Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
SHANK1Q9Y566 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC0.97□□□□□ -2.25
SHANK1Q9Y566 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC0.97□□□□□ -2.25
SHANK1Q9Y566 RNU7-14P-201ENST00000459331 62 ntBASIC0.97□□□□□ -2.25
SHANK1Q9Y566 RNU7-94P-201ENST00000459576 63 ntBASIC0.97□□□□□ -2.25
SHANK1Q9Y566 SNORA40.9-201ENST00000515895 93 ntBASIC0.97□□□□□ -2.25
SHANK1Q9Y566 RNU6-948P-201ENST00000516374 107 ntBASIC0.97□□□□□ -2.25
SHANK1Q9Y566 RNU6-875P-201ENST00000516488 106 ntBASIC0.97□□□□□ -2.25
SHANK1Q9Y566 MIR4714-201ENST00000580728 77 ntBASIC0.97□□□□□ -2.25
SHANK1Q9Y566 MIR548S-201ENST00000581352 82 ntBASIC0.97□□□□□ -2.25
SHANK1Q9Y566 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.97□□□□□ -2.25
SHANK1Q9Y566 Y_RNA.160-201ENST00000363677 92 ntBASIC0.96□□□□□ -2.26
SHANK1Q9Y566 RNU6-1164P-201ENST00000364428 107 ntBASIC0.96□□□□□ -2.26
SHANK1Q9Y566 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
SHANK1Q9Y566 AL358176.2-201ENST00000425769 204 ntBASIC0.96□□□□□ -2.26
SHANK1Q9Y566 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.96□□□□□ -2.26
SHANK1Q9Y566 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.96□□□□□ -2.26
SHANK1Q9Y566 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.96□□□□□ -2.26
SHANK1Q9Y566 RN7SKP179-201ENST00000516126 217 ntBASIC0.96□□□□□ -2.26
SHANK1Q9Y566 RNU6-1278P-201ENST00000516130 107 ntBASIC0.96□□□□□ -2.26
SHANK1Q9Y566 SNORA25.14-201ENST00000516481 132 ntBASIC0.96□□□□□ -2.26
SHANK1Q9Y566 AC023442.1-201ENST00000531247 422 ntBASIC0.96□□□□□ -2.26
SHANK1Q9Y566 RRN3P3-201ENST00000549207 578 ntBASIC0.96□□□□□ -2.26
SHANK1Q9Y566 MIR5094-201ENST00000578766 85 ntBASIC0.96□□□□□ -2.26
SHANK1Q9Y566 AL117336.2-201ENST00000602435 335 ntBASIC0.96□□□□□ -2.26
SHANK1Q9Y566 SNORD11B-201ENST00000607707 90 ntBASIC0.96□□□□□ -2.26
SHANK1Q9Y566 AC010487.4-201ENST00000637027 61 ntBASIC0.96□□□□□ -2.26
SHANK1Q9Y566 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
SHANK1Q9Y566 MIR340-201ENST00000362125 95 ntBASIC0.96□□□□□ -2.26
SHANK1Q9Y566 RNU1-115P-201ENST00000365329 160 ntBASIC0.96□□□□□ -2.26
SHANK1Q9Y566 Y_RNA.361-201ENST00000365515 120 ntBASIC0.96□□□□□ -2.26
SHANK1Q9Y566 RNU6-793P-201ENST00000384233 104 ntBASIC0.96□□□□□ -2.26
SHANK1Q9Y566 RNA5SP467-201ENST00000391274 118 ntBASIC0.96□□□□□ -2.26
SHANK1Q9Y566 RNU6-101P-201ENST00000410323 104 ntBASIC0.96□□□□□ -2.26
SHANK1Q9Y566 RNA5SP501-201ENST00000410990 112 ntBASIC0.96□□□□□ -2.26
SHANK1Q9Y566 MTCO2P27-201ENST00000420740 428 ntBASIC0.96□□□□□ -2.26
SHANK1Q9Y566 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.96□□□□□ -2.26
SHANK1Q9Y566 SNORA70.12-201ENST00000516084 153 ntBASIC0.96□□□□□ -2.26
SHANK1Q9Y566 RNU6-856P-201ENST00000516959 98 ntBASIC0.96□□□□□ -2.26
SHANK1Q9Y566 RNA5SP437-201ENST00000517249 129 ntBASIC0.96□□□□□ -2.26
SHANK1Q9Y566 AC022616.4-201ENST00000522985 181 ntBASIC0.96□□□□□ -2.26
SHANK1Q9Y566 AC024995.1-201ENST00000523014 93 ntBASIC0.96□□□□□ -2.26
SHANK1Q9Y566 SNORD58B-201ENST00000607313 66 ntBASIC0.96□□□□□ -2.26
SHANK1Q9Y566 AL627230.6-201ENST00000611129 280 ntBASIC0.96□□□□□ -2.26
SHANK1Q9Y566 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.96□□□□□ -2.26
SHANK1Q9Y566 AC099654.5-201ENST00000636479 350 ntBASIC0.96□□□□□ -2.26
SHANK1Q9Y566 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.96□□□□□ -2.26
SHANK1Q9Y566 ZNF702P-202ENST00000434269 1966 ntBASIC0.95□□□□□ -2.26
SHANK1Q9Y566 SNORD115-30-201ENST00000364117 82 ntBASIC0.95□□□□□ -2.26
SHANK1Q9Y566 Y_RNA.259-201ENST00000364619 101 ntBASIC0.95□□□□□ -2.26
