Protein–RNA interactions for Protein: Q9Y3B2

EXOSC1, Exosome complex component CSL4, humanhuman

Known RBP Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1Q9Y3B2 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.2□□□□□ -2.22
EXOSC1Q9Y3B2 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.2□□□□□ -2.22
EXOSC1Q9Y3B2 SNORA40.9-201ENST00000515895 93 ntBASIC1.2□□□□□ -2.22
EXOSC1Q9Y3B2 RNU6-120P-201ENST00000516077 103 ntBASIC1.2□□□□□ -2.22
EXOSC1Q9Y3B2 RNU6-264P-201ENST00000517134 104 ntBASIC1.2□□□□□ -2.22
EXOSC1Q9Y3B2 SUMO2P16-201ENST00000519475 264 ntBASIC1.2□□□□□ -2.22
EXOSC1Q9Y3B2 AP003033.1-201ENST00000527244 415 ntBASIC1.2□□□□□ -2.22
EXOSC1Q9Y3B2 MIR5690-201ENST00000583739 73 ntBASIC1.2□□□□□ -2.22
EXOSC1Q9Y3B2 PRR13P7-201ENST00000605538 430 ntBASIC1.2□□□□□ -2.22
EXOSC1Q9Y3B2 AL021879.1-201ENST00000611756 288 ntBASIC1.2□□□□□ -2.22
EXOSC1Q9Y3B2 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.2□□□□□ -2.22
EXOSC1Q9Y3B2 AC091812.1-201ENST00000432235 1948 ntBASIC1.2□□□□□ -2.22
EXOSC1Q9Y3B2 MIR26B-201ENST00000362251 77 ntBASIC1.19□□□□□ -2.22
EXOSC1Q9Y3B2 RNU6-1301P-201ENST00000362724 104 ntBASIC1.19□□□□□ -2.22
EXOSC1Q9Y3B2 RNU4-13P-201ENST00000364019 141 ntBASIC1.19□□□□□ -2.22
EXOSC1Q9Y3B2 RNU6-60P-201ENST00000364792 103 ntBASIC1.19□□□□□ -2.22
EXOSC1Q9Y3B2 SNORD26-201ENST00000384147 75 ntBASIC1.19□□□□□ -2.22
EXOSC1Q9Y3B2 RNU6-310P-201ENST00000384655 107 ntBASIC1.19□□□□□ -2.22
EXOSC1Q9Y3B2 Y_RNA.577-201ENST00000384794 101 ntBASIC1.19□□□□□ -2.22
EXOSC1Q9Y3B2 MIR625-201ENST00000385047 85 ntBASIC1.19□□□□□ -2.22
EXOSC1Q9Y3B2 RNU11-5P-201ENST00000391216 129 ntBASIC1.19□□□□□ -2.22
EXOSC1Q9Y3B2 SNORA75.6-201ENST00000391318 127 ntBASIC1.19□□□□□ -2.22
EXOSC1Q9Y3B2 SNORD12B-201ENST00000410433 91 ntBASIC1.19□□□□□ -2.22
EXOSC1Q9Y3B2 RNA5SP475-201ENST00000410568 110 ntBASIC1.19□□□□□ -2.22
EXOSC1Q9Y3B2 AC018865.2-201ENST00000423631 129 ntBASIC1.19□□□□□ -2.22
EXOSC1Q9Y3B2 AL591806.2-201ENST00000433122 173 ntBASIC1.19□□□□□ -2.22
EXOSC1Q9Y3B2 PGBD4P5-201ENST00000445958 426 ntBASIC1.19□□□□□ -2.22
EXOSC1Q9Y3B2 AC022493.2-201ENST00000506122 481 ntBASIC1.19□□□□□ -2.22
EXOSC1Q9Y3B2 PRDX4P1-201ENST00000507189 574 ntBASIC1.19□□□□□ -2.22
EXOSC1Q9Y3B2 RNA5SP20-201ENST00000515976 84 ntBASIC1.19□□□□□ -2.22
EXOSC1Q9Y3B2 MIR2355-201ENST00000517199 87 ntBASIC1.19□□□□□ -2.22
EXOSC1Q9Y3B2 AP002001.1-203ENST00000534002 267 ntBASIC1.19□□□□□ -2.22
EXOSC1Q9Y3B2 RPL21P9-201ENST00000556149 474 ntBASIC1.19□□□□□ -2.22
EXOSC1Q9Y3B2 AC015720.1-201ENST00000565251 277 ntBASIC1.19□□□□□ -2.22
EXOSC1Q9Y3B2 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
EXOSC1Q9Y3B2 AC080078.3-201ENST00000605407 463 ntBASIC1.19□□□□□ -2.22
EXOSC1Q9Y3B2 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.19□□□□□ -2.22
EXOSC1Q9Y3B2 MIR6079-201ENST00000635807 62 ntBASIC1.19□□□□□ -2.22
EXOSC1Q9Y3B2 MIR3674-201ENST00000636576 68 ntBASIC1.19□□□□□ -2.22
EXOSC1Q9Y3B2 ZNF72P-201ENST00000425869 1908 ntBASIC1.19□□□□□ -2.22
EXOSC1Q9Y3B2 SNORA27.1-201ENST00000362604 124 ntBASIC1.18□□□□□ -2.22
EXOSC1Q9Y3B2 SNORA69.1-201ENST00000390904 137 ntBASIC1.18□□□□□ -2.22
EXOSC1Q9Y3B2 RNU6-1156P-201ENST00000410365 100 ntBASIC1.18□□□□□ -2.22
EXOSC1Q9Y3B2 RBMX2P4-201ENST00000441256 376 ntBASIC1.18□□□□□ -2.22
EXOSC1Q9Y3B2 STAG3L5P-204ENST00000443759 179 ntBASIC1.18□□□□□ -2.22
EXOSC1Q9Y3B2 SNORD13-201ENST00000459299 104 ntBASIC1.18□□□□□ -2.22
EXOSC1Q9Y3B2 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.18□□□□□ -2.22
EXOSC1Q9Y3B2 RN7SKP179-201ENST00000516126 217 ntBASIC1.18□□□□□ -2.22
EXOSC1Q9Y3B2 RNU6-559P-201ENST00000516151 98 ntBASIC1.18□□□□□ -2.22
EXOSC1Q9Y3B2 SNORA20.3-201ENST00000516880 132 ntBASIC1.18□□□□□ -2.22
EXOSC1Q9Y3B2 SUB1P3-201ENST00000564581 315 ntBASIC1.18□□□□□ -2.22
EXOSC1Q9Y3B2 AL162424.1-201ENST00000602325 221 ntBASIC1.18□□□□□ -2.22
EXOSC1Q9Y3B2 AC113139.1-201ENST00000605049 239 ntBASIC1.18□□□□□ -2.22
EXOSC1Q9Y3B2 AC005828.6-201ENST00000606610 232 ntBASIC1.18□□□□□ -2.22
EXOSC1Q9Y3B2 AC099654.14-201ENST00000638599 341 ntBASIC1.18□□□□□ -2.22
EXOSC1Q9Y3B2 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
EXOSC1Q9Y3B2 RNU6-454P-201ENST00000364292 107 ntBASIC1.17□□□□□ -2.22
EXOSC1Q9Y3B2 RNU6-890P-201ENST00000384121 107 ntBASIC1.17□□□□□ -2.22
EXOSC1Q9Y3B2 Y_RNA.474-201ENST00000384341 102 ntBASIC1.17□□□□□ -2.22
EXOSC1Q9Y3B2 RNU6-376P-201ENST00000384731 106 ntBASIC1.17□□□□□ -2.22
EXOSC1Q9Y3B2 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.17□□□□□ -2.22
EXOSC1Q9Y3B2 AC138393.2-201ENST00000414742 246 ntBASIC1.17□□□□□ -2.22
EXOSC1Q9Y3B2 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.17□□□□□ -2.22
EXOSC1Q9Y3B2 MTND4P28-201ENST00000426217 387 ntBASIC1.17□□□□□ -2.22
EXOSC1Q9Y3B2 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.17□□□□□ -2.22
EXOSC1Q9Y3B2 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.17□□□□□ -2.22
EXOSC1Q9Y3B2 RPL30P7-201ENST00000479312 323 ntBASIC1.17□□□□□ -2.22
EXOSC1Q9Y3B2 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.17□□□□□ -2.22
EXOSC1Q9Y3B2 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.17□□□□□ -2.22
EXOSC1Q9Y3B2 AL512310.8-201ENST00000550183 120 ntBASIC1.17□□□□□ -2.22
EXOSC1Q9Y3B2 AL355073.2-201ENST00000612106 557 ntBASIC1.17□□□□□ -2.22
EXOSC1Q9Y3B2 AC073349.3-201ENST00000617616 186 ntBASIC1.17□□□□□ -2.22
EXOSC1Q9Y3B2 AC087588.2-201ENST00000617667 426 ntBASIC1.17□□□□□ -2.22
EXOSC1Q9Y3B2 U6.115-201ENST00000636045 103 ntBASIC1.17□□□□□ -2.22
EXOSC1Q9Y3B2 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
EXOSC1Q9Y3B2 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
EXOSC1Q9Y3B2 Y_RNA.592-201ENST00000410274 109 ntBASIC1.16□□□□□ -2.22
EXOSC1Q9Y3B2 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.16□□□□□ -2.22
EXOSC1Q9Y3B2 RPL30P13-201ENST00000418873 348 ntBASIC1.16□□□□□ -2.22
EXOSC1Q9Y3B2 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.16□□□□□ -2.22
EXOSC1Q9Y3B2 RPL30P15-201ENST00000457129 321 ntBASIC1.16□□□□□ -2.22
EXOSC1Q9Y3B2 Y_RNA.653-201ENST00000459091 95 ntBASIC1.16□□□□□ -2.22
EXOSC1Q9Y3B2 AC091021.1-201ENST00000468051 388 ntBASIC1.16□□□□□ -2.22
EXOSC1Q9Y3B2 AC108210.2-201ENST00000503681 201 ntBASIC1.16□□□□□ -2.22
EXOSC1Q9Y3B2 AC105758.1-201ENST00000506038 399 ntBASIC1.16□□□□□ -2.22
EXOSC1Q9Y3B2 RAB11AP2-201ENST00000545905 639 ntBASIC1.16□□□□□ -2.22
EXOSC1Q9Y3B2 CYP3A52P-201ENST00000563326 91 ntBASIC1.16□□□□□ -2.22
EXOSC1Q9Y3B2 SNORA28-201ENST00000606769 126 ntBASIC1.16□□□□□ -2.22
EXOSC1Q9Y3B2 AL513423.1-201ENST00000621695 132 ntBASIC1.16□□□□□ -2.22
EXOSC1Q9Y3B2 SNORD3E-202ENST00000627253 216 ntBASIC1.16□□□□□ -2.22
EXOSC1Q9Y3B2 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
EXOSC1Q9Y3B2 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.15□□□□□ -2.23
EXOSC1Q9Y3B2 Y_RNA.265-201ENST00000364677 108 ntBASIC1.15□□□□□ -2.23
EXOSC1Q9Y3B2 Y_RNA.267-201ENST00000364679 109 ntBASIC1.15□□□□□ -2.23
EXOSC1Q9Y3B2 RNU6-1310P-201ENST00000384153 107 ntBASIC1.15□□□□□ -2.23
EXOSC1Q9Y3B2 MIR873-201ENST00000401120 77 ntBASIC1.15□□□□□ -2.23
EXOSC1Q9Y3B2 MTCO3P10-201ENST00000455912 772 ntBASIC1.15□□□□□ -2.23
EXOSC1Q9Y3B2 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.15□□□□□ -2.23
EXOSC1Q9Y3B2 snoU13.23-201ENST00000458863 104 ntBASIC1.15□□□□□ -2.23
EXOSC1Q9Y3B2 RNU6-408P-201ENST00000515910 100 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms