y5H5 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
PCDHA9Q9Y5H5 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.72□□□□□ -1.97
PCDHA9Q9Y5H5 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
PCDHA9Q9Y5H5 MIR367-201ENST00000362299 68 ntBASIC2.71□□□□□ -1.98
PCDHA9Q9Y5H5 Y_RNA.24-201ENST00000362508 103 ntBASIC2.71□□□□□ -1.98
PCDHA9Q9Y5H5 Y_RNA.75-201ENST00000362927 97 ntBASIC2.71□□□□□ -1.98
PCDHA9Q9Y5H5 RNA5SP493-201ENST00000364115 91 ntBASIC2.71□□□□□ -1.98
PCDHA9Q9Y5H5 RNU4-10P-201ENST00000364383 140 ntBASIC2.71□□□□□ -1.98
PCDHA9Q9Y5H5 RNU6-1164P-201ENST00000364428 107 ntBASIC2.71□□□□□ -1.98
PCDHA9Q9Y5H5 RNU6-312P-201ENST00000364629 107 ntBASIC2.71□□□□□ -1.98
PCDHA9Q9Y5H5 RNU6-376P-201ENST00000384731 106 ntBASIC2.71□□□□□ -1.98
PCDHA9Q9Y5H5 MIR515-2-201ENST00000384883 83 ntBASIC2.71□□□□□ -1.98
PCDHA9Q9Y5H5 MIR515-1-201ENST00000384884 83 ntBASIC2.71□□□□□ -1.98
PCDHA9Q9Y5H5 RNU2-2P-201ENST00000410396 191 ntBASIC2.71□□□□□ -1.98
PCDHA9Q9Y5H5 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.71□□□□□ -1.98
PCDHA9Q9Y5H5 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.71□□□□□ -1.98
PCDHA9Q9Y5H5 RPS15AP28-201ENST00000435088 386 ntBASIC2.71□□□□□ -1.98
PCDHA9Q9Y5H5 AC018634.1-201ENST00000437554 401 ntBASIC2.71□□□□□ -1.98
PCDHA9Q9Y5H5 SNORA9.3-201ENST00000516383 129 ntBASIC2.71□□□□□ -1.98
PCDHA9Q9Y5H5 SNORA70.24-201ENST00000517233 118 ntBASIC2.71□□□□□ -1.98
PCDHA9Q9Y5H5 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.71□□□□□ -1.98
PCDHA9Q9Y5H5 RNU2-4P-201ENST00000606190 192 ntBASIC2.71□□□□□ -1.98
PCDHA9Q9Y5H5 AL365434.2-201ENST00000607979 234 ntBASIC2.71□□□□□ -1.98
PCDHA9Q9Y5H5 AL359075.3-201ENST00000613288 217 ntBASIC2.71□□□□□ -1.98
PCDHA9Q9Y5H5 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
PCDHA9Q9Y5H5 Y_RNA.333-201ENST00000365274 102 ntBASIC2.7□□□□□ -1.98
PCDHA9Q9Y5H5 RNU6-969P-201ENST00000383900 105 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 287.5 ms