SHANK1Q9Y566 RNU6-1145P-201ENST00000384246 107 ntBASIC0.95□□□□□ -2.26
SHANK1Q9Y566 MIR329-1-201ENST00000385028 80 ntBASIC0.95□□□□□ -2.26
SHANK1Q9Y566 MIR1267-201ENST00000408723 78 ntBASIC0.95□□□□□ -2.26
SHANK1Q9Y566 PDCL2P1-201ENST00000419302 352 ntBASIC0.95□□□□□ -2.26
SHANK1Q9Y566 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.95□□□□□ -2.26
SHANK1Q9Y566 MTND4P28-201ENST00000426217 387 ntBASIC0.95□□□□□ -2.26
SHANK1Q9Y566 RPL23AP50-201ENST00000434149 455 ntBASIC0.95□□□□□ -2.26
SHANK1Q9Y566 AC236972.2-201ENST00000434979 310 ntBASIC0.95□□□□□ -2.26
SHANK1Q9Y566 RPS27P22-201ENST00000478056 241 ntBASIC0.95□□□□□ -2.26
SHANK1Q9Y566 RNU6-559P-201ENST00000516151 98 ntBASIC0.95□□□□□ -2.26
SHANK1Q9Y566 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC0.95□□□□□ -2.26
SHANK1Q9Y566 AC018448.1-201ENST00000552843 316 ntBASIC0.95□□□□□ -2.26
SHANK1Q9Y566 AL355375.2-201ENST00000574825 175 ntBASIC0.95□□□□□ -2.26
SHANK1Q9Y566 AC022441.3-201ENST00000605737 136 ntBASIC0.95□□□□□ -2.26
SHANK1Q9Y566 MIR1244-1-201ENST00000612829 85 ntBASIC0.95□□□□□ -2.26
SHANK1Q9Y566 AC063943.3-201ENST00000615562 356 ntBASIC0.95□□□□□ -2.26
SHANK1Q9Y566 AC006001.4-201ENST00000622243 395 ntBASIC0.95□□□□□ -2.26
SHANK1Q9Y566 MIR1244-3-201ENST00000635744 85 ntBASIC0.95□□□□□ -2.26
SHANK1Q9Y566 MIR1244-2-201ENST00000636449 85 ntBASIC0.95□□□□□ -2.26
SHANK1Q9Y566 MIR1244-4-202ENST00000636813 85 ntBASIC0.95□□□□□ -2.26
SHANK1Q9Y566 AC018630.2-201ENST00000534866 2403 ntBASIC0.95□□□□□ -2.26
SHANK1Q9Y566 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
SHANK1Q9Y566 MTND4P12-201ENST00000498999 1377 ntBASIC0.95□□□□□ -2.26
SHANK1Q9Y566 RNU6-1240P-201ENST00000365155 104 ntBASIC0.94□□□□□ -2.26
SHANK1Q9Y566 RNU6-505P-201ENST00000384427 107 ntBASIC0.94□□□□□ -2.26
SHANK1Q9Y566 Y_RNA.496-201ENST00000384444 101 ntBASIC0.94□□□□□ -2.26
SHANK1Q9Y566 MIR562-201ENST00000384894 95 ntBASIC0.94□□□□□ -2.26
SHANK1Q9Y566 RNU6-700P-201ENST00000391043 107 ntBASIC0.94□□□□□ -2.26
SHANK1Q9Y566 RNU6-876P-201ENST00000391295 104 ntBASIC0.94□□□□□ -2.26
SHANK1Q9Y566 RNU6-57P-201ENST00000411348 103 ntBASIC0.94□□□□□ -2.26
SHANK1Q9Y566 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.94□□□□□ -2.26
SHANK1Q9Y566 MIR2053-201ENST00000459295 91 ntBASIC0.94□□□□□ -2.26
SHANK1Q9Y566 RNU6-221P-201ENST00000459541 99 ntBASIC0.94□□□□□ -2.26
SHANK1Q9Y566 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.94□□□□□ -2.26
SHANK1Q9Y566 AC097462.1-201ENST00000514125 324 ntBASIC0.94□□□□□ -2.26
SHANK1Q9Y566 RNU6-1213P-201ENST00000517075 94 ntBASIC0.94□□□□□ -2.26
SHANK1Q9Y566 AC144568.1-201ENST00000520139 137 ntBASIC0.94□□□□□ -2.26
SHANK1Q9Y566 AC233702.2-202ENST00000562547 291 ntBASIC0.94□□□□□ -2.26
SHANK1Q9Y566 MIR3684-201ENST00000579779 74 ntBASIC0.94□□□□□ -2.26
SHANK1Q9Y566 AL162424.1-201ENST00000602325 221 ntBASIC0.94□□□□□ -2.26
SHANK1Q9Y566 AC108706.1-201ENST00000611053 297 ntBASIC0.94□□□□□ -2.26
SHANK1Q9Y566 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.94□□□□□ -2.26
SHANK1Q9Y566 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.94□□□□□ -2.26
SHANK1Q9Y566 RNU6-545P-201ENST00000362681 104 ntBASIC0.94□□□□□ -2.26
SHANK1Q9Y566 Y_RNA.99-201ENST00000363138 105 ntBASIC0.94□□□□□ -2.26
SHANK1Q9Y566 Y_RNA.115-201ENST00000363272 98 ntBASIC0.94□□□□□ -2.26
SHANK1Q9Y566 RNU6-414P-201ENST00000363705 104 ntBASIC0.94□□□□□ -2.26
SHANK1Q9Y566 Y_RNA.364-201ENST00000365532 101 ntBASIC0.94□□□□□ -2.26
SHANK1Q9Y566 Y_RNA.387-201ENST00000383918 102 ntBASIC0.94□□□□□ -2.26
SHANK1Q9Y566 RNU6-418P-201ENST00000384035 107 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